RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
CPSF7-213ENST00000494016 RPIAP49247 311 aa8.34□□□□□ -1.07
CPSF7-213ENST00000494016 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
CPSF7-213ENST00000494016 LIAT1Q6ZQX7 453 aa8.34□□□□□ -1.07
CPSF7-213ENST00000494016 BANK1Q8NDB2 785 aa8.34□□□□□ -1.07
CPSF7-213ENST00000494016 KIDINS220Q9ULH0 1771 aa8.33□□□□□ -1.08
CPSF7-213ENST00000494016 POLR1AO95602 1720 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-213ENST00000494016 SLC19A1P41440 591 aa8.33□□□□□ -1.08
CPSF7-213ENST00000494016 PTCRAQ6ISU1 281 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-213ENST00000494016 DCAF11Q8TEB1 546 aa8.33□□□□□ -1.08
CPSF7-213ENST00000494016 LRRN4Q8WUT4 740 aa8.33□□□□□ -1.08
CPSF7-213ENST00000494016 ATP10AO60312 1499 aa8.32□□□□□ -1.08
CPSF7-213ENST00000494016 KIF7Q2M1P5 1343 aa8.32□□□□□ -1.08
CPSF7-213ENST00000494016 ARID4BQ4LE39 1312 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-213ENST00000494016 REREQ9P2R6 1566 aa8.31□□□□□ -1.08
CPSF7-213ENST00000494016 INO80Q9ULG1 1556 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-213ENST00000494016 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
CPSF7-213ENST00000494016 ZBTB24O43167 697 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-213ENST00000494016 CTHP32929 405 aa8.31□□□□□ -1.08
CPSF7-213ENST00000494016 HSPA2P54652 639 aa8.31□□□□□ -1.08
CPSF7-213ENST00000494016 ZNF326Q5BKZ1 582 aaKnown RBP8.31□□□□□ -1.08
CPSF7-213ENST00000494016 MAP10Q9P2G4 905 aa8.31□□□□□ -1.08
CPSF7-213ENST00000494016 RALGAPBQ86X10 1494 aa8.31□□□□□ -1.08
CPSF7-213ENST00000494016 RGL3Q3MIN7 710 aa8.3□□□□□ -1.08
CPSF7-213ENST00000494016 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
CPSF7-213ENST00000494016 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
CPSF7-213ENST00000494016 DHX29Q7Z478 1369 aaKnown RBP8.3□□□□□ -1.08
CPSF7-213ENST00000494016 USP47Q96K76 1375 aa8.3□□□□□ -1.08
CPSF7-213ENST00000494016 CCDC144AA2RUR9 1427 aa8.29□□□□□ -1.08
CPSF7-213ENST00000494016 ATP7AQ04656 1500 aa8.29□□□□□ -1.08
CPSF7-213ENST00000494016 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
CPSF7-213ENST00000494016 SPRYD7Q5W111 196 aa8.29□□□□□ -1.08
CPSF7-213ENST00000494016 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-213ENST00000494016 MLH3Q9UHC1 1453 aa8.29□□□□□ -1.08
CPSF7-213ENST00000494016 E9PCH4 1651 aa8.29□□□□□ -1.08
CPSF7-213ENST00000494016 VWDEQ8N2E2 1590 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 A2MP01023 1474 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
CPSF7-213ENST00000494016 TRIM32Q13049 653 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 NBPF1Q3BBV0 1214 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 CCDC184Q52MB2 194 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 CARD11Q9BXL7 1154 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 SNRKQ9NRH2 765 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 TRPM1Q7Z4N2 1603 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 PTPRTO14522 1441 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 PRAG1Q86YV5 1406 aa8.28□□□□□ -1.08
CPSF7-213ENST00000494016 C3P01024 1663 aa8.27□□□□□ -1.08
CPSF7-213ENST00000494016 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
CPSF7-213ENST00000494016 MLECQ14165 292 aa8.27□□□□□ -1.09
CPSF7-213ENST00000494016 NR6A1Q15406 480 aa8.27□□□□□ -1.09
CPSF7-213ENST00000494016 MTMR14Q8NCE2 650 aa8.27□□□□□ -1.09
CPSF7-213ENST00000494016 PRKRIP1Q9H875 184 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-213ENST00000494016 PREX1Q8TCU6 1659 aa8.27□□□□□ -1.09
CPSF7-213ENST00000494016 AGLP35573 1532 aa8.26□□□□□ -1.09
CPSF7-213ENST00000494016 KIF3BO15066 747 aa8.26□□□□□ -1.09
CPSF7-213ENST00000494016 ZNF598Q86UK7 904 aaKnown RBP8.26□□□□□ -1.09
CPSF7-213ENST00000494016 ARMC2Q8NEN0 867 aa8.26□□□□□ -1.09
CPSF7-213ENST00000494016 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
CPSF7-213ENST00000494016 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-213ENST00000494016 TRIM34Q9BYJ4 488 aa8.26□□□□□ -1.09
CPSF7-213ENST00000494016 EIF2AK4Q9P2K8 1649 aaKnown RBP8.25□□□□□ -1.09
CPSF7-213ENST00000494016 GPRASP1Q5JY77 1395 aa8.25□□□□□ -1.09
CPSF7-213ENST00000494016 TET3O43151 1660 aa8.25□□□□□ -1.09
CPSF7-213ENST00000494016 MROH1Q8NDA8 1641 aa8.25□□□□□ -1.09
CPSF7-213ENST00000494016 SPHKAPQ2M3C7 1700 aa8.24□□□□□ -1.09
CPSF7-213ENST00000494016 WNT7BP56706 349 aa8.24□□□□□ -1.09
CPSF7-213ENST00000494016 MCM6Q14566 821 aa8.24□□□□□ -1.09
CPSF7-213ENST00000494016 ZNF697Q5TEC3 545 aa8.24□□□□□ -1.09
CPSF7-213ENST00000494016 BAP1Q92560 729 aa8.24□□□□□ -1.09
CPSF7-213ENST00000494016 TRPM2O94759 1503 aa8.24□□□□□ -1.09
CPSF7-213ENST00000494016 ROCK2O75116 1388 aaKnown RBP8.23□□□□□ -1.09
CPSF7-213ENST00000494016 LAMC1P11047 1609 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 CLTCL1P53675 1640 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 SKOR1P84550 965 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 PKDCCQ504Y2 493 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.09
CPSF7-213ENST00000494016 FKBPLQ9UIM3 349 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 MROH2AA6NES4 1674 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 CLTCQ00610 1675 aaKnown RBP8.23□□□□□ -1.09
CPSF7-213ENST00000494016 CEP152O94986 1710 aa8.23□□□□□ -1.09
CPSF7-213ENST00000494016 KANK1Q14678 1352 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 APBB1O00213 710 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 SH3BP2P78314 561 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 FLIIQ13045 1269 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 TESK2Q96S53 571 aa8.22□□□□□ -1.09
CPSF7-213ENST00000494016 PRDM15P57071 1507 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-213ENST00000494016 ZC3H4Q9UPT8 1303 aaKnown RBP8.22□□□□□ -1.09
CPSF7-213ENST00000494016 LMTK2Q8IWU2 1503 aa8.21□□□□□ -1.1
CPSF7-213ENST00000494016 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
CPSF7-213ENST00000494016 POLR3GLQ9BT43 218 aa8.21□□□□□ -1.1
CPSF7-213ENST00000494016 RNF17Q9BXT8 1623 aaKnown RBP8.21□□□□□ -1.1
CPSF7-213ENST00000494016 STRCQ7RTU9 1775 aa8.2□□□□□ -1.1
CPSF7-213ENST00000494016 POTECB2RU33 542 aa8.2□□□□□ -1.1
CPSF7-213ENST00000494016 WNT7AO00755 349 aa8.2□□□□□ -1.1
CPSF7-213ENST00000494016 CEBPAP49715 358 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-213ENST00000494016 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
CPSF7-213ENST00000494016 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms