RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 PHF14O94880 888 aa14.71□□□□□ -0.05
SCRN1-209ENST00000494620 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
SCRN1-209ENST00000494620 YY1P25490 414 aa14.71□□□□□ -0.05
SCRN1-209ENST00000494620 ZEB1P37275 1124 aaPredicted RBP14.71□□□□□ -0.05
SCRN1-209ENST00000494620 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
SCRN1-209ENST00000494620 SGIP1Q9BQI5 828 aa14.71□□□□□ -0.05
SCRN1-209ENST00000494620 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
SCRN1-209ENST00000494620 PKD1L3Q7Z443 1732 aa14.71□□□□□ -0.05
SCRN1-209ENST00000494620 SHANK3Q9BYB0 1731 aa14.71□□□□□ -0.05
SCRN1-209ENST00000494620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.7□□□□□ -0.06
SCRN1-209ENST00000494620 GNPATO15228 680 aa14.7□□□□□ -0.06
SCRN1-209ENST00000494620 PTCD1O75127 700 aaKnown RBP14.7□□□□□ -0.06
SCRN1-209ENST00000494620 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
SCRN1-209ENST00000494620 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
SCRN1-209ENST00000494620 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
SCRN1-209ENST00000494620 GNAT3A8MTJ3 354 aa14.69□□□□□ -0.06
SCRN1-209ENST00000494620 FCHSD2O94868 740 aa14.69□□□□□ -0.06
SCRN1-209ENST00000494620 TEFQ10587 303 aa14.69□□□□□ -0.06
SCRN1-209ENST00000494620 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
SCRN1-209ENST00000494620 PNNQ9H307 717 aaKnown RBP14.69□□□□□ -0.06
SCRN1-209ENST00000494620 LGR6Q9HBX8 967 aa14.69□□□□□ -0.06
SCRN1-209ENST00000494620 ITPK1Q13572 414 aa14.68□□□□□ -0.06
SCRN1-209ENST00000494620 TTC5Q8N0Z6 440 aa14.68□□□□□ -0.06
SCRN1-209ENST00000494620 RTF1Q92541 710 aaKnown RBP14.68□□□□□ -0.06
SCRN1-209ENST00000494620 ADRA2BP18089 450 aa14.67□□□□□ -0.06
SCRN1-209ENST00000494620 PRKAR2BP31323 418 aa14.67□□□□□ -0.06
SCRN1-209ENST00000494620 RFC4P35249 363 aa14.67□□□□□ -0.06
SCRN1-209ENST00000494620 RALBP1Q15311 655 aa14.67□□□□□ -0.06
SCRN1-209ENST00000494620 MSL1Q68DK7 614 aa14.67□□□□□ -0.06
SCRN1-209ENST00000494620 PAPPAQ13219 1627 aa14.66□□□□□ -0.06
SCRN1-209ENST00000494620 LY75O60449 1722 aa14.66□□□□□ -0.06
SCRN1-209ENST00000494620 CASZ1Q86V15 1759 aa14.66□□□□□ -0.06
SCRN1-209ENST00000494620 RPS6KA4O75676 772 aa14.66□□□□□ -0.06
SCRN1-209ENST00000494620 DDX10Q13206 875 aaKnown RBP14.66□□□□□ -0.06
SCRN1-209ENST00000494620 GPR162Q16538 588 aa14.66□□□□□ -0.06
SCRN1-209ENST00000494620 NLGN1Q8N2Q7 840 aa14.66□□□□□ -0.06
SCRN1-209ENST00000494620 KDM6AO15550 1401 aaPredicted RBP14.66□□□□□ -0.06
SCRN1-209ENST00000494620 CD2APQ9Y5K6 639 aa14.64□□□□□ -0.07
SCRN1-209ENST00000494620 CNTNAP4Q9C0A0 1308 aa14.64□□□□□ -0.07
SCRN1-209ENST00000494620 MAP3K5Q99683 1374 aa14.63□□□□□ -0.07
SCRN1-209ENST00000494620 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
SCRN1-209ENST00000494620 NPM2Q86SE8 214 aaKnown RBP14.63□□□□□ -0.07
SCRN1-209ENST00000494620 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
SCRN1-209ENST00000494620 SLC4A9Q96Q91 983 aa14.63□□□□□ -0.07
SCRN1-209ENST00000494620 TEX13AQ9BXU3 409 aaPredicted RBP14.63□□□□□ -0.07
SCRN1-209ENST00000494620 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
SCRN1-209ENST00000494620 ITGB4P16144 1822 aa14.63□□□□□ -0.07
SCRN1-209ENST00000494620 STARD3NLO95772 234 aa14.62□□□□□ -0.07
SCRN1-209ENST00000494620 CRKLP46109 303 aaKnown RBP14.62□□□□□ -0.07
SCRN1-209ENST00000494620 VSIG10Q8N0Z9 540 aa14.62□□□□□ -0.07
SCRN1-209ENST00000494620 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
SCRN1-209ENST00000494620 PHACTR3Q96KR7 559 aa14.62□□□□□ -0.07
SCRN1-209ENST00000494620 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
SCRN1-209ENST00000494620 IL17REQ8NFR9 667 aa14.61□□□□□ -0.07
SCRN1-209ENST00000494620 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
SCRN1-209ENST00000494620 BTBD11A6QL63 1104 aa14.6□□□□□ -0.07
SCRN1-209ENST00000494620 GRIN3BO60391 1043 aa14.6□□□□□ -0.07
SCRN1-209ENST00000494620 ZPR1O75312 459 aa14.6□□□□□ -0.07
SCRN1-209ENST00000494620 SMIM5Q71RC9 77 aa14.6□□□□□ -0.07
SCRN1-209ENST00000494620 DNAJC10Q8IXB1 793 aa14.6□□□□□ -0.07
SCRN1-209ENST00000494620 CCDC87Q9NVE4 849 aa14.6□□□□□ -0.07
SCRN1-209ENST00000494620 COL3A1P02461 1466 aaPredicted RBP14.59□□□□□ -0.07
SCRN1-209ENST00000494620 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
SCRN1-209ENST00000494620 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
SCRN1-209ENST00000494620 MAPK8IP3Q9UPT6 1336 aa14.59□□□□□ -0.07
SCRN1-209ENST00000494620 C4BP0C0L5 1744 aa14.58□□□□□ -0.07
SCRN1-209ENST00000494620 MMP10P09238 476 aa14.58□□□□□ -0.08
SCRN1-209ENST00000494620 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
SCRN1-209ENST00000494620 FMNL2Q96PY5 1086 aa14.58□□□□□ -0.08
SCRN1-209ENST00000494620 C5P01031 1676 aa14.58□□□□□ -0.08
SCRN1-209ENST00000494620 QSER1Q2KHR3 1735 aa14.58□□□□□ -0.08
SCRN1-209ENST00000494620 A0A087WZG4 1122 aa14.57□□□□□ -0.08
SCRN1-209ENST00000494620 CYP19A1P11511 503 aaPredicted RBP14.57□□□□□ -0.08
SCRN1-209ENST00000494620 INTS5Q6P9B9 1019 aaKnown RBP14.56□□□□□ -0.08
SCRN1-209ENST00000494620 PNISRQ8TF01 805 aaKnown RBP14.56□□□□□ -0.08
SCRN1-209ENST00000494620 GYS1P13807 737 aa14.55□□□□□ -0.08
SCRN1-209ENST00000494620 CANXP27824 592 aaKnown RBP14.55□□□□□ -0.08
SCRN1-209ENST00000494620 TAF7Q15545 349 aaPredicted RBP14.55□□□□□ -0.08
SCRN1-209ENST00000494620 NLGN2Q8NFZ4 835 aa14.55□□□□□ -0.08
SCRN1-209ENST00000494620 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
SCRN1-209ENST00000494620 MYBBP1AQ9BQG0 1328 aaKnown RBP14.55□□□□□ -0.08
SCRN1-209ENST00000494620 TGFB2P61812 414 aa14.54□□□□□ -0.08
SCRN1-209ENST00000494620 MCM10Q7L590 875 aa14.54□□□□□ -0.08
SCRN1-209ENST00000494620 TAF1LQ8IZX4 1826 aa14.53□□□□□ -0.08
SCRN1-209ENST00000494620 CEMIPQ8WUJ3 1361 aa14.53□□□□□ -0.08
SCRN1-209ENST00000494620 SNRPA1P09661 255 aaKnown RBP14.53□□□□□ -0.08
SCRN1-209ENST00000494620 WDR43Q15061 677 aaKnown RBP eCLIP14.53□□□□□ -0.08
SCRN1-209ENST00000494620 HEG1Q9ULI3 1381 aa14.52□□□□□ -0.08
SCRN1-209ENST00000494620 USP42Q9H9J4 1324 aaKnown RBP14.52□□□□□ -0.08
SCRN1-209ENST00000494620 NFE2L2Q16236 605 aa14.52□□□□□ -0.09
SCRN1-209ENST00000494620 SRP68Q9UHB9 627 aaKnown RBP14.52□□□□□ -0.09
SCRN1-209ENST00000494620 NARFQ9UHQ1 456 aa14.52□□□□□ -0.09
SCRN1-209ENST00000494620 ZBTB1Q9Y2K1 713 aa14.52□□□□□ -0.09
SCRN1-209ENST00000494620 ZNF330Q9Y3S2 320 aaPredicted RBP14.52□□□□□ -0.09
SCRN1-209ENST00000494620 CHD4Q14839 1912 aa14.51□□□□□ -0.09
SCRN1-209ENST00000494620 SOS1Q07889 1333 aaPredicted RBP14.51□□□□□ -0.09
SCRN1-209ENST00000494620 LMOD3Q0VAK6 560 aa14.51□□□□□ -0.09
SCRN1-209ENST00000494620 DCTN1Q14203 1278 aa14.51□□□□□ -0.09
SCRN1-209ENST00000494620 USPL1Q5W0Q7 1092 aa14.51□□□□□ -0.09
SCRN1-209ENST00000494620 MRC1P22897 1456 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms