RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 C1orf115Q9H7X2 142 aa13.44□□□□□ -0.26
PRPF4B-209ENST00000494674 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
PRPF4B-209ENST00000494674 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
PRPF4B-209ENST00000494674 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
PRPF4B-209ENST00000494674 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
PRPF4B-209ENST00000494674 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
PRPF4B-209ENST00000494674 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
PRPF4B-209ENST00000494674 C5P01031 1676 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 SHANK3Q9BYB0 1731 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 PXDNLA1KZ92 1463 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 MRC1P22897 1456 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 KCNQ3O43525 872 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 HEG1Q9ULI3 1381 aa13.41□□□□□ -0.26
PRPF4B-209ENST00000494674 NUCB1Q02818 461 aa13.4□□□□□ -0.26
PRPF4B-209ENST00000494674 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.26
PRPF4B-209ENST00000494674 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
PRPF4B-209ENST00000494674 NLRP2Q9NX02 1062 aa13.4□□□□□ -0.26
PRPF4B-209ENST00000494674 HOXB7P09629 217 aa13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 FLIIQ13045 1269 aa13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 STK31Q9BXU1 1019 aa13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 COL5A2P05997 1499 aaPredicted RBP13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 F6X3S4 739 aa13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 TEFQ10587 303 aa13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
PRPF4B-209ENST00000494674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.271e-11■■■□□ 18.3
PRPF4B-209ENST00000494674 GLI3P10071 1580 aa13.38□□□□□ -0.27
PRPF4B-209ENST00000494674 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
PRPF4B-209ENST00000494674 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
PRPF4B-209ENST00000494674 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
PRPF4B-209ENST00000494674 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
PRPF4B-209ENST00000494674 MEIS3Q99687 375 aa13.38□□□□□ -0.27
PRPF4B-209ENST00000494674 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
PRPF4B-209ENST00000494674 BTBD11A6QL63 1104 aa13.37□□□□□ -0.27
PRPF4B-209ENST00000494674 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
PRPF4B-209ENST00000494674 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
PRPF4B-209ENST00000494674 PHKG2P15735 406 aa13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 TATP17735 454 aaPredicted RBP13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 WDR17Q8IZU2 1322 aa13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 ADRA2BP18089 450 aa13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
PRPF4B-209ENST00000494674 CYP27B1O15528 508 aa13.35□□□□□ -0.27
PRPF4B-209ENST00000494674 SEC24BO95487 1268 aa13.35□□□□□ -0.27
PRPF4B-209ENST00000494674 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
PRPF4B-209ENST00000494674 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
PRPF4B-209ENST00000494674 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
PRPF4B-209ENST00000494674 UBR2Q8IWV8 1755 aa13.34□□□□□ -0.27
PRPF4B-209ENST00000494674 LNPKQ9C0E8 428 aa13.34□□□□□ -0.27
PRPF4B-209ENST00000494674 DCTPP1Q9H773 170 aa13.34□□□□□ -0.27
PRPF4B-209ENST00000494674 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
PRPF4B-209ENST00000494674 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
PRPF4B-209ENST00000494674 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
PRPF4B-209ENST00000494674 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.27
PRPF4B-209ENST00000494674 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.27
PRPF4B-209ENST00000494674 RPAP2Q8IXW5 612 aaPredicted RBP13.33□□□□□ -0.27
PRPF4B-209ENST00000494674 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.27
PRPF4B-209ENST00000494674 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
PRPF4B-209ENST00000494674 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
PRPF4B-209ENST00000494674 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
PRPF4B-209ENST00000494674 NOP58Q9Y2X3 529 aaKnown RBP13.33□□□□□ -0.28
PRPF4B-209ENST00000494674 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
PRPF4B-209ENST00000494674 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
PRPF4B-209ENST00000494674 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
PRPF4B-209ENST00000494674 ADCY9O60503 1353 aa13.32□□□□□ -0.28
PRPF4B-209ENST00000494674 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
PRPF4B-209ENST00000494674 TUBGCP6Q96RT7 1819 aa13.31□□□□□ -0.28
PRPF4B-209ENST00000494674 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
PRPF4B-209ENST00000494674 ANKRD45Q5TZF3 282 aa13.31□□□□□ -0.28
PRPF4B-209ENST00000494674 DCAF5Q96JK2 942 aa13.3□□□□□ -0.28
PRPF4B-209ENST00000494674 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
PRPF4B-209ENST00000494674 ANXA1P04083 346 aa13.3□□□□□ -0.28
PRPF4B-209ENST00000494674 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
PRPF4B-209ENST00000494674 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
PRPF4B-209ENST00000494674 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
PRPF4B-209ENST00000494674 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
PRPF4B-209ENST00000494674 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
PRPF4B-209ENST00000494674 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
PRPF4B-209ENST00000494674 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
PRPF4B-209ENST00000494674 DBF4Q9UBU7 674 aaPredicted RBP13.29□□□□□ -0.28
PRPF4B-209ENST00000494674 GNAI2P04899 355 aa13.28□□□□□ -0.28
PRPF4B-209ENST00000494674 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
PRPF4B-209ENST00000494674 GNAI3P08754 354 aa13.27□□□□□ -0.28
PRPF4B-209ENST00000494674 PDIA6Q15084 440 aa13.27□□□□□ -0.28
PRPF4B-209ENST00000494674 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.28
PRPF4B-209ENST00000494674 BEND3Q5T5X7 828 aa13.27□□□□□ -0.28
PRPF4B-209ENST00000494674 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.28
PRPF4B-209ENST00000494674 ANP32EQ9BTT0 268 aa13.27□□□□□ -0.28
PRPF4B-209ENST00000494674 PI4KAP2A4QPH2 592 aa13.27□□□□□ -0.29
PRPF4B-209ENST00000494674 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.29
PRPF4B-209ENST00000494674 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
PRPF4B-209ENST00000494674 PI4KAP1Q8N8J0 262 aa13.27□□□□□ -0.29
PRPF4B-209ENST00000494674 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
PRPF4B-209ENST00000494674 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
PRPF4B-209ENST00000494674 PCDH11XQ9BZA7 1347 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms