RNA–Protein interactions for RNA: ENST00000493672.1

SNRNP25-207, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-207ENST00000493672 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 COL24A1Q17RW2 1714 aa16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 ZNF831Q5JPB2 1677 aa16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 MSH5O43196 834 aa16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
SNRNP25-207ENST00000493672 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
SNRNP25-207ENST00000493672 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
SNRNP25-207ENST00000493672 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
SNRNP25-207ENST00000493672 SSFA2P28290 1259 aa16.25■□□□□ 0.19
SNRNP25-207ENST00000493672 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
SNRNP25-207ENST00000493672 GAS2L2Q8NHY3 880 aa16.25■□□□□ 0.19
SNRNP25-207ENST00000493672 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
SNRNP25-207ENST00000493672 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
SNRNP25-207ENST00000493672 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
SNRNP25-207ENST00000493672 ITPK1Q13572 414 aa16.24■□□□□ 0.19
SNRNP25-207ENST00000493672 SYT17Q9BSW7 474 aa16.24■□□□□ 0.19
SNRNP25-207ENST00000493672 FHDC1Q9C0D6 1143 aaPredicted RBP16.24■□□□□ 0.19
SNRNP25-207ENST00000493672 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
SNRNP25-207ENST00000493672 MRC1P22897 1456 aa16.23■□□□□ 0.19
SNRNP25-207ENST00000493672 ADAMTS7Q9UKP4 1686 aa16.23■□□□□ 0.19
SNRNP25-207ENST00000493672 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
SNRNP25-207ENST00000493672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.22■□□□□ 0.19
SNRNP25-207ENST00000493672 GNPATO15228 680 aa16.22■□□□□ 0.19
SNRNP25-207ENST00000493672 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
SNRNP25-207ENST00000493672 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
SNRNP25-207ENST00000493672 VIRMAQ69YN4 1812 aaKnown RBP16.22■□□□□ 0.19
SNRNP25-207ENST00000493672 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
SNRNP25-207ENST00000493672 PHF14O94880 888 aa16.21■□□□□ 0.19
SNRNP25-207ENST00000493672 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
SNRNP25-207ENST00000493672 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNRNP25-207ENST00000493672 GNAT3A8MTJ3 354 aa16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 FCHSD2O94868 740 aa16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
SNRNP25-207ENST00000493672 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
SNRNP25-207ENST00000493672 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
SNRNP25-207ENST00000493672 ADRA2BP18089 450 aa16.19■□□□□ 0.18
SNRNP25-207ENST00000493672 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
SNRNP25-207ENST00000493672 RALBP1Q15311 655 aa16.18■□□□□ 0.18
SNRNP25-207ENST00000493672 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
SNRNP25-207ENST00000493672 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
SNRNP25-207ENST00000493672 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
SNRNP25-207ENST00000493672 TEFQ10587 303 aa16.17■□□□□ 0.18
SNRNP25-207ENST00000493672 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
SNRNP25-207ENST00000493672 AMIGO3Q86WK7 504 aa16.17■□□□□ 0.18
SNRNP25-207ENST00000493672 NEFMP07197 916 aa16.16■□□□□ 0.18
SNRNP25-207ENST00000493672 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
SNRNP25-207ENST00000493672 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
SNRNP25-207ENST00000493672 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
SNRNP25-207ENST00000493672 TJP1Q07157 1748 aa16.16■□□□□ 0.18
SNRNP25-207ENST00000493672 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
SNRNP25-207ENST00000493672 TTC5Q8N0Z6 440 aa16.15■□□□□ 0.18
SNRNP25-207ENST00000493672 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
SNRNP25-207ENST00000493672 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
SNRNP25-207ENST00000493672 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
SNRNP25-207ENST00000493672 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
SNRNP25-207ENST00000493672 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 RFC4P35249 363 aa16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 UBR2Q8IWV8 1755 aa16.13■□□□□ 0.17
SNRNP25-207ENST00000493672 DNAJC10Q8IXB1 793 aa16.12■□□□□ 0.17
SNRNP25-207ENST00000493672 CCDC87Q9NVE4 849 aa16.12■□□□□ 0.17
SNRNP25-207ENST00000493672 SIPA1L3O60292 1781 aaPredicted RBP16.12■□□□□ 0.17
SNRNP25-207ENST00000493672 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
SNRNP25-207ENST00000493672 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
SNRNP25-207ENST00000493672 GPR162Q16538 588 aa16.1■□□□□ 0.17
SNRNP25-207ENST00000493672 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
SNRNP25-207ENST00000493672 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
SNRNP25-207ENST00000493672 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
SNRNP25-207ENST00000493672 STARD3NLO95772 234 aa16.09■□□□□ 0.17
SNRNP25-207ENST00000493672 YY1P25490 414 aa16.09■□□□□ 0.17
SNRNP25-207ENST00000493672 NLGN2Q8NFZ4 835 aa16.09■□□□□ 0.17
SNRNP25-207ENST00000493672 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
SNRNP25-207ENST00000493672 BTBD11A6QL63 1104 aa16.08■□□□□ 0.16
SNRNP25-207ENST00000493672 MMP10P09238 476 aa16.08■□□□□ 0.16
SNRNP25-207ENST00000493672 GYS1P13807 737 aa16.08■□□□□ 0.16
SNRNP25-207ENST00000493672 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
SNRNP25-207ENST00000493672 ZNF496Q96IT1 587 aaPredicted RBP16.07■□□□□ 0.16
SNRNP25-207ENST00000493672 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
SNRNP25-207ENST00000493672 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
SNRNP25-207ENST00000493672 USP42Q9H9J4 1324 aaKnown RBP16.07■□□□□ 0.16
SNRNP25-207ENST00000493672 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
SNRNP25-207ENST00000493672 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
SNRNP25-207ENST00000493672 ZPR1O75312 459 aa16.06■□□□□ 0.16
SNRNP25-207ENST00000493672 MCM10Q7L590 875 aa16.06■□□□□ 0.16
SNRNP25-207ENST00000493672 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
SNRNP25-207ENST00000493672 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
SNRNP25-207ENST00000493672 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
SNRNP25-207ENST00000493672 COL15A1P39059 1388 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms