RNA–Protein interactions for RNA: ENST00000494306.1

COX5B-204, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 2

Gene COX5B, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-204ENST00000494306 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
COX5B-204ENST00000494306 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
COX5B-204ENST00000494306 ADCY9O60503 1353 aa16.96■□□□□ 0.31
COX5B-204ENST00000494306 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
COX5B-204ENST00000494306 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
COX5B-204ENST00000494306 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
COX5B-204ENST00000494306 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
COX5B-204ENST00000494306 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
COX5B-204ENST00000494306 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
COX5B-204ENST00000494306 GNPATO15228 680 aa16.92■□□□□ 0.3
COX5B-204ENST00000494306 EIF4A2Q14240 407 aaKnown RBP16.92■□□□□ 0.3
COX5B-204ENST00000494306 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
COX5B-204ENST00000494306 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
COX5B-204ENST00000494306 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
COX5B-204ENST00000494306 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
COX5B-204ENST00000494306 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
COX5B-204ENST00000494306 MMP10P09238 476 aa16.89■□□□□ 0.29
COX5B-204ENST00000494306 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
COX5B-204ENST00000494306 KDRP35968 1356 aa16.89■□□□□ 0.29
COX5B-204ENST00000494306 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.29
COX5B-204ENST00000494306 ERVV-2B6SEH9 535 aa16.88■□□□□ 0.29
COX5B-204ENST00000494306 TRAPPC3LQ5T215 181 aa16.88■□□□□ 0.29
COX5B-204ENST00000494306 HSPA6P17066 643 aa16.87■□□□□ 0.29
COX5B-204ENST00000494306 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
COX5B-204ENST00000494306 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
COX5B-204ENST00000494306 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
COX5B-204ENST00000494306 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
COX5B-204ENST00000494306 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
COX5B-204ENST00000494306 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
COX5B-204ENST00000494306 PXDNLA1KZ92 1463 aa16.86■□□□□ 0.29
COX5B-204ENST00000494306 TGFB2P61812 414 aa16.85■□□□□ 0.29
COX5B-204ENST00000494306 IFFO2Q5TF58 517 aa16.85■□□□□ 0.29
COX5B-204ENST00000494306 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
COX5B-204ENST00000494306 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
COX5B-204ENST00000494306 KIF3CO14782 793 aa16.84■□□□□ 0.29
COX5B-204ENST00000494306 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
COX5B-204ENST00000494306 HSP90AB1P08238 724 aaKnown RBP16.84■□□□□ 0.29
COX5B-204ENST00000494306 GYS1P13807 737 aa16.84■□□□□ 0.29
COX5B-204ENST00000494306 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
COX5B-204ENST00000494306 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
COX5B-204ENST00000494306 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
COX5B-204ENST00000494306 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
COX5B-204ENST00000494306 KIF13BQ9NQT8 1826 aa16.83■□□□□ 0.28
COX5B-204ENST00000494306 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
COX5B-204ENST00000494306 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
COX5B-204ENST00000494306 AMOTQ4VCS5 1084 aa16.82■□□□□ 0.28
COX5B-204ENST00000494306 PANK3Q9H999 370 aa16.82■□□□□ 0.28
COX5B-204ENST00000494306 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
COX5B-204ENST00000494306 RFC4P35249 363 aa16.81■□□□□ 0.28
COX5B-204ENST00000494306 CABP4P57796 275 aa16.81■□□□□ 0.28
COX5B-204ENST00000494306 ZNF530Q6P9A1 599 aaPredicted RBP16.81■□□□□ 0.28
COX5B-204ENST00000494306 BCS1LQ9Y276 419 aa16.81■□□□□ 0.28
COX5B-204ENST00000494306 DPEP1P16444 411 aa16.8■□□□□ 0.28
COX5B-204ENST00000494306 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
COX5B-204ENST00000494306 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
COX5B-204ENST00000494306 COL5A3P25940 1745 aaPredicted RBP16.79■□□□□ 0.28
COX5B-204ENST00000494306 KCNA3P22001 575 aa16.79■□□□□ 0.28
COX5B-204ENST00000494306 MTHFSP49914 203 aa16.79■□□□□ 0.28
COX5B-204ENST00000494306 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
COX5B-204ENST00000494306 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
COX5B-204ENST00000494306 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
COX5B-204ENST00000494306 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
COX5B-204ENST00000494306 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
COX5B-204ENST00000494306 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
COX5B-204ENST00000494306 ARHGAP27Q6ZUM4 889 aa16.78■□□□□ 0.28
COX5B-204ENST00000494306 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
COX5B-204ENST00000494306 C4AP0C0L4 1744 aa16.78■□□□□ 0.28
COX5B-204ENST00000494306 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
COX5B-204ENST00000494306 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
COX5B-204ENST00000494306 C1orf141Q5JVX7 400 aa16.77■□□□□ 0.28
COX5B-204ENST00000494306 MORC1Q86VD1 984 aa16.77■□□□□ 0.28
COX5B-204ENST00000494306 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
COX5B-204ENST00000494306 FCHSD2O94868 740 aa16.76■□□□□ 0.27
COX5B-204ENST00000494306 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
COX5B-204ENST00000494306 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
COX5B-204ENST00000494306 IL13P35225 146 aa16.75■□□□□ 0.27
COX5B-204ENST00000494306 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
COX5B-204ENST00000494306 TOMM70O94826 608 aa16.74■□□□□ 0.27
COX5B-204ENST00000494306 FKBP8Q14318 412 aa16.74■□□□□ 0.27
COX5B-204ENST00000494306 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
COX5B-204ENST00000494306 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
COX5B-204ENST00000494306 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
COX5B-204ENST00000494306 APLP1P51693 650 aa16.73■□□□□ 0.27
COX5B-204ENST00000494306 DDR1Q08345 913 aa16.73■□□□□ 0.27
COX5B-204ENST00000494306 NMRK2Q9NPI5 230 aa16.73■□□□□ 0.27
COX5B-204ENST00000494306 PIM2Q9P1W9 311 aa16.73■□□□□ 0.27
COX5B-204ENST00000494306 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
COX5B-204ENST00000494306 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
COX5B-204ENST00000494306 DNAJC5GQ8N7S2 189 aa16.72■□□□□ 0.27
COX5B-204ENST00000494306 BRCA1P38398 1863 aaKnown RBP16.71■□□□□ 0.27
COX5B-204ENST00000494306 TM4SF1P30408 202 aa16.71■□□□□ 0.27
COX5B-204ENST00000494306 TJP1Q07157 1748 aa16.7■□□□□ 0.26
COX5B-204ENST00000494306 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
COX5B-204ENST00000494306 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
COX5B-204ENST00000494306 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
COX5B-204ENST00000494306 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
COX5B-204ENST00000494306 CHRNA5P30532 468 aa16.69■□□□□ 0.26
COX5B-204ENST00000494306 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
COX5B-204ENST00000494306 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
COX5B-204ENST00000494306 KNSTRNQ9Y448 316 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms