RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 NPC1L1Q9UHC9 1359 aa27.86■■■□□ 2.05
CLTA-208ENST00000493185 KDM6AO15550 1401 aaPredicted RBP27.86■■■□□ 2.05
CLTA-208ENST00000493185 CABP4P57796 275 aa27.86■■■□□ 2.05
CLTA-208ENST00000493185 MSL1Q68DK7 614 aa27.86■■■□□ 2.05
CLTA-208ENST00000493185 LINC00116Q8NCU8 138 aa27.86■■■□□ 2.05
CLTA-208ENST00000493185 PHF14O94880 888 aa27.84■■■□□ 2.05
CLTA-208ENST00000493185 ITPK1Q13572 414 aa27.83■■■□□ 2.05
CLTA-208ENST00000493185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.82■■■□□ 2.04
CLTA-208ENST00000493185 DIAPH1O60610 1272 aaKnown RBP27.82■■■□□ 2.04
CLTA-208ENST00000493185 SSFA2P28290 1259 aa27.82■■■□□ 2.04
CLTA-208ENST00000493185 CNGB1Q14028 1251 aaPredicted RBP27.82■■■□□ 2.04
CLTA-208ENST00000493185 AMIGO3Q86WK7 504 aa27.81■■■□□ 2.04
CLTA-208ENST00000493185 RBM42Q9BTD8 480 aaKnown RBP27.81■■■□□ 2.04
CLTA-208ENST00000493185 ZNF831Q5JPB2 1677 aa27.81■■■□□ 2.04
CLTA-208ENST00000493185 GNPATO15228 680 aa27.8■■■□□ 2.04
CLTA-208ENST00000493185 HMOX1P09601 288 aa27.8■■■□□ 2.04
CLTA-208ENST00000493185 SCN11AQ9UI33 1791 aa27.79■■■□□ 2.04
CLTA-208ENST00000493185 GPR162Q16538 588 aa27.78■■■□□ 2.04
CLTA-208ENST00000493185 AKAP4Q5JQC9 854 aa27.78■■■□□ 2.04
CLTA-208ENST00000493185 CHD4Q14839 1912 aa27.78■■■□□ 2.04
CLTA-208ENST00000493185 SMIM5Q71RC9 77 aa27.77■■■□□ 2.04
CLTA-208ENST00000493185 NFATC2IPQ8NCF5 419 aa27.76■■■□□ 2.03
CLTA-208ENST00000493185 NLGN2Q8NFZ4 835 aa27.76■■■□□ 2.03
CLTA-208ENST00000493185 SLC4A9Q96Q91 983 aa27.75■■■□□ 2.03
CLTA-208ENST00000493185 UTRNP46939 3433 aa27.74■■■□□ 2.03
CLTA-208ENST00000493185 COL5A3P25940 1745 aaPredicted RBP27.74■■■□□ 2.03
CLTA-208ENST00000493185 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
CLTA-208ENST00000493185 RTCBQ9Y3I0 505 aaKnown RBP27.73■■■□□ 2.03
CLTA-208ENST00000493185 COL3A1P02461 1466 aaPredicted RBP27.72■■■□□ 2.03
CLTA-208ENST00000493185 RC3H1Q5TC82 1133 aaKnown RBP27.72■■■□□ 2.03
CLTA-208ENST00000493185 VIRMAQ69YN4 1812 aaKnown RBP27.71■■■□□ 2.03
CLTA-208ENST00000493185 PTCD1O75127 700 aaKnown RBP27.71■■■□□ 2.03
CLTA-208ENST00000493185 CD2APQ9Y5K6 639 aa27.71■■■□□ 2.03
CLTA-208ENST00000493185 CNTNAP4Q9C0A0 1308 aa27.7■■■□□ 2.03
CLTA-208ENST00000493185 U2SURPO15042 1029 aaKnown RBP27.7■■■□□ 2.02
CLTA-208ENST00000493185 TRAPPC3LQ5T215 181 aa27.7■■■□□ 2.02
CLTA-208ENST00000493185 ADRA2BP18089 450 aa27.68■■■□□ 2.02
CLTA-208ENST00000493185 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
CLTA-208ENST00000493185 SLC52A2Q9HAB3 445 aa27.68■■■□□ 2.02
CLTA-208ENST00000493185 LGR6Q9HBX8 967 aa27.68■■■□□ 2.02
CLTA-208ENST00000493185 RNMTO43148 476 aaKnown RBP27.67■■■□□ 2.02
CLTA-208ENST00000493185 CFAP53Q96M91 514 aa27.67■■■□□ 2.02
CLTA-208ENST00000493185 MRC1P22897 1456 aa27.67■■■□□ 2.02
CLTA-208ENST00000493185 MYH14Q7Z406 1995 aaKnown RBP27.66■■■□□ 2.02
CLTA-208ENST00000493185 RPS6KA4O75676 772 aa27.65■■■□□ 2.02
CLTA-208ENST00000493185 CICQ96RK0 1608 aaPredicted RBP27.64■■■□□ 2.02
CLTA-208ENST00000493185 GOLGB1Q14789 3259 aaKnown RBP27.64■■■□□ 2.02
CLTA-208ENST00000493185 ADAMTS7Q9UKP4 1686 aa27.64■■■□□ 2.02
CLTA-208ENST00000493185 TJP1Q07157 1748 aa27.64■■■□□ 2.01
CLTA-208ENST00000493185 GRIN3BO60391 1043 aa27.62■■■□□ 2.01
CLTA-208ENST00000493185 RFC4P35249 363 aa27.62■■■□□ 2.01
CLTA-208ENST00000493185 CRKLP46109 303 aaKnown RBP27.62■■■□□ 2.01
CLTA-208ENST00000493185 ARHGEF1Q92888 912 aaKnown RBP27.62■■■□□ 2.01
CLTA-208ENST00000493185 NLGN1Q8N2Q7 840 aa27.61■■■□□ 2.01
CLTA-208ENST00000493185 GAS2L2Q8NHY3 880 aa27.61■■■□□ 2.01
CLTA-208ENST00000493185 MMP10P09238 476 aa27.6■■■□□ 2.01
CLTA-208ENST00000493185 YBX3P16989 372 aaKnown RBP eCLIP27.6■■■□□ 2.01
CLTA-208ENST00000493185 ZNF784Q8NCA9 323 aaPredicted RBP27.6■■■□□ 2.01
CLTA-208ENST00000493185 C4AP0C0L4 1744 aa27.6■■■□□ 2.01
CLTA-208ENST00000493185 NUDCQ9Y266 331 aa27.59■■■□□ 2.01
CLTA-208ENST00000493185 PPP2R1AP30153 589 aa27.58■■■□□ 2.01
CLTA-208ENST00000493185 SLC39A6Q13433 755 aa27.58■■■□□ 2.01
CLTA-208ENST00000493185 GNAT3A8MTJ3 354 aa27.56■■■□□ 2
CLTA-208ENST00000493185 GYS1P13807 737 aa27.56■■■□□ 2
CLTA-208ENST00000493185 DNAJC10Q8IXB1 793 aa27.56■■■□□ 2
CLTA-208ENST00000493185 KCPQ6ZWJ8 1503 aa27.55■■■□□ 2
CLTA-208ENST00000493185 PRKAR2BP31323 418 aa27.54■■■□□ 2
CLTA-208ENST00000493185 CCDC87Q9NVE4 849 aa27.54■■■□□ 2
CLTA-208ENST00000493185 TEFQ10587 303 aa27.53■■■□□ 2
CLTA-208ENST00000493185 INTS5Q6P9B9 1019 aaKnown RBP27.53■■■□□ 2
CLTA-208ENST00000493185 RSPH6AQ9H0K4 717 aa27.53■■■□□ 2
CLTA-208ENST00000493185 TTC5Q8N0Z6 440 aa27.52■■■□□ 2
CLTA-208ENST00000493185 KIF13BQ9NQT8 1826 aa27.52■■■□□ 2
CLTA-208ENST00000493185 UBR2Q8IWV8 1755 aa27.52■■■□□ 2
CLTA-208ENST00000493185 U2AF1L5P0DN76 240 aaPredicted RBP27.51■■□□□ 1.99
CLTA-208ENST00000493185 U2AF1Q01081 240 aaKnown RBP eCLIP27.51■■□□□ 1.99
CLTA-208ENST00000493185 VSIG10Q8N0Z9 540 aa27.51■■□□□ 1.99
CLTA-208ENST00000493185 PARP3Q9Y6F1 533 aa27.51■■□□□ 1.99
CLTA-208ENST00000493185 USP42Q9H9J4 1324 aaKnown RBP27.5■■□□□ 1.99
CLTA-208ENST00000493185 CYP19A1P11511 503 aaPredicted RBP27.5■■□□□ 1.99
CLTA-208ENST00000493185 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
CLTA-208ENST00000493185 PHACTR3Q96KR7 559 aa27.49■■□□□ 1.99
CLTA-208ENST00000493185 SRP68Q9UHB9 627 aaKnown RBP27.49■■□□□ 1.99
CLTA-208ENST00000493185 SIPA1L3O60292 1781 aaPredicted RBP27.48■■□□□ 1.99
CLTA-208ENST00000493185 SOS1Q07889 1333 aaPredicted RBP27.47■■□□□ 1.99
CLTA-208ENST00000493185 WWC3Q9ULE0 1092 aa27.47■■□□□ 1.99
CLTA-208ENST00000493185 C10orf71Q711Q0 1435 aa27.47■■□□□ 1.99
CLTA-208ENST00000493185 ZPR1O75312 459 aa27.46■■□□□ 1.99
CLTA-208ENST00000493185 FCHSD2O94868 740 aa27.46■■□□□ 1.99
CLTA-208ENST00000493185 TGFB2P61812 414 aa27.46■■□□□ 1.99
CLTA-208ENST00000493185 FKBP8Q14318 412 aa27.45■■□□□ 1.98
CLTA-208ENST00000493185 ZNF790Q6PG37 636 aa27.45■■□□□ 1.98
CLTA-208ENST00000493185 CEMIPQ8WUJ3 1361 aa27.45■■□□□ 1.98
CLTA-208ENST00000493185 PXDNLA1KZ92 1463 aa27.44■■□□□ 1.98
CLTA-208ENST00000493185 STARD3NLO95772 234 aa27.44■■□□□ 1.98
CLTA-208ENST00000493185 ZBTB1Q9Y2K1 713 aa27.44■■□□□ 1.98
CLTA-208ENST00000493185 N4BP2Q86UW6 1770 aaPredicted RBP27.44■■□□□ 1.98
CLTA-208ENST00000493185 KIAA1551Q9HCM1 1747 aa27.43■■□□□ 1.98
CLTA-208ENST00000493185 COL15A1P39059 1388 aa27.43■■□□□ 1.98
CLTA-208ENST00000493185 RTF1Q92541 710 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms