RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
COL12A1-209ENST00000493109 PHKA2P46019 1235 aa12.16□□□□□ -0.46
COL12A1-209ENST00000493109 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
COL12A1-209ENST00000493109 ADAM23O75077 832 aa12.15□□□□□ -0.46
COL12A1-209ENST00000493109 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
COL12A1-209ENST00000493109 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
COL12A1-209ENST00000493109 CFHR5Q9BXR6 569 aa12.15□□□□□ -0.46
COL12A1-209ENST00000493109 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
COL12A1-209ENST00000493109 STAU1O95793 577 aaKnown RBP12.14□□□□□ -0.47
COL12A1-209ENST00000493109 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
COL12A1-209ENST00000493109 BCANQ96GW7 911 aa12.14□□□□□ -0.47
COL12A1-209ENST00000493109 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
COL12A1-209ENST00000493109 TSGA10IPQ3SY00 556 aa12.13□□□□□ -0.47
COL12A1-209ENST00000493109 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
COL12A1-209ENST00000493109 MAP2K3P46734 347 aa12.12□□□□□ -0.47
COL12A1-209ENST00000493109 C4orf17Q53FE4 359 aa12.12□□□□□ -0.47
COL12A1-209ENST00000493109 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-209ENST00000493109 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-209ENST00000493109 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
COL12A1-209ENST00000493109 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-209ENST00000493109 A0A1B0GTH6 734 aa12.1□□□□□ -0.47
COL12A1-209ENST00000493109 KRBA1A5PL33 1030 aa12.1□□□□□ -0.47
COL12A1-209ENST00000493109 C2CD2LO14523 706 aa12.1□□□□□ -0.47
COL12A1-209ENST00000493109 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
COL12A1-209ENST00000493109 RUBCNLQ9H714 662 aa12.1□□□□□ -0.47
COL12A1-209ENST00000493109 COL8A1P27658 744 aa12.09□□□□□ -0.47
COL12A1-209ENST00000493109 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
COL12A1-209ENST00000493109 PHTF2Q8N3S3 785 aa12.08□□□□□ -0.48
COL12A1-209ENST00000493109 GALNT6Q8NCL4 622 aa12.08□□□□□ -0.48
COL12A1-209ENST00000493109 NDFIP2Q9NV92 336 aa12.08□□□□□ -0.48
COL12A1-209ENST00000493109 MSX1P28360 303 aa12.07□□□□□ -0.48
COL12A1-209ENST00000493109 XP32Q5T750 250 aa12.07□□□□□ -0.48
COL12A1-209ENST00000493109 ESF1Q9H501 851 aaKnown RBP12.07□□□□□ -0.48
COL12A1-209ENST00000493109 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
COL12A1-209ENST00000493109 MYCP01106 439 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-209ENST00000493109 ABHD17AQ96GS6 310 aa12.05□□□□□ -0.48
COL12A1-209ENST00000493109 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
COL12A1-209ENST00000493109 TMEM214Q6NUQ4 689 aaKnown RBP12.04□□□□□ -0.48
COL12A1-209ENST00000493109 EDARADDQ8WWZ3 215 aa12.04□□□□□ -0.48
COL12A1-209ENST00000493109 HCN2Q9UL51 889 aa12.04□□□□□ -0.48
COL12A1-209ENST00000493109 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
COL12A1-209ENST00000493109 BNIP3LO60238 219 aa12.03□□□□□ -0.48
COL12A1-209ENST00000493109 CTBSQ01459 385 aa12.03□□□□□ -0.48
COL12A1-209ENST00000493109 GNASQ5JWF2 1037 aa12.03□□□□□ -0.48
COL12A1-209ENST00000493109 PHF24Q9UPV7 400 aa12.03□□□□□ -0.48
COL12A1-209ENST00000493109 IRF5Q13568 498 aa12.02□□□□□ -0.49
COL12A1-209ENST00000493109 LINC00114Q6XXX2 140 aa12.02□□□□□ -0.49
COL12A1-209ENST00000493109 PPARGC1BQ86YN6 1023 aaKnown RBP12.02□□□□□ -0.49
COL12A1-209ENST00000493109 SUV39H2Q9H5I1 410 aa12.02□□□□□ -0.49
COL12A1-209ENST00000493109 DNAAF2Q9NVR5 837 aaKnown RBP12.02□□□□□ -0.49
COL12A1-209ENST00000493109 GDF2Q9UK05 429 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-209ENST00000493109 MKL2Q9ULH7 1088 aa12.02□□□□□ -0.49
COL12A1-209ENST00000493109 ATXN7L1Q9ULK2 861 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-209ENST00000493109 RHBDD1Q8TEB9 315 aa12.01□□□□□ -0.49
COL12A1-209ENST00000493109 CRISPLD1Q9H336 500 aa12.01□□□□□ -0.49
COL12A1-209ENST00000493109 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
COL12A1-209ENST00000493109 CHIC2Q9UKJ5 165 aa12□□□□□ -0.49
COL12A1-209ENST00000493109 FGFR3P22607 806 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 BAG6P46379 1132 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 SCNN1DP51172 638 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 SLCO4C1Q6ZQN7 724 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 GGA1Q9UJY5 639 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 DOLKQ9UPQ8 538 aa11.99□□□□□ -0.49
COL12A1-209ENST00000493109 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
COL12A1-209ENST00000493109 BMP4P12644 408 aa11.98□□□□□ -0.49
COL12A1-209ENST00000493109 ATP4AP20648 1035 aa11.98□□□□□ -0.49
COL12A1-209ENST00000493109 TLR1Q15399 786 aa11.98□□□□□ -0.49
COL12A1-209ENST00000493109 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
COL12A1-209ENST00000493109 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
COL12A1-209ENST00000493109 EFHC2Q5JST6 749 aa11.97□□□□□ -0.49
COL12A1-209ENST00000493109 K7ELQ4 463 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-209ENST00000493109 PLA2G4AP47712 749 aa11.96□□□□□ -0.49
COL12A1-209ENST00000493109 APBB1O00213 710 aa11.95□□□□□ -0.5
COL12A1-209ENST00000493109 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-209ENST00000493109 USP4Q13107 963 aa11.95□□□□□ -0.5
COL12A1-209ENST00000493109 OXLD1Q5BKU9 147 aa11.95□□□□□ -0.5
COL12A1-209ENST00000493109 ZNF295-AS1Q8N0V1 137 aa11.95□□□□□ -0.5
COL12A1-209ENST00000493109 EPXP11678 715 aa11.94□□□□□ -0.5
COL12A1-209ENST00000493109 GRIN2CQ14957 1233 aa11.94□□□□□ -0.5
COL12A1-209ENST00000493109 RNF135Q8IUD6 432 aa11.94□□□□□ -0.5
COL12A1-209ENST00000493109 DGKGP49619 791 aa11.93□□□□□ -0.5
COL12A1-209ENST00000493109 BTBD6Q96KE9 485 aa11.93□□□□□ -0.5
COL12A1-209ENST00000493109 ZCCHC2Q9C0B9 1178 aaKnown RBP11.93□□□□□ -0.5
COL12A1-209ENST00000493109 FURINP09958 794 aa11.92□□□□□ -0.5
COL12A1-209ENST00000493109 SLFNL1Q499Z3 407 aa11.92□□□□□ -0.5
COL12A1-209ENST00000493109 ALYREFQ86V81 257 aaKnown RBP11.92□□□□□ -0.5
COL12A1-209ENST00000493109 KLF15Q9UIH9 416 aa11.92□□□□□ -0.5
COL12A1-209ENST00000493109 INHAP05111 366 aa11.91□□□□□ -0.5
COL12A1-209ENST00000493109 ARAFP10398 606 aa11.91□□□□□ -0.5
COL12A1-209ENST00000493109 GDF10P55107 478 aa11.91□□□□□ -0.5
COL12A1-209ENST00000493109 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL12A1-209ENST00000493109 TBC1D9Q6ZT07 1266 aa11.91□□□□□ -0.5
COL12A1-209ENST00000493109 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
COL12A1-209ENST00000493109 AMPD1P23109 780 aa11.9□□□□□ -0.5
COL12A1-209ENST00000493109 VAC14Q08AM6 782 aa11.9□□□□□ -0.5
COL12A1-209ENST00000493109 USP3Q9Y6I4 520 aa11.9□□□□□ -0.5
COL12A1-209ENST00000493109 PCDHGC4Q9Y5F7 938 aa11.89□□□□□ -0.51
COL12A1-209ENST00000493109 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
COL12A1-209ENST00000493109 CD163Q86VB7 1156 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms