RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 PCDH11XQ9BZA7 1347 aa24.33■■□□□ 1.49
NECTIN3-211ENST00000493615 PCDH11YQ9BZA8 1340 aa24.33■■□□□ 1.49
NECTIN3-211ENST00000493615 TWISTNBQ3B726 338 aaPredicted RBP24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 DDX54Q8TDD1 881 aaKnown RBP24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 SSH1Q8WYL5 1049 aa24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 ADAMTS7Q9UKP4 1686 aa24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 BARGINQ6ZT62 677 aa24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 DCAF5Q96JK2 942 aa24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 BABAM1Q9NWV8 329 aa24.32■■□□□ 1.48
NECTIN3-211ENST00000493615 C20orf194Q5TEA3 1177 aa24.3■■□□□ 1.48
NECTIN3-211ENST00000493615 KCNQ3O43525 872 aa24.29■■□□□ 1.48
NECTIN3-211ENST00000493615 ONECUT3O60422 494 aaPredicted RBP24.29■■□□□ 1.48
NECTIN3-211ENST00000493615 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
NECTIN3-211ENST00000493615 BTBD11A6QL63 1104 aa24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 HSP90AB1P08238 724 aaKnown RBP24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 SLC52A2Q9HAB3 445 aa24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 SMC4Q9NTJ3 1288 aa24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 WNK3Q9BYP7 1800 aa24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 NKX1-1Q15270 411 aaPredicted RBP24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 SHANK3Q9BYB0 1731 aa24.28■■□□□ 1.48
NECTIN3-211ENST00000493615 VIRMAQ69YN4 1812 aaKnown RBP24.27■■□□□ 1.48
NECTIN3-211ENST00000493615 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
NECTIN3-211ENST00000493615 FRAT1Q92837 279 aaPredicted RBP24.26■■□□□ 1.47
NECTIN3-211ENST00000493615 ZNF428Q96B54 188 aa24.26■■□□□ 1.47
NECTIN3-211ENST00000493615 SCN11AQ9UI33 1791 aa24.26■■□□□ 1.47
NECTIN3-211ENST00000493615 ALDH1L2Q3SY69 923 aa24.26■■□□□ 1.47
NECTIN3-211ENST00000493615 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.26■■□□□ 1.47
NECTIN3-211ENST00000493615 EXOC5O00471 708 aa24.24■■□□□ 1.47
NECTIN3-211ENST00000493615 EIF4A1P60842 406 aaKnown RBP24.24■■□□□ 1.47
NECTIN3-211ENST00000493615 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
NECTIN3-211ENST00000493615 THSD7AQ9UPZ6 1657 aa24.24■■□□□ 1.47
NECTIN3-211ENST00000493615 DDB1Q16531 1140 aa24.24■■□□□ 1.47
NECTIN3-211ENST00000493615 RGS12O14924 1447 aa24.23■■□□□ 1.47
NECTIN3-211ENST00000493615 TNNQ9UQP3 1299 aa24.23■■□□□ 1.47
NECTIN3-211ENST00000493615 BRWD3Q6RI45 1802 aa24.22■■□□□ 1.47
NECTIN3-211ENST00000493615 SIPA1L3O60292 1781 aaPredicted RBP24.22■■□□□ 1.47
NECTIN3-211ENST00000493615 MRC1P22897 1456 aa24.22■■□□□ 1.47
NECTIN3-211ENST00000493615 CABP4P57796 275 aa24.21■■□□□ 1.47
NECTIN3-211ENST00000493615 SLC39A6Q13433 755 aa24.21■■□□□ 1.47
NECTIN3-211ENST00000493615 MRPL50Q8N5N7 158 aaKnown RBP24.21■■□□□ 1.47
NECTIN3-211ENST00000493615 EXOC6Q8TAG9 804 aa24.21■■□□□ 1.47
NECTIN3-211ENST00000493615 KDM3BQ7LBC6 1761 aa24.21■■□□□ 1.47
NECTIN3-211ENST00000493615 CANXP27824 592 aaKnown RBP24.2■■□□□ 1.46
NECTIN3-211ENST00000493615 NOB1Q9ULX3 412 aaKnown RBP24.2■■□□□ 1.46
NECTIN3-211ENST00000493615 TNS2Q63HR2 1409 aa24.2■■□□□ 1.46
NECTIN3-211ENST00000493615 ERVV-2B6SEH9 535 aa24.19■■□□□ 1.46
NECTIN3-211ENST00000493615 BRPF1P55201 1214 aaPredicted RBP24.19■■□□□ 1.46
NECTIN3-211ENST00000493615 ERICH6BQ5W0A0 696 aa24.19■■□□□ 1.46
NECTIN3-211ENST00000493615 CRBNQ96SW2 442 aa24.19■■□□□ 1.46
NECTIN3-211ENST00000493615 FAM182BQ5T319 152 aa24.19■■□□□ 1.46
NECTIN3-211ENST00000493615 ZNF790Q6PG37 636 aa24.19■■□□□ 1.46
NECTIN3-211ENST00000493615 PANK1Q8TE04 598 aa24.17■■□□□ 1.46
NECTIN3-211ENST00000493615 RLBP1P12271 317 aa24.17■■□□□ 1.46
NECTIN3-211ENST00000493615 ZKSCAN2Q63HK3 967 aa24.17■■□□□ 1.46
NECTIN3-211ENST00000493615 PDE3AQ14432 1141 aa24.16■■□□□ 1.46
NECTIN3-211ENST00000493615 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
NECTIN3-211ENST00000493615 HEG1Q9ULI3 1381 aa24.16■■□□□ 1.46
NECTIN3-211ENST00000493615 NECTIN2Q92692 538 aa24.15■■□□□ 1.46
NECTIN3-211ENST00000493615 CLUAP1Q96AJ1 413 aa24.15■■□□□ 1.46
NECTIN3-211ENST00000493615 KIF16BQ96L93 1317 aa24.15■■□□□ 1.46
NECTIN3-211ENST00000493615 TRIM27P14373 513 aa24.15■■□□□ 1.46
NECTIN3-211ENST00000493615 MARCH10Q8NA82 808 aaPredicted RBP24.15■■□□□ 1.46
NECTIN3-211ENST00000493615 SOS1Q07889 1333 aaPredicted RBP24.14■■□□□ 1.45
NECTIN3-211ENST00000493615 TOGARAM1Q9Y4F4 1720 aa24.14■■□□□ 1.45
NECTIN3-211ENST00000493615 PRAMEF22A3QJZ6 481 aa24.13■■□□□ 1.45
NECTIN3-211ENST00000493615 GIGYF1O75420 1035 aaPredicted RBP24.13■■□□□ 1.45
NECTIN3-211ENST00000493615 ATF7IPQ6VMQ6 1270 aa24.13■■□□□ 1.45
NECTIN3-211ENST00000493615 ZNF496Q96IT1 587 aaPredicted RBP24.13■■□□□ 1.45
NECTIN3-211ENST00000493615 SLC4A2P04920 1241 aa24.12■■□□□ 1.45
NECTIN3-211ENST00000493615 ILDR2Q71H61 639 aa24.12■■□□□ 1.45
NECTIN3-211ENST00000493615 HOXB7P09629 217 aa24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 PPP4R2Q9NY27 417 aa24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 EP400Q96L91 3159 aa24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 IPO8O15397 1037 aaKnown RBP24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 HDGFL1Q5TGJ6 251 aa24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 CCDC30Q5VVM6 783 aa24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 COG6Q9Y2V7 657 aa24.11■■□□□ 1.45
NECTIN3-211ENST00000493615 PIGBQ92521 554 aa24.1■■□□□ 1.45
NECTIN3-211ENST00000493615 TMOD3Q9NYL9 352 aa24.1■■□□□ 1.45
NECTIN3-211ENST00000493615 G2E3Q7L622 706 aa24.09■■□□□ 1.45
NECTIN3-211ENST00000493615 DZIP1LQ8IYY4 767 aaKnown RBP24.09■■□□□ 1.45
NECTIN3-211ENST00000493615 TTC5Q8N0Z6 440 aa24.09■■□□□ 1.45
NECTIN3-211ENST00000493615 ARHGAP45Q92619 1136 aa24.09■■□□□ 1.45
NECTIN3-211ENST00000493615 KAT6BQ8WYB5 2073 aa24.08■■□□□ 1.45
NECTIN3-211ENST00000493615 FTSJ3Q8IY81 847 aaKnown RBP24.07■■□□□ 1.44
NECTIN3-211ENST00000493615 STK31Q9BXU1 1019 aa24.07■■□□□ 1.44
NECTIN3-211ENST00000493615 PRIM1P49642 420 aaKnown RBP24.07■■□□□ 1.44
NECTIN3-211ENST00000493615 FMNL2Q96PY5 1086 aa24.06■■□□□ 1.44
NECTIN3-211ENST00000493615 B4GALNT3Q6L9W6 998 aa24.05■■□□□ 1.44
NECTIN3-211ENST00000493615 ASAP1Q9ULH1 1129 aa24.05■■□□□ 1.44
NECTIN3-211ENST00000493615 BCL9O00512 1426 aa24.04■■□□□ 1.44
NECTIN3-211ENST00000493615 SYTL4Q96C24 671 aaPredicted RBP24.04■■□□□ 1.44
NECTIN3-211ENST00000493615 CHPF2Q9P2E5 772 aa24.04■■□□□ 1.44
NECTIN3-211ENST00000493615 MS4A1P11836 297 aa24.04■■□□□ 1.44
NECTIN3-211ENST00000493615 TMEM57Q8N5G2 664 aa24.04■■□□□ 1.44
NECTIN3-211ENST00000493615 ACSBG1Q96GR2 724 aa24.04■■□□□ 1.44
NECTIN3-211ENST00000493615 PTCD1O75127 700 aaKnown RBP24.03■■□□□ 1.44
NECTIN3-211ENST00000493615 SNRPA1P09661 255 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms