RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
PCCB-219ENST00000494742 KDRP35968 1356 aa20.13■□□□□ 0.81
PCCB-219ENST00000494742 SMIM5Q71RC9 77 aa20.13■□□□□ 0.81
PCCB-219ENST00000494742 DCAF5Q96JK2 942 aa20.13■□□□□ 0.81
PCCB-219ENST00000494742 GPBP1L1Q9HC44 474 aaPredicted RBP20.13■□□□□ 0.81
PCCB-219ENST00000494742 KIF13BQ9NQT8 1826 aa20.13■□□□□ 0.81
PCCB-219ENST00000494742 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
PCCB-219ENST00000494742 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
PCCB-219ENST00000494742 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
PCCB-219ENST00000494742 CICQ96RK0 1608 aaPredicted RBP20.1■□□□□ 0.81
PCCB-219ENST00000494742 ADRA2BP18089 450 aa20.1■□□□□ 0.81
PCCB-219ENST00000494742 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
PCCB-219ENST00000494742 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
PCCB-219ENST00000494742 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
PCCB-219ENST00000494742 TRAPPC3LQ5T215 181 aa20.1■□□□□ 0.81
PCCB-219ENST00000494742 NLGN1Q8N2Q7 840 aa20.1■□□□□ 0.81
PCCB-219ENST00000494742 MMP10P09238 476 aa20.09■□□□□ 0.81
PCCB-219ENST00000494742 EIF4G2P78344 907 aaKnown RBP eCLIP20.09■□□□□ 0.81
PCCB-219ENST00000494742 POLR3GLQ9BT43 218 aa20.09■□□□□ 0.81
PCCB-219ENST00000494742 TGFB2P61812 414 aa20.08■□□□□ 0.81
PCCB-219ENST00000494742 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
PCCB-219ENST00000494742 PANK3Q9H999 370 aa20.07■□□□□ 0.8
PCCB-219ENST00000494742 KIAA1551Q9HCM1 1747 aa20.07■□□□□ 0.8
PCCB-219ENST00000494742 SLC4A9Q96Q91 983 aa20.06■□□□□ 0.8
PCCB-219ENST00000494742 RBM42Q9BTD8 480 aaKnown RBP20.06■□□□□ 0.8
PCCB-219ENST00000494742 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
PCCB-219ENST00000494742 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
PCCB-219ENST00000494742 RPS6KA4O75676 772 aa20.05■□□□□ 0.8
PCCB-219ENST00000494742 CABP4P57796 275 aa20.05■□□□□ 0.8
PCCB-219ENST00000494742 ZNF530Q6P9A1 599 aaPredicted RBP20.05■□□□□ 0.8
PCCB-219ENST00000494742 C10orf71Q711Q0 1435 aa20.04■□□□□ 0.8
PCCB-219ENST00000494742 ARHGEF1Q92888 912 aaKnown RBP20.04■□□□□ 0.8
PCCB-219ENST00000494742 C4AP0C0L4 1744 aa20.04■□□□□ 0.8
PCCB-219ENST00000494742 RFC4P35249 363 aa20.03■□□□□ 0.8
PCCB-219ENST00000494742 MTHFSP49914 203 aa20.03■□□□□ 0.8
PCCB-219ENST00000494742 CCDC87Q9NVE4 849 aa20.03■□□□□ 0.8
PCCB-219ENST00000494742 N4BP2Q86UW6 1770 aaPredicted RBP20.03■□□□□ 0.8
PCCB-219ENST00000494742 CEP350Q5VT06 3117 aa20.02■□□□□ 0.8
PCCB-219ENST00000494742 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
PCCB-219ENST00000494742 GYS1P13807 737 aa20.02■□□□□ 0.8
PCCB-219ENST00000494742 HSPA6P17066 643 aa20.02■□□□□ 0.8
PCCB-219ENST00000494742 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
PCCB-219ENST00000494742 MORC1Q86VD1 984 aa20.02■□□□□ 0.8
PCCB-219ENST00000494742 ZNF526Q8TF50 670 aaPredicted RBP20.02■□□□□ 0.8
PCCB-219ENST00000494742 WWC3Q9ULE0 1092 aa20.02■□□□□ 0.8
PCCB-219ENST00000494742 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
PCCB-219ENST00000494742 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
PCCB-219ENST00000494742 PARP3Q9Y6F1 533 aa20■□□□□ 0.79
PCCB-219ENST00000494742 BRCA1P38398 1863 aaKnown RBP20■□□□□ 0.79
PCCB-219ENST00000494742 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
PCCB-219ENST00000494742 A0A0G2JLW4 131 aa19.98■□□□□ 0.79
PCCB-219ENST00000494742 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
PCCB-219ENST00000494742 NFATC2IPQ8NCF5 419 aa19.98■□□□□ 0.79
PCCB-219ENST00000494742 BCS1LQ9Y276 419 aa19.98■□□□□ 0.79
PCCB-219ENST00000494742 TJP1Q07157 1748 aa19.97■□□□□ 0.79
PCCB-219ENST00000494742 KIF3CO14782 793 aa19.97■□□□□ 0.79
PCCB-219ENST00000494742 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
PCCB-219ENST00000494742 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
PCCB-219ENST00000494742 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
PCCB-219ENST00000494742 ARFGEF1Q9Y6D6 1849 aa19.97■□□□□ 0.79
PCCB-219ENST00000494742 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
PCCB-219ENST00000494742 DPEP1P16444 411 aa19.95■□□□□ 0.78
PCCB-219ENST00000494742 IL13P35225 146 aa19.95■□□□□ 0.78
PCCB-219ENST00000494742 FCHSD2O94868 740 aa19.94■□□□□ 0.78
PCCB-219ENST00000494742 AKAP4Q5JQC9 854 aa19.94■□□□□ 0.78
PCCB-219ENST00000494742 IFFO2Q5TF58 517 aa19.94■□□□□ 0.78
PCCB-219ENST00000494742 ARHGAP27Q6ZUM4 889 aa19.94■□□□□ 0.78
PCCB-219ENST00000494742 USP42Q9H9J4 1324 aaKnown RBP19.94■□□□□ 0.78
PCCB-219ENST00000494742 ADAMTS7Q9UKP4 1686 aa19.92■□□□□ 0.78
PCCB-219ENST00000494742 KCNA3P22001 575 aa19.92■□□□□ 0.78
PCCB-219ENST00000494742 PIM2Q9P1W9 311 aa19.92■□□□□ 0.78
PCCB-219ENST00000494742 TOMM70O94826 608 aa19.91■□□□□ 0.78
PCCB-219ENST00000494742 FKBP8Q14318 412 aa19.9■□□□□ 0.78
PCCB-219ENST00000494742 AMER1Q5JTC6 1135 aaPredicted RBP19.9■□□□□ 0.78
PCCB-219ENST00000494742 INTS5Q6P9B9 1019 aaKnown RBP19.9■□□□□ 0.78
PCCB-219ENST00000494742 SLC52A2Q9HAB3 445 aa19.9■□□□□ 0.78
PCCB-219ENST00000494742 MRC1P22897 1456 aa19.9■□□□□ 0.78
PCCB-219ENST00000494742 APLP1P51693 650 aa19.89■□□□□ 0.77
PCCB-219ENST00000494742 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.77
PCCB-219ENST00000494742 SRP68Q9UHB9 627 aaKnown RBP19.89■□□□□ 0.77
PCCB-219ENST00000494742 TM4SF1P30408 202 aa19.88■□□□□ 0.77
PCCB-219ENST00000494742 DDR1Q08345 913 aa19.88■□□□□ 0.77
PCCB-219ENST00000494742 DALRD3Q5D0E6 543 aaKnown RBP19.88■□□□□ 0.77
PCCB-219ENST00000494742 ZPR1O75312 459 aa19.87■□□□□ 0.77
PCCB-219ENST00000494742 SOS1Q07889 1333 aaPredicted RBP19.86■□□□□ 0.77
PCCB-219ENST00000494742 POLRMTO00411 1230 aaKnown RBP19.86■□□□□ 0.77
PCCB-219ENST00000494742 DNAJC10Q8IXB1 793 aa19.86■□□□□ 0.77
PCCB-219ENST00000494742 RNMTO43148 476 aaKnown RBP19.85■□□□□ 0.77
PCCB-219ENST00000494742 CYP19A1P11511 503 aaPredicted RBP19.85■□□□□ 0.77
PCCB-219ENST00000494742 C9orf131Q5VYM1 1079 aa19.85■□□□□ 0.77
PCCB-219ENST00000494742 VSIG10Q8N0Z9 540 aa19.85■□□□□ 0.77
PCCB-219ENST00000494742 LGR6Q9HBX8 967 aa19.85■□□□□ 0.77
PCCB-219ENST00000494742 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
PCCB-219ENST00000494742 NMRK2Q9NPI5 230 aa19.84■□□□□ 0.77
PCCB-219ENST00000494742 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
PCCB-219ENST00000494742 KDM2BQ8NHM5 1336 aa19.83■□□□□ 0.77
PCCB-219ENST00000494742 NRXN2Q9P2S2 1712 aa19.83■□□□□ 0.77
PCCB-219ENST00000494742 USPL1Q5W0Q7 1092 aa19.83■□□□□ 0.77
PCCB-219ENST00000494742 RBM46Q8TBY0 533 aaKnown RBP19.83■□□□□ 0.77
PCCB-219ENST00000494742 NARFQ9UHQ1 456 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms