RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
SNED1-212ENST00000493358 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
SNED1-212ENST00000493358 SSFA2P28290 1259 aa18.16■□□□□ 0.5
SNED1-212ENST00000493358 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
SNED1-212ENST00000493358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
SNED1-212ENST00000493358 MTHFSP49914 203 aa18.15■□□□□ 0.5
SNED1-212ENST00000493358 CABP4P57796 275 aa18.15■□□□□ 0.5
SNED1-212ENST00000493358 KDRP35968 1356 aa18.15■□□□□ 0.5
SNED1-212ENST00000493358 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
SNED1-212ENST00000493358 GNPATO15228 680 aa18.14■□□□□ 0.49
SNED1-212ENST00000493358 CC2D1BQ5T0F9 858 aaKnown RBP18.14■□□□□ 0.49
SNED1-212ENST00000493358 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
SNED1-212ENST00000493358 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
SNED1-212ENST00000493358 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
SNED1-212ENST00000493358 UTRNP46939 3433 aa18.13■□□□□ 0.49
SNED1-212ENST00000493358 IL13P35225 146 aa18.13■□□□□ 0.49
SNED1-212ENST00000493358 MYH14Q7Z406 1995 aaKnown RBP18.13■□□□□ 0.49
SNED1-212ENST00000493358 C4AP0C0L4 1744 aa18.12■□□□□ 0.49
SNED1-212ENST00000493358 ITPK1Q13572 414 aa18.11■□□□□ 0.49
SNED1-212ENST00000493358 NLGN2Q8NFZ4 835 aa18.11■□□□□ 0.49
SNED1-212ENST00000493358 CICQ96RK0 1608 aaPredicted RBP18.1■□□□□ 0.49
SNED1-212ENST00000493358 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
SNED1-212ENST00000493358 CD2APQ9Y5K6 639 aa18.1■□□□□ 0.49
SNED1-212ENST00000493358 TJP1Q07157 1748 aa18.09■□□□□ 0.49
SNED1-212ENST00000493358 NPC1L1Q9UHC9 1359 aa18.09■□□□□ 0.49
SNED1-212ENST00000493358 DIAPH1O60610 1272 aaKnown RBP18.09■□□□□ 0.49
SNED1-212ENST00000493358 KIF13BQ9NQT8 1826 aa18.08■□□□□ 0.48
SNED1-212ENST00000493358 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
SNED1-212ENST00000493358 GRIN3BO60391 1043 aa18.08■□□□□ 0.48
SNED1-212ENST00000493358 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
SNED1-212ENST00000493358 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.48
SNED1-212ENST00000493358 HMOX1P09601 288 aa18.07■□□□□ 0.48
SNED1-212ENST00000493358 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
SNED1-212ENST00000493358 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
SNED1-212ENST00000493358 GOLGB1Q14789 3259 aaKnown RBP18.07■□□□□ 0.48
SNED1-212ENST00000493358 CNTNAP4Q9C0A0 1308 aa18.06■□□□□ 0.48
SNED1-212ENST00000493358 ADRA2BP18089 450 aa18.06■□□□□ 0.48
SNED1-212ENST00000493358 ZNF784Q8NCA9 323 aaPredicted RBP18.06■□□□□ 0.48
SNED1-212ENST00000493358 NFATC2IPQ8NCF5 419 aa18.06■□□□□ 0.48
SNED1-212ENST00000493358 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
SNED1-212ENST00000493358 RC3H1Q5TC82 1133 aaKnown RBP18.05■□□□□ 0.48
SNED1-212ENST00000493358 SMIM5Q71RC9 77 aa18.05■□□□□ 0.48
SNED1-212ENST00000493358 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
SNED1-212ENST00000493358 ADAMTS7Q9UKP4 1686 aa18.04■□□□□ 0.48
SNED1-212ENST00000493358 MRC1P22897 1456 aa18.04■□□□□ 0.48
SNED1-212ENST00000493358 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
SNED1-212ENST00000493358 RFC4P35249 363 aa18.03■□□□□ 0.48
SNED1-212ENST00000493358 UBR2Q8IWV8 1755 aa18.03■□□□□ 0.48
SNED1-212ENST00000493358 COL3A1P02461 1466 aaPredicted RBP18.02■□□□□ 0.48
SNED1-212ENST00000493358 YBX3P16989 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNED1-212ENST00000493358 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
SNED1-212ENST00000493358 CFAP53Q96M91 514 aa18.02■□□□□ 0.48
SNED1-212ENST00000493358 SLC4A9Q96Q91 983 aa18.02■□□□□ 0.48
SNED1-212ENST00000493358 SLC52A2Q9HAB3 445 aa18.02■□□□□ 0.48
SNED1-212ENST00000493358 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
SNED1-212ENST00000493358 MMP10P09238 476 aa18.01■□□□□ 0.47
SNED1-212ENST00000493358 SIPA1L3O60292 1781 aaPredicted RBP18.01■□□□□ 0.47
SNED1-212ENST00000493358 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
SNED1-212ENST00000493358 RNMTO43148 476 aaKnown RBP17.99■□□□□ 0.47
SNED1-212ENST00000493358 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
SNED1-212ENST00000493358 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
SNED1-212ENST00000493358 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
SNED1-212ENST00000493358 MTHFSDQ2M296 383 aaKnown RBP17.98■□□□□ 0.47
SNED1-212ENST00000493358 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
SNED1-212ENST00000493358 PARP3Q9Y6F1 533 aa17.98■□□□□ 0.47
SNED1-212ENST00000493358 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
SNED1-212ENST00000493358 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
SNED1-212ENST00000493358 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
SNED1-212ENST00000493358 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SNED1-212ENST00000493358 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
SNED1-212ENST00000493358 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
SNED1-212ENST00000493358 GYS1P13807 737 aa17.95■□□□□ 0.46
SNED1-212ENST00000493358 TEFQ10587 303 aa17.95■□□□□ 0.46
SNED1-212ENST00000493358 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
SNED1-212ENST00000493358 C10orf71Q711Q0 1435 aa17.95■□□□□ 0.46
SNED1-212ENST00000493358 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
SNED1-212ENST00000493358 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
SNED1-212ENST00000493358 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
SNED1-212ENST00000493358 SLC39A6Q13433 755 aa17.94■□□□□ 0.46
SNED1-212ENST00000493358 DNAJC10Q8IXB1 793 aa17.94■□□□□ 0.46
SNED1-212ENST00000493358 ZPR1O75312 459 aa17.93■□□□□ 0.46
SNED1-212ENST00000493358 TGFB2P61812 414 aa17.93■□□□□ 0.46
SNED1-212ENST00000493358 PXDNLA1KZ92 1463 aa17.93■□□□□ 0.46
SNED1-212ENST00000493358 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
SNED1-212ENST00000493358 VSIG10Q8N0Z9 540 aa17.92■□□□□ 0.46
SNED1-212ENST00000493358 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
SNED1-212ENST00000493358 SRP68Q9UHB9 627 aaKnown RBP17.91■□□□□ 0.46
SNED1-212ENST00000493358 COL15A1P39059 1388 aa17.91■□□□□ 0.46
SNED1-212ENST00000493358 ATP10DQ9P241 1426 aa17.9■□□□□ 0.46
SNED1-212ENST00000493358 PRKAR2BP31323 418 aa17.9■□□□□ 0.46
SNED1-212ENST00000493358 INTS5Q6P9B9 1019 aaKnown RBP17.9■□□□□ 0.46
SNED1-212ENST00000493358 SOS1Q07889 1333 aaPredicted RBP17.9■□□□□ 0.46
SNED1-212ENST00000493358 STARD3NLO95772 234 aa17.89■□□□□ 0.45
SNED1-212ENST00000493358 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
SNED1-212ENST00000493358 CYP19A1P11511 503 aaPredicted RBP17.89■□□□□ 0.45
SNED1-212ENST00000493358 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
SNED1-212ENST00000493358 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNED1-212ENST00000493358 SCN7AQ01118 1682 aa17.88■□□□□ 0.45
SNED1-212ENST00000493358 C1QTNF8P60827 252 aa17.88■□□□□ 0.45
SNED1-212ENST00000493358 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms