RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 AIDAQ96BJ3 306 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 STRN4Q9NRL3 753 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 NSD3Q9BZ95 1437 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 CCDC83Q8IWF9 413 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 IL1RAPL2Q9NP60 686 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 SHTN1A0MZ66 631 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 CCDC141Q6ZP82 1450 aa23.48■■□□□ 1.35
RNF40-203ENST00000493683 MYL6BP14649 208 aa23.47■■□□□ 1.35
RNF40-203ENST00000493683 FKBP15Q5T1M5 1219 aa23.47■■□□□ 1.35
RNF40-203ENST00000493683 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
RNF40-203ENST00000493683 TOM1L2Q6ZVM7 507 aa23.47■■□□□ 1.35
RNF40-203ENST00000493683 FGFR1OPO95684 399 aaKnown RBP23.46■■□□□ 1.35
RNF40-203ENST00000493683 CGNQ9P2M7 1197 aaKnown RBP23.46■■□□□ 1.35
RNF40-203ENST00000493683 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
RNF40-203ENST00000493683 IGHMBP2P38935 993 aaKnown RBP23.46■■□□□ 1.35
RNF40-203ENST00000493683 PLCD4Q9BRC7 762 aa23.46■■□□□ 1.35
RNF40-203ENST00000493683 RAI14Q9P0K7 980 aa23.46■■□□□ 1.35
RNF40-203ENST00000493683 POTEB2H3BUK9 544 aa23.46■■□□□ 1.35
RNF40-203ENST00000493683 SSBP05455 408 aaKnown RBP eCLIP23.45■■□□□ 1.34
RNF40-203ENST00000493683 FAM193AP78312 1265 aa23.45■■□□□ 1.34
RNF40-203ENST00000493683 SLC26A8Q96RN1 970 aa23.45■■□□□ 1.34
RNF40-203ENST00000493683 DDX19AQ9NUU7 478 aaKnown RBP23.45■■□□□ 1.34
RNF40-203ENST00000493683 SEPT11Q9NVA2 429 aaKnown RBP23.45■■□□□ 1.34
RNF40-203ENST00000493683 LRP2BPQ9P2M1 347 aa23.45■■□□□ 1.34
RNF40-203ENST00000493683 GSDMDP57764 484 aa23.45■■□□□ 1.34
RNF40-203ENST00000493683 VPS36Q86VN1 386 aa23.45■■□□□ 1.34
RNF40-203ENST00000493683 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
RNF40-203ENST00000493683 CAVIN2O95810 425 aa23.44■■□□□ 1.34
RNF40-203ENST00000493683 LARP1Q6PKG0 1096 aaKnown RBP23.44■■□□□ 1.34
RNF40-203ENST00000493683 TSG101Q99816 390 aa23.44■■□□□ 1.34
RNF40-203ENST00000493683 FAM107BQ9H098 131 aa23.44■■□□□ 1.34
RNF40-203ENST00000493683 PHF23Q9BUL5 403 aaPredicted RBP23.44■■□□□ 1.34
RNF40-203ENST00000493683 CASQ1P31415 396 aa23.43■■□□□ 1.34
RNF40-203ENST00000493683 KIF20AO95235 890 aa23.43■■□□□ 1.34
RNF40-203ENST00000493683 RARSP54136 660 aaKnown RBP23.43■■□□□ 1.34
RNF40-203ENST00000493683 DNAI2Q9GZS0 605 aa23.43■■□□□ 1.34
RNF40-203ENST00000493683 CCDC91Q7Z6B0 441 aa23.43■■□□□ 1.34
RNF40-203ENST00000493683 MPNDQ8N594 471 aa23.43■■□□□ 1.34
RNF40-203ENST00000493683 SF3B2Q13435 895 aaKnown RBP23.43■■□□□ 1.34
RNF40-203ENST00000493683 TOP1P11387 765 aaKnown RBP23.42■■□□□ 1.34
RNF40-203ENST00000493683 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
RNF40-203ENST00000493683 TRIM21P19474 475 aaKnown RBP23.42■■□□□ 1.34
RNF40-203ENST00000493683 ZNF76P36508 570 aa23.42■■□□□ 1.34
RNF40-203ENST00000493683 DUSP27Q5VZP5 1158 aa23.42■■□□□ 1.34
RNF40-203ENST00000493683 ANKLE2Q86XL3 938 aa23.42■■□□□ 1.34
RNF40-203ENST00000493683 LIMCH1Q9UPQ0 1083 aa23.42■■□□□ 1.34
RNF40-203ENST00000493683 GOLGA6L9A6NEM1 432 aa23.41■■□□□ 1.34
RNF40-203ENST00000493683 NUTM1Q86Y26 1132 aa23.41■■□□□ 1.34
RNF40-203ENST00000493683 DDX11Q96FC9 970 aa23.41■■□□□ 1.34
RNF40-203ENST00000493683 RAB34Q9BZG1 259 aa23.41■■□□□ 1.34
RNF40-203ENST00000493683 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
RNF40-203ENST00000493683 EXOC6BQ9Y2D4 811 aa23.41■■□□□ 1.34
RNF40-203ENST00000493683 IDH1O75874 414 aaKnown RBP23.4■■□□□ 1.34
RNF40-203ENST00000493683 C8orf76Q96K31 380 aa23.4■■□□□ 1.34
RNF40-203ENST00000493683 STARD3NLO95772 234 aa23.4■■□□□ 1.34
RNF40-203ENST00000493683 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
RNF40-203ENST00000493683 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
RNF40-203ENST00000493683 SEC63Q9UGP8 760 aaKnown RBP23.4■■□□□ 1.34
RNF40-203ENST00000493683 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
RNF40-203ENST00000493683 CLIP2Q9UDT6 1046 aa23.39■■□□□ 1.34
RNF40-203ENST00000493683 USO1O60763 962 aaKnown RBP23.39■■□□□ 1.34
RNF40-203ENST00000493683 UVSSAQ2YD98 709 aa23.39■■□□□ 1.33
RNF40-203ENST00000493683 PYM1Q9BRP8 204 aaKnown RBP23.39■■□□□ 1.33
RNF40-203ENST00000493683 LRPPRCP42704 1394 aaKnown RBP23.39■■□□□ 1.33
RNF40-203ENST00000493683 TNIP1Q15025 636 aa23.39■■□□□ 1.33
RNF40-203ENST00000493683 CAMK4Q16566 473 aa23.39■■□□□ 1.33
RNF40-203ENST00000493683 PRDM11Q9NQV5 511 aa23.39■■□□□ 1.33
RNF40-203ENST00000493683 MICALCLQ6ZW33 695 aa23.38■■□□□ 1.33
RNF40-203ENST00000493683 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
RNF40-203ENST00000493683 PTPRCP08575 1304 aa23.38■■□□□ 1.33
RNF40-203ENST00000493683 KIF4BQ2VIQ3 1234 aa23.38■■□□□ 1.33
RNF40-203ENST00000493683 STK11IPQ8N1F8 1099 aa23.37■■□□□ 1.33
RNF40-203ENST00000493683 RNF41Q9H4P4 317 aaPredicted RBP23.37■■□□□ 1.33
RNF40-203ENST00000493683 PAFAH1B1P43034 410 aa23.37■■□□□ 1.33
RNF40-203ENST00000493683 AMOTQ4VCS5 1084 aa23.37■■□□□ 1.33
RNF40-203ENST00000493683 METTL24Q5JXM2 366 aa23.37■■□□□ 1.33
RNF40-203ENST00000493683 RRS1Q15050 365 aaKnown RBP23.37■■□□□ 1.33
RNF40-203ENST00000493683 CALCOCO1Q9P1Z2 691 aa23.37■■□□□ 1.33
RNF40-203ENST00000493683 YEATS4O95619 227 aa23.36■■□□□ 1.33
RNF40-203ENST00000493683 IFIT1P09914 478 aaKnown RBP23.36■■□□□ 1.33
RNF40-203ENST00000493683 FERMT3Q86UX7 667 aa23.36■■□□□ 1.33
RNF40-203ENST00000493683 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
RNF40-203ENST00000493683 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
RNF40-203ENST00000493683 URI1O94763 535 aaPredicted RBP23.35■■□□□ 1.33
RNF40-203ENST00000493683 CACNA2D4Q7Z3S7 1137 aa23.35■■□□□ 1.33
RNF40-203ENST00000493683 CTCFLQ8NI51 663 aaPredicted RBP23.35■■□□□ 1.33
RNF40-203ENST00000493683 MAP2K1Q02750 393 aaPredicted RBP23.35■■□□□ 1.33
RNF40-203ENST00000493683 TAF7Q15545 349 aaPredicted RBP23.35■■□□□ 1.33
RNF40-203ENST00000493683 ZNF652Q9Y2D9 606 aa23.35■■□□□ 1.33
RNF40-203ENST00000493683 NSD2O96028 1365 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 GCOM1H8Y6P7 765 aaPredicted RBP23.34■■□□□ 1.33
RNF40-203ENST00000493683 MYZAPP0CAP1 466 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 STX1AQ16623 288 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
RNF40-203ENST00000493683 TMEM266Q2M3C6 531 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 CCDC184Q52MB2 194 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 DYDC1Q8WWB3 177 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 NAPBQ9H115 298 aa23.34■■□□□ 1.33
RNF40-203ENST00000493683 LUZP1Q86V48 1076 aa23.33■■□□□ 1.33
RNF40-203ENST00000493683 NAA15Q9BXJ9 866 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms