RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 KCNQ3O43525 872 aa20.89■□□□□ 0.94
ATG4B-225ENST00000494465 CSB-PGBD3P0DP91 1061 aa20.89■□□□□ 0.94
ATG4B-225ENST00000494465 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
ATG4B-225ENST00000494465 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
ATG4B-225ENST00000494465 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
ATG4B-225ENST00000494465 TATP17735 454 aaPredicted RBP20.88■□□□□ 0.93
ATG4B-225ENST00000494465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATG4B-225ENST00000494465 SIRT2Q8IXJ6 389 aa20.87■□□□□ 0.93
ATG4B-225ENST00000494465 NECTIN2Q92692 538 aa20.87■□□□□ 0.93
ATG4B-225ENST00000494465 PRDM11Q9NQV5 511 aa20.87■□□□□ 0.93
ATG4B-225ENST00000494465 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
ATG4B-225ENST00000494465 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
ATG4B-225ENST00000494465 COL5A2P05997 1499 aaPredicted RBP20.86■□□□□ 0.93
ATG4B-225ENST00000494465 HOXB7P09629 217 aa20.86■□□□□ 0.93
ATG4B-225ENST00000494465 FLIIQ13045 1269 aa20.86■□□□□ 0.93
ATG4B-225ENST00000494465 MSH5O43196 834 aa20.85■□□□□ 0.93
ATG4B-225ENST00000494465 PHKG2P15735 406 aa20.85■□□□□ 0.93
ATG4B-225ENST00000494465 LTBP4Q8N2S1 1624 aa20.85■□□□□ 0.93
ATG4B-225ENST00000494465 F6X3S4 739 aa20.85■□□□□ 0.93
ATG4B-225ENST00000494465 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
ATG4B-225ENST00000494465 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
ATG4B-225ENST00000494465 HEG1Q9ULI3 1381 aa20.84■□□□□ 0.93
ATG4B-225ENST00000494465 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
ATG4B-225ENST00000494465 ROBO1Q9Y6N7 1651 aa20.84■□□□□ 0.93
ATG4B-225ENST00000494465 ATP10DQ9P241 1426 aa20.83■□□□□ 0.93
ATG4B-225ENST00000494465 PARP4Q9UKK3 1724 aaKnown RBP20.82■□□□□ 0.92
ATG4B-225ENST00000494465 CYP27B1O15528 508 aa20.81■□□□□ 0.92
ATG4B-225ENST00000494465 NUCB1Q02818 461 aa20.81■□□□□ 0.92
ATG4B-225ENST00000494465 MEIS3Q99687 375 aa20.81■□□□□ 0.92
ATG4B-225ENST00000494465 CCT4P50991 539 aaKnown RBP20.81■□□□□ 0.92
ATG4B-225ENST00000494465 MRC1P22897 1456 aa20.8■□□□□ 0.92
ATG4B-225ENST00000494465 FKBP5Q13451 457 aaPredicted RBP20.8■□□□□ 0.92
ATG4B-225ENST00000494465 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
ATG4B-225ENST00000494465 SLC4A10Q6U841 1118 aa20.8■□□□□ 0.92
ATG4B-225ENST00000494465 GCC1Q96CN9 775 aa20.79■□□□□ 0.92
ATG4B-225ENST00000494465 PHAXQ9H814 394 aaKnown RBP20.79■□□□□ 0.92
ATG4B-225ENST00000494465 AHDC1Q5TGY3 1603 aaPredicted RBP20.79■□□□□ 0.92
ATG4B-225ENST00000494465 GIGYF1O75420 1035 aaPredicted RBP20.79■□□□□ 0.92
ATG4B-225ENST00000494465 EIF2S2P20042 333 aaKnown RBP20.79■□□□□ 0.92
ATG4B-225ENST00000494465 SLC52A2Q9HAB3 445 aa20.79■□□□□ 0.92
ATG4B-225ENST00000494465 PXDNLA1KZ92 1463 aa20.78■□□□□ 0.92
ATG4B-225ENST00000494465 ANP32AP39687 249 aaKnown RBP20.78■□□□□ 0.92
ATG4B-225ENST00000494465 TOM1L2Q6ZVM7 507 aa20.78■□□□□ 0.92
ATG4B-225ENST00000494465 ANKRD44Q8N8A2 993 aa20.78■□□□□ 0.92
ATG4B-225ENST00000494465 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
ATG4B-225ENST00000494465 CEP85Q6P2H3 762 aa20.77■□□□□ 0.91
ATG4B-225ENST00000494465 CHD1LQ86WJ1 897 aa20.77■□□□□ 0.91
ATG4B-225ENST00000494465 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
ATG4B-225ENST00000494465 DCAF5Q96JK2 942 aa20.76■□□□□ 0.91
ATG4B-225ENST00000494465 CARD10Q9BWT7 1032 aa20.76■□□□□ 0.91
ATG4B-225ENST00000494465 C5P01031 1676 aa20.75■□□□□ 0.91
ATG4B-225ENST00000494465 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
ATG4B-225ENST00000494465 NFATC2IPQ8NCF5 419 aa20.75■□□□□ 0.91
ATG4B-225ENST00000494465 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
ATG4B-225ENST00000494465 COL22A1Q8NFW1 1626 aaPredicted RBP20.75■□□□□ 0.91
ATG4B-225ENST00000494465 PRAMEF22A3QJZ6 481 aa20.75■□□□□ 0.91
ATG4B-225ENST00000494465 RPAP2Q8IXW5 612 aaPredicted RBP20.75■□□□□ 0.91
ATG4B-225ENST00000494465 LNPKQ9C0E8 428 aa20.75■□□□□ 0.91
ATG4B-225ENST00000494465 ZNF790Q6PG37 636 aa20.74■□□□□ 0.91
ATG4B-225ENST00000494465 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
ATG4B-225ENST00000494465 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
ATG4B-225ENST00000494465 DCTPP1Q9H773 170 aa20.73■□□□□ 0.91
ATG4B-225ENST00000494465 IPO9Q96P70 1041 aaKnown RBP20.73■□□□□ 0.91
ATG4B-225ENST00000494465 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
ATG4B-225ENST00000494465 ANKRD45Q5TZF3 282 aa20.72■□□□□ 0.91
ATG4B-225ENST00000494465 ANXA1P04083 346 aa20.72■□□□□ 0.91
ATG4B-225ENST00000494465 STRN4Q9NRL3 753 aa20.72■□□□□ 0.91
ATG4B-225ENST00000494465 DBF4Q9UBU7 674 aaPredicted RBP20.72■□□□□ 0.91
ATG4B-225ENST00000494465 ZCRB1Q8TBF4 217 aaKnown RBP20.71■□□□□ 0.91
ATG4B-225ENST00000494465 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
ATG4B-225ENST00000494465 COL14A1Q05707 1796 aaKnown RBP20.7■□□□□ 0.9
ATG4B-225ENST00000494465 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
ATG4B-225ENST00000494465 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
ATG4B-225ENST00000494465 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
ATG4B-225ENST00000494465 SEC24BO95487 1268 aa20.7■□□□□ 0.9
ATG4B-225ENST00000494465 IL2RBP14784 551 aa20.7■□□□□ 0.9
ATG4B-225ENST00000494465 GLI3P10071 1580 aa20.7■□□□□ 0.9
ATG4B-225ENST00000494465 ADCY9O60503 1353 aa20.69■□□□□ 0.9
ATG4B-225ENST00000494465 EVA1CP58658 441 aa20.69■□□□□ 0.9
ATG4B-225ENST00000494465 GNAI2P04899 355 aa20.68■□□□□ 0.9
ATG4B-225ENST00000494465 USP44Q9H0E7 712 aa20.68■□□□□ 0.9
ATG4B-225ENST00000494465 PI4KAP2A4QPH2 592 aa20.67■□□□□ 0.9
ATG4B-225ENST00000494465 GNAI3P08754 354 aa20.67■□□□□ 0.9
ATG4B-225ENST00000494465 PDIA6Q15084 440 aa20.67■□□□□ 0.9
ATG4B-225ENST00000494465 PI4KAP1Q8N8J0 262 aa20.67■□□□□ 0.9
ATG4B-225ENST00000494465 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
ATG4B-225ENST00000494465 NKX1-1Q15270 411 aaPredicted RBP20.67■□□□□ 0.9
ATG4B-225ENST00000494465 BTG4Q9NY30 223 aa20.67■□□□□ 0.9
ATG4B-225ENST00000494465 DNAAF4Q8WXU2 420 aa20.66■□□□□ 0.9
ATG4B-225ENST00000494465 CABP4P57796 275 aa20.66■□□□□ 0.9
ATG4B-225ENST00000494465 BEND3Q5T5X7 828 aa20.66■□□□□ 0.9
ATG4B-225ENST00000494465 PHLPP1O60346 1717 aa20.65■□□□□ 0.9
ATG4B-225ENST00000494465 DDX21Q9NR30 783 aaKnown RBP eCLIP20.65■□□□□ 0.9
ATG4B-225ENST00000494465 UBR2Q8IWV8 1755 aa20.65■□□□□ 0.9
ATG4B-225ENST00000494465 SRCIN1Q9C0H9 1055 aa20.65■□□□□ 0.9
ATG4B-225ENST00000494465 PAPPAQ13219 1627 aa20.64■□□□□ 0.9
ATG4B-225ENST00000494465 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
ATG4B-225ENST00000494465 TOGARAM1Q9Y4F4 1720 aa20.63■□□□□ 0.89
ATG4B-225ENST00000494465 LAMB4A4D0S4 1761 aa20.63■□□□□ 0.89
ATG4B-225ENST00000494465 HMMRO75330 724 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms