RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 MSL1Q68DK7 614 aa22.21■■□□□ 1.15
C9orf78-206ENST00000492991 ZNF530Q6P9A1 599 aaPredicted RBP22.21■■□□□ 1.15
C9orf78-206ENST00000492991 ZNF784Q8NCA9 323 aaPredicted RBP22.21■■□□□ 1.15
C9orf78-206ENST00000492991 NLGN2Q8NFZ4 835 aa22.21■■□□□ 1.15
C9orf78-206ENST00000492991 CHD4Q14839 1912 aa22.2■■□□□ 1.14
C9orf78-206ENST00000492991 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
C9orf78-206ENST00000492991 AMIGO3Q86WK7 504 aa22.2■■□□□ 1.14
C9orf78-206ENST00000492991 GRIN3BO60391 1043 aa22.19■■□□□ 1.14
C9orf78-206ENST00000492991 MTHFSP49914 203 aa22.19■■□□□ 1.14
C9orf78-206ENST00000492991 C1orf141Q5JVX7 400 aa22.19■■□□□ 1.14
C9orf78-206ENST00000492991 RC3H1Q5TC82 1133 aaKnown RBP22.19■■□□□ 1.14
C9orf78-206ENST00000492991 AEBP1Q8IUX7 1158 aa22.19■■□□□ 1.14
C9orf78-206ENST00000492991 UBR3Q6ZT12 1888 aa22.19■■□□□ 1.14
C9orf78-206ENST00000492991 CABP4P57796 275 aa22.18■■□□□ 1.14
C9orf78-206ENST00000492991 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
C9orf78-206ENST00000492991 KDM6AO15550 1401 aaPredicted RBP22.16■■□□□ 1.14
C9orf78-206ENST00000492991 NPC1L1Q9UHC9 1359 aa22.16■■□□□ 1.14
C9orf78-206ENST00000492991 GNPATO15228 680 aa22.16■■□□□ 1.14
C9orf78-206ENST00000492991 PHF14O94880 888 aa22.16■■□□□ 1.14
C9orf78-206ENST00000492991 SLC4A9Q96Q91 983 aa22.15■■□□□ 1.14
C9orf78-206ENST00000492991 ADRA2BP18089 450 aa22.14■■□□□ 1.13
C9orf78-206ENST00000492991 RTCBQ9Y3I0 505 aaKnown RBP22.14■■□□□ 1.13
C9orf78-206ENST00000492991 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
C9orf78-206ENST00000492991 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
C9orf78-206ENST00000492991 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
C9orf78-206ENST00000492991 RBM42Q9BTD8 480 aaKnown RBP22.13■■□□□ 1.13
C9orf78-206ENST00000492991 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.139e-13■■□□□ 14.1
C9orf78-206ENST00000492991 TRAPPC3LQ5T215 181 aa22.12■■□□□ 1.13
C9orf78-206ENST00000492991 SMIM5Q71RC9 77 aa22.12■■□□□ 1.13
C9orf78-206ENST00000492991 NFATC2IPQ8NCF5 419 aa22.12■■□□□ 1.13
C9orf78-206ENST00000492991 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
C9orf78-206ENST00000492991 RPS6KA4O75676 772 aa22.11■■□□□ 1.13
C9orf78-206ENST00000492991 NLGN1Q8N2Q7 840 aa22.11■■□□□ 1.13
C9orf78-206ENST00000492991 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
C9orf78-206ENST00000492991 CC2D1BQ5T0F9 858 aaKnown RBP22.08■■□□□ 1.13
C9orf78-206ENST00000492991 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
C9orf78-206ENST00000492991 PTCD1O75127 700 aaKnown RBP22.06■■□□□ 1.12
C9orf78-206ENST00000492991 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
C9orf78-206ENST00000492991 MMP10P09238 476 aa22.05■■□□□ 1.12
C9orf78-206ENST00000492991 RNMTO43148 476 aaKnown RBP22.04■■□□□ 1.12
C9orf78-206ENST00000492991 HMOX1P09601 288 aa22.04■■□□□ 1.12
C9orf78-206ENST00000492991 RFC4P35249 363 aa22.04■■□□□ 1.12
C9orf78-206ENST00000492991 COL5A3P25940 1745 aaPredicted RBP22.03■■□□□ 1.12
C9orf78-206ENST00000492991 GYS1P13807 737 aa22.03■■□□□ 1.12
C9orf78-206ENST00000492991 CRKLP46109 303 aaKnown RBP22.03■■□□□ 1.12
C9orf78-206ENST00000492991 LGR6Q9HBX8 967 aa22.03■■□□□ 1.12
C9orf78-206ENST00000492991 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
C9orf78-206ENST00000492991 TGFB2P61812 414 aa22.02■■□□□ 1.12
C9orf78-206ENST00000492991 MTHFSDQ2M296 383 aaKnown RBP22.02■■□□□ 1.12
C9orf78-206ENST00000492991 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.11
C9orf78-206ENST00000492991 MRC1P22897 1456 aa22■■□□□ 1.11
C9orf78-206ENST00000492991 MYH14Q7Z406 1995 aaKnown RBP21.99■■□□□ 1.11
C9orf78-206ENST00000492991 INTS5Q6P9B9 1019 aaKnown RBP21.99■■□□□ 1.11
C9orf78-206ENST00000492991 COL3A1P02461 1466 aaPredicted RBP21.98■■□□□ 1.11
C9orf78-206ENST00000492991 C1QTNF8P60827 252 aa21.98■■□□□ 1.11
C9orf78-206ENST00000492991 VSIG10Q8N0Z9 540 aa21.98■■□□□ 1.11
C9orf78-206ENST00000492991 CCDC87Q9NVE4 849 aa21.98■■□□□ 1.11
C9orf78-206ENST00000492991 PARP3Q9Y6F1 533 aa21.97■■□□□ 1.11
C9orf78-206ENST00000492991 ADAMTS7Q9UKP4 1686 aa21.97■■□□□ 1.11
C9orf78-206ENST00000492991 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
C9orf78-206ENST00000492991 USP42Q9H9J4 1324 aaKnown RBP21.96■■□□□ 1.11
C9orf78-206ENST00000492991 C10orf71Q711Q0 1435 aa21.96■■□□□ 1.11
C9orf78-206ENST00000492991 KIF13BQ9NQT8 1826 aa21.95■■□□□ 1.1
C9orf78-206ENST00000492991 CYP19A1P11511 503 aaPredicted RBP21.95■■□□□ 1.1
C9orf78-206ENST00000492991 DNAJC10Q8IXB1 793 aa21.95■■□□□ 1.1
C9orf78-206ENST00000492991 GIGYF1O75420 1035 aaPredicted RBP21.94■■□□□ 1.1
C9orf78-206ENST00000492991 PXDNLA1KZ92 1463 aa21.94■■□□□ 1.1
C9orf78-206ENST00000492991 TJP1Q07157 1748 aa21.94■■□□□ 1.1
C9orf78-206ENST00000492991 U2SURPO15042 1029 aaKnown RBP21.93■■□□□ 1.1
C9orf78-206ENST00000492991 SLC39A6Q13433 755 aa21.93■■□□□ 1.1
C9orf78-206ENST00000492991 CFAP53Q96M91 514 aa21.93■■□□□ 1.1
C9orf78-206ENST00000492991 ADCY9O60503 1353 aa21.92■■□□□ 1.1
C9orf78-206ENST00000492991 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
C9orf78-206ENST00000492991 GNAT3A8MTJ3 354 aa21.92■■□□□ 1.1
C9orf78-206ENST00000492991 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
C9orf78-206ENST00000492991 TM4SF1P30408 202 aa21.91■■□□□ 1.1
C9orf78-206ENST00000492991 FKBP8Q14318 412 aa21.91■■□□□ 1.1
C9orf78-206ENST00000492991 IL17REQ8NFR9 667 aa21.91■■□□□ 1.1
C9orf78-206ENST00000492991 SRP68Q9UHB9 627 aaKnown RBP21.91■■□□□ 1.1
C9orf78-206ENST00000492991 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
C9orf78-206ENST00000492991 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
C9orf78-206ENST00000492991 ZPR1O75312 459 aa21.9■■□□□ 1.1
C9orf78-206ENST00000492991 NUDCQ9Y266 331 aa21.9■■□□□ 1.1
C9orf78-206ENST00000492991 ATP10DQ9P241 1426 aa21.89■■□□□ 1.1
C9orf78-206ENST00000492991 TEFQ10587 303 aa21.89■■□□□ 1.09
C9orf78-206ENST00000492991 STARD3NLO95772 234 aa21.88■■□□□ 1.09
C9orf78-206ENST00000492991 DPEP1P16444 411 aa21.88■■□□□ 1.09
C9orf78-206ENST00000492991 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
C9orf78-206ENST00000492991 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
C9orf78-206ENST00000492991 NARFQ9UHQ1 456 aa21.88■■□□□ 1.09
C9orf78-206ENST00000492991 KIAA1551Q9HCM1 1747 aa21.87■■□□□ 1.09
C9orf78-206ENST00000492991 KCNA3P22001 575 aa21.87■■□□□ 1.09
C9orf78-206ENST00000492991 DDR1Q08345 913 aa21.87■■□□□ 1.09
C9orf78-206ENST00000492991 CNGB1Q14028 1251 aaPredicted RBP21.87■■□□□ 1.09
C9orf78-206ENST00000492991 CEMIPQ8WUJ3 1361 aa21.87■■□□□ 1.09
C9orf78-206ENST00000492991 POLRMTO00411 1230 aaKnown RBP21.86■■□□□ 1.09
C9orf78-206ENST00000492991 PPP2R1AP30153 589 aa21.86■■□□□ 1.09
C9orf78-206ENST00000492991 ZNF790Q6PG37 636 aa21.86■■□□□ 1.09
C9orf78-206ENST00000492991 RSPH6AQ9H0K4 717 aa21.86■■□□□ 1.09
C9orf78-206ENST00000492991 GPBP1L1Q9HC44 474 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms