RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 MTHFSP49914 203 aa26.71■■□□□ 1.87
RFC2-210ENST00000493156 ITPK1Q13572 414 aa26.71■■□□□ 1.87
RFC2-210ENST00000493156 COL5A3P25940 1745 aaPredicted RBP26.7■■□□□ 1.87
RFC2-210ENST00000493156 SCN11AQ9UI33 1791 aa26.69■■□□□ 1.86
RFC2-210ENST00000493156 SSFA2P28290 1259 aa26.69■■□□□ 1.86
RFC2-210ENST00000493156 MSL1Q68DK7 614 aa26.69■■□□□ 1.86
RFC2-210ENST00000493156 ATP6V1AP38606 617 aa26.68■■□□□ 1.86
RFC2-210ENST00000493156 CC2D1BQ5T0F9 858 aaKnown RBP26.68■■□□□ 1.86
RFC2-210ENST00000493156 KLHL34Q8N239 644 aa26.68■■□□□ 1.86
RFC2-210ENST00000493156 CHD4Q14839 1912 aa26.68■■□□□ 1.86
RFC2-210ENST00000493156 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.67■■□□□ 1.86
RFC2-210ENST00000493156 C1orf141Q5JVX7 400 aa26.67■■□□□ 1.86
RFC2-210ENST00000493156 CICQ96RK0 1608 aaPredicted RBP26.67■■□□□ 1.86
RFC2-210ENST00000493156 COL3A1P02461 1466 aaPredicted RBP26.67■■□□□ 1.86
RFC2-210ENST00000493156 NLGN2Q8NFZ4 835 aa26.66■■□□□ 1.86
RFC2-210ENST00000493156 SLC4A9Q96Q91 983 aa26.66■■□□□ 1.86
RFC2-210ENST00000493156 PHF14O94880 888 aa26.64■■□□□ 1.86
RFC2-210ENST00000493156 CABP4P57796 275 aa26.64■■□□□ 1.86
RFC2-210ENST00000493156 GNPATO15228 680 aa26.63■■□□□ 1.85
RFC2-210ENST00000493156 SMIM5Q71RC9 77 aa26.63■■□□□ 1.85
RFC2-210ENST00000493156 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
RFC2-210ENST00000493156 MRC1P22897 1456 aa26.62■■□□□ 1.85
RFC2-210ENST00000493156 VIRMAQ69YN4 1812 aaKnown RBP26.61■■□□□ 1.85
RFC2-210ENST00000493156 DIAPH1O60610 1272 aaKnown RBP26.61■■□□□ 1.85
RFC2-210ENST00000493156 AKAP4Q5JQC9 854 aa26.61■■□□□ 1.85
RFC2-210ENST00000493156 GPR162Q16538 588 aa26.6■■□□□ 1.85
RFC2-210ENST00000493156 CD2APQ9Y5K6 639 aa26.6■■□□□ 1.85
RFC2-210ENST00000493156 CNTNAP4Q9C0A0 1308 aa26.6■■□□□ 1.85
RFC2-210ENST00000493156 UTRNP46939 3433 aa26.59■■□□□ 1.85
RFC2-210ENST00000493156 TJP1Q07157 1748 aa26.59■■□□□ 1.85
RFC2-210ENST00000493156 RC3H1Q5TC82 1133 aaKnown RBP26.59■■□□□ 1.85
RFC2-210ENST00000493156 RBM42Q9BTD8 480 aaKnown RBP26.59■■□□□ 1.85
RFC2-210ENST00000493156 HMOX1P09601 288 aa26.58■■□□□ 1.85
RFC2-210ENST00000493156 NFATC2IPQ8NCF5 419 aa26.58■■□□□ 1.85
RFC2-210ENST00000493156 MYH14Q7Z406 1995 aaKnown RBP26.57■■□□□ 1.84
RFC2-210ENST00000493156 C4AP0C0L4 1744 aa26.56■■□□□ 1.84
RFC2-210ENST00000493156 RTCBQ9Y3I0 505 aaKnown RBP26.55■■□□□ 1.84
RFC2-210ENST00000493156 ADRA2BP18089 450 aa26.54■■□□□ 1.84
RFC2-210ENST00000493156 SLC52A2Q9HAB3 445 aa26.53■■□□□ 1.84
RFC2-210ENST00000493156 RPS6KA4O75676 772 aa26.52■■□□□ 1.84
RFC2-210ENST00000493156 YBX3P16989 372 aaKnown RBP eCLIP26.52■■□□□ 1.842e-7■■■■□ 20.9
RFC2-210ENST00000493156 MTHFSDQ2M296 383 aaKnown RBP26.52■■□□□ 1.84
RFC2-210ENST00000493156 ZNF784Q8NCA9 323 aaPredicted RBP26.52■■□□□ 1.84
RFC2-210ENST00000493156 RNMTO43148 476 aaKnown RBP26.51■■□□□ 1.83
RFC2-210ENST00000493156 PTCD1O75127 700 aaKnown RBP26.51■■□□□ 1.83
RFC2-210ENST00000493156 TRAPPC3LQ5T215 181 aa26.51■■□□□ 1.83
RFC2-210ENST00000493156 PELP1Q8IZL8 1130 aaKnown RBP26.51■■□□□ 1.83
RFC2-210ENST00000493156 LGR6Q9HBX8 967 aa26.51■■□□□ 1.83
RFC2-210ENST00000493156 KIF13BQ9NQT8 1826 aa26.51■■□□□ 1.83
RFC2-210ENST00000493156 KCPQ6ZWJ8 1503 aa26.49■■□□□ 1.83
RFC2-210ENST00000493156 ARHGEF1Q92888 912 aaKnown RBP26.49■■□□□ 1.83
RFC2-210ENST00000493156 UBR2Q8IWV8 1755 aa26.48■■□□□ 1.83
RFC2-210ENST00000493156 GRIN3BO60391 1043 aa26.48■■□□□ 1.83
RFC2-210ENST00000493156 CRKLP46109 303 aaKnown RBP26.47■■□□□ 1.83
RFC2-210ENST00000493156 CNGB1Q14028 1251 aaPredicted RBP26.47■■□□□ 1.83
RFC2-210ENST00000493156 KIAA1551Q9HCM1 1747 aa26.47■■□□□ 1.83
RFC2-210ENST00000493156 GOLGB1Q14789 3259 aaKnown RBP26.46■■□□□ 1.83
RFC2-210ENST00000493156 MMP10P09238 476 aa26.46■■□□□ 1.83
RFC2-210ENST00000493156 NLGN1Q8N2Q7 840 aa26.46■■□□□ 1.83
RFC2-210ENST00000493156 U2SURPO15042 1029 aaKnown RBP26.45■■□□□ 1.82
RFC2-210ENST00000493156 SIPA1L3O60292 1781 aaPredicted RBP26.44■■□□□ 1.82
RFC2-210ENST00000493156 GYS1P13807 737 aa26.44■■□□□ 1.82
RFC2-210ENST00000493156 C10orf71Q711Q0 1435 aa26.43■■□□□ 1.82
RFC2-210ENST00000493156 RFC4P35249 363 aa26.43■■□□□ 1.82
RFC2-210ENST00000493156 GAS2L2Q8NHY3 880 aa26.42■■□□□ 1.82
RFC2-210ENST00000493156 CFAP53Q96M91 514 aa26.42■■□□□ 1.82
RFC2-210ENST00000493156 SLC39A6Q13433 755 aa26.41■■□□□ 1.82
RFC2-210ENST00000493156 INTS5Q6P9B9 1019 aaKnown RBP26.41■■□□□ 1.82
RFC2-210ENST00000493156 DNAJC10Q8IXB1 793 aa26.41■■□□□ 1.82
RFC2-210ENST00000493156 PXDNLA1KZ92 1463 aa26.41■■□□□ 1.82
RFC2-210ENST00000493156 PPP2R1AP30153 589 aa26.4■■□□□ 1.82
RFC2-210ENST00000493156 USP42Q9H9J4 1324 aaKnown RBP26.39■■□□□ 1.82
RFC2-210ENST00000493156 VSIG10Q8N0Z9 540 aa26.38■■□□□ 1.81
RFC2-210ENST00000493156 RSPH6AQ9H0K4 717 aa26.38■■□□□ 1.81
RFC2-210ENST00000493156 CCDC87Q9NVE4 849 aa26.38■■□□□ 1.81
RFC2-210ENST00000493156 SOS1Q07889 1333 aaPredicted RBP26.38■■□□□ 1.81
RFC2-210ENST00000493156 GNAT3A8MTJ3 354 aa26.37■■□□□ 1.81
RFC2-210ENST00000493156 CYP19A1P11511 503 aaPredicted RBP26.37■■□□□ 1.81
RFC2-210ENST00000493156 CEMIPQ8WUJ3 1361 aa26.36■■□□□ 1.81
RFC2-210ENST00000493156 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
RFC2-210ENST00000493156 N4BP2Q86UW6 1770 aaPredicted RBP26.35■■□□□ 1.81
RFC2-210ENST00000493156 PRKAR2BP31323 418 aa26.35■■□□□ 1.81
RFC2-210ENST00000493156 SRP68Q9UHB9 627 aaKnown RBP26.35■■□□□ 1.81
RFC2-210ENST00000493156 TGFB2P61812 414 aa26.34■■□□□ 1.81
RFC2-210ENST00000493156 NUDCQ9Y266 331 aa26.34■■□□□ 1.81
RFC2-210ENST00000493156 BRCA1P38398 1863 aaKnown RBP26.34■■□□□ 1.81
RFC2-210ENST00000493156 PHACTR3Q96KR7 559 aa26.33■■□□□ 1.81
RFC2-210ENST00000493156 PARP3Q9Y6F1 533 aa26.33■■□□□ 1.81
RFC2-210ENST00000493156 TEFQ10587 303 aa26.32■■□□□ 1.8
RFC2-210ENST00000493156 FKBP8Q14318 412 aa26.32■■□□□ 1.8
RFC2-210ENST00000493156 ADCY9O60503 1353 aa26.32■■□□□ 1.8
RFC2-210ENST00000493156 COL15A1P39059 1388 aa26.32■■□□□ 1.8
RFC2-210ENST00000493156 TTC5Q8N0Z6 440 aa26.31■■□□□ 1.8
RFC2-210ENST00000493156 ZBTB1Q9Y2K1 713 aa26.31■■□□□ 1.8
RFC2-210ENST00000493156 DDR1Q08345 913 aa26.3■■□□□ 1.8
RFC2-210ENST00000493156 ZNF790Q6PG37 636 aa26.29■■□□□ 1.8
RFC2-210ENST00000493156 WWC3Q9ULE0 1092 aa26.29■■□□□ 1.8
RFC2-210ENST00000493156 HEG1Q9ULI3 1381 aa26.29■■□□□ 1.8
RFC2-210ENST00000493156 FCHSD2O94868 740 aa26.28■■□□□ 1.8
RFC2-210ENST00000493156 U2AF1L5P0DN76 240 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms