RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
TM4SF1-203ENST00000493298 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
TM4SF1-203ENST00000493298 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
TM4SF1-203ENST00000493298 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
TM4SF1-203ENST00000493298 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
TM4SF1-203ENST00000493298 SPON1Q9HCB6 807 aa12.07□□□□□ -0.48
TM4SF1-203ENST00000493298 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
TM4SF1-203ENST00000493298 KIAA1551Q9HCM1 1747 aa12.06□□□□□ -0.48
TM4SF1-203ENST00000493298 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
TM4SF1-203ENST00000493298 HMOX1P09601 288 aa12.06□□□□□ -0.48
TM4SF1-203ENST00000493298 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
TM4SF1-203ENST00000493298 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
TM4SF1-203ENST00000493298 KIF13BQ9NQT8 1826 aa12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 APAF1O14727 1248 aa12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.482e-13■□□□□ 10.4
TM4SF1-203ENST00000493298 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 CFAP53Q96M91 514 aa12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 ASAP1Q9ULH1 1129 aa12.05□□□□□ -0.48
TM4SF1-203ENST00000493298 CHD4Q14839 1912 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 U2SURPO15042 1029 aaKnown RBP12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 HNRNPUQ00839 825 aaKnown RBP eCLIP12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 ITPK1Q13572 414 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 SULT6B1Q6IMI4 303 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 MTFR1LQ9H019 292 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
TM4SF1-203ENST00000493298 FCHSD2O94868 740 aa12.03□□□□□ -0.48
TM4SF1-203ENST00000493298 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
TM4SF1-203ENST00000493298 COL23A1Q86Y22 540 aaPredicted RBP12.03□□□□□ -0.48
TM4SF1-203ENST00000493298 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
TM4SF1-203ENST00000493298 RUNDC1Q96C34 613 aa12.03□□□□□ -0.48
TM4SF1-203ENST00000493298 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
TM4SF1-203ENST00000493298 ERVV-2B6SEH9 535 aa12.02□□□□□ -0.49
TM4SF1-203ENST00000493298 WDR43Q15061 677 aaKnown RBP eCLIP12.02□□□□□ -0.49
TM4SF1-203ENST00000493298 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.49
TM4SF1-203ENST00000493298 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
TM4SF1-203ENST00000493298 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
TM4SF1-203ENST00000493298 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
TM4SF1-203ENST00000493298 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
TM4SF1-203ENST00000493298 SIK1P57059 783 aa12.01□□□□□ -0.49
TM4SF1-203ENST00000493298 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
TM4SF1-203ENST00000493298 ZNF530Q6P9A1 599 aaPredicted RBP12.01□□□□□ -0.49
TM4SF1-203ENST00000493298 SMIM5Q71RC9 77 aa12.01□□□□□ -0.49
TM4SF1-203ENST00000493298 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
TM4SF1-203ENST00000493298 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
TM4SF1-203ENST00000493298 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
TM4SF1-203ENST00000493298 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
TM4SF1-203ENST00000493298 LGR6Q9HBX8 967 aa12□□□□□ -0.49
TM4SF1-203ENST00000493298 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
TM4SF1-203ENST00000493298 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
TM4SF1-203ENST00000493298 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
TM4SF1-203ENST00000493298 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
TM4SF1-203ENST00000493298 SMARCC1Q92922 1105 aaPredicted RBP11.99□□□□□ -0.49
TM4SF1-203ENST00000493298 NUDCQ9Y266 331 aa11.99□□□□□ -0.49
TM4SF1-203ENST00000493298 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
TM4SF1-203ENST00000493298 SYT17Q9BSW7 474 aa11.98□□□□□ -0.49
TM4SF1-203ENST00000493298 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
TM4SF1-203ENST00000493298 TFCP2L1Q9NZI6 479 aa11.98□□□□□ -0.49
TM4SF1-203ENST00000493298 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
TM4SF1-203ENST00000493298 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
TM4SF1-203ENST00000493298 AKAP4Q5JQC9 854 aa11.97□□□□□ -0.49
TM4SF1-203ENST00000493298 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
TM4SF1-203ENST00000493298 AFDNP55196 1824 aaKnown RBP11.96□□□□□ -0.49
TM4SF1-203ENST00000493298 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.49
TM4SF1-203ENST00000493298 HSP90AB1P08238 724 aaKnown RBP11.96□□□□□ -0.49
TM4SF1-203ENST00000493298 NFE2L2Q16236 605 aa11.96□□□□□ -0.49
TM4SF1-203ENST00000493298 CCDC27Q2M243 656 aa11.96□□□□□ -0.49
TM4SF1-203ENST00000493298 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
TM4SF1-203ENST00000493298 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
TM4SF1-203ENST00000493298 ARXQ96QS3 562 aa11.95□□□□□ -0.5
TM4SF1-203ENST00000493298 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
TM4SF1-203ENST00000493298 SLC52A2Q9HAB3 445 aa11.95□□□□□ -0.5
TM4SF1-203ENST00000493298 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
TM4SF1-203ENST00000493298 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
TM4SF1-203ENST00000493298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
TM4SF1-203ENST00000493298 SLFN5Q08AF3 891 aa11.94□□□□□ -0.5
TM4SF1-203ENST00000493298 DCTN1Q14203 1278 aa11.94□□□□□ -0.5
TM4SF1-203ENST00000493298 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
TM4SF1-203ENST00000493298 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
TM4SF1-203ENST00000493298 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
TM4SF1-203ENST00000493298 SSFA2P28290 1259 aa11.93□□□□□ -0.5
TM4SF1-203ENST00000493298 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
TM4SF1-203ENST00000493298 RIPK4P57078 832 aa11.93□□□□□ -0.5
TM4SF1-203ENST00000493298 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
TM4SF1-203ENST00000493298 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
TM4SF1-203ENST00000493298 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
TM4SF1-203ENST00000493298 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
TM4SF1-203ENST00000493298 CABP4P57796 275 aa11.92□□□□□ -0.5
TM4SF1-203ENST00000493298 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
TM4SF1-203ENST00000493298 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
TM4SF1-203ENST00000493298 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
TM4SF1-203ENST00000493298 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
TM4SF1-203ENST00000493298 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
TM4SF1-203ENST00000493298 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
TM4SF1-203ENST00000493298 LAMB4A4D0S4 1761 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms