RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
SMARCC1-208ENST00000492896 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
SMARCC1-208ENST00000492896 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
SMARCC1-208ENST00000492896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.555e-11■□□□□ 8.4
SMARCC1-208ENST00000492896 C5P01031 1676 aa11.59□□□□□ -0.55
SMARCC1-208ENST00000492896 PLCH1Q4KWH8 1693 aa11.59□□□□□ -0.55
SMARCC1-208ENST00000492896 CCDC30Q5VVM6 783 aa11.59□□□□□ -0.55
SMARCC1-208ENST00000492896 MPRIPQ6WCQ1 1025 aa11.59□□□□□ -0.55
SMARCC1-208ENST00000492896 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
SMARCC1-208ENST00000492896 KDM6AO15550 1401 aaPredicted RBP11.59□□□□□ -0.55
SMARCC1-208ENST00000492896 HOXB7P09629 217 aa11.58□□□□□ -0.56
SMARCC1-208ENST00000492896 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
SMARCC1-208ENST00000492896 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
SMARCC1-208ENST00000492896 BTBD11A6QL63 1104 aa11.57□□□□□ -0.56
SMARCC1-208ENST00000492896 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
SMARCC1-208ENST00000492896 PHKG2P15735 406 aa11.57□□□□□ -0.56
SMARCC1-208ENST00000492896 HDAC1Q13547 482 aaPredicted RBP11.57□□□□□ -0.56
SMARCC1-208ENST00000492896 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
SMARCC1-208ENST00000492896 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 EIF4A1P60842 406 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 NRAPQ86VF7 1730 aa11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 IFNL2Q8IZJ0 200 aa11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
SMARCC1-208ENST00000492896 ZBTB7BO15156 539 aaPredicted RBP11.55□□□□□ -0.56
SMARCC1-208ENST00000492896 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
SMARCC1-208ENST00000492896 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 RGS3P49796 1198 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 FLIIQ13045 1269 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 G2E3Q7L622 706 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 TOGARAM1Q9Y4F4 1720 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 PCDH11XQ9BZA7 1347 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 PCDH11YQ9BZA8 1340 aa11.54□□□□□ -0.56
SMARCC1-208ENST00000492896 NWD2Q9ULI1 1742 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 KCNQ3O43525 872 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 CCT4P50991 539 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 EVA1CP58658 441 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 DCAF5Q96JK2 942 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 GLI3P10071 1580 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 HEG1Q9ULI3 1381 aa11.53□□□□□ -0.56
SMARCC1-208ENST00000492896 CYP27B1O15528 508 aa11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 IL2RBP14784 551 aa11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 PDE4AP27815 886 aa11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 SMC5Q8IY18 1101 aa11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 C1orf115Q9H7X2 142 aa11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 ATP10DQ9P241 1426 aa11.52□□□□□ -0.57
SMARCC1-208ENST00000492896 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-208ENST00000492896 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-208ENST00000492896 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
SMARCC1-208ENST00000492896 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
SMARCC1-208ENST00000492896 ITGB4P16144 1822 aa11.51□□□□□ -0.57
SMARCC1-208ENST00000492896 F6X3S4 739 aa11.5□□□□□ -0.57
SMARCC1-208ENST00000492896 TOM1O60784 492 aa11.5□□□□□ -0.57
SMARCC1-208ENST00000492896 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
SMARCC1-208ENST00000492896 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
SMARCC1-208ENST00000492896 CHPF2Q9P2E5 772 aa11.5□□□□□ -0.57
SMARCC1-208ENST00000492896 GIGYF1O75420 1035 aaPredicted RBP11.49□□□□□ -0.57
SMARCC1-208ENST00000492896 ZNF790Q6PG37 636 aa11.49□□□□□ -0.57
SMARCC1-208ENST00000492896 GCC1Q96CN9 775 aa11.49□□□□□ -0.57
SMARCC1-208ENST00000492896 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
SMARCC1-208ENST00000492896 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
SMARCC1-208ENST00000492896 LRP6O75581 1613 aa11.49□□□□□ -0.57
SMARCC1-208ENST00000492896 CABP4P57796 275 aa11.48□□□□□ -0.57
SMARCC1-208ENST00000492896 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
SMARCC1-208ENST00000492896 MEIS3Q99687 375 aa11.48□□□□□ -0.57
SMARCC1-208ENST00000492896 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
SMARCC1-208ENST00000492896 AFDNP55196 1824 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-208ENST00000492896 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
SMARCC1-208ENST00000492896 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
SMARCC1-208ENST00000492896 ANKRD44Q8N8A2 993 aa11.47□□□□□ -0.57
SMARCC1-208ENST00000492896 NFATC2IPQ8NCF5 419 aa11.47□□□□□ -0.57
SMARCC1-208ENST00000492896 PHAXQ9H814 394 aaKnown RBP11.47□□□□□ -0.57
SMARCC1-208ENST00000492896 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 GNAI3P08754 354 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 NUCB1Q02818 461 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 C8orf34Q49A92 452 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 CEP85Q6P2H3 762 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 RPAP2Q8IXW5 612 aaPredicted RBP11.46□□□□□ -0.57
SMARCC1-208ENST00000492896 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
SMARCC1-208ENST00000492896 GNAI2P04899 355 aa11.45□□□□□ -0.58
SMARCC1-208ENST00000492896 ANP32AP39687 249 aaKnown RBP11.45□□□□□ -0.58
SMARCC1-208ENST00000492896 FMNL2Q96PY5 1086 aa11.45□□□□□ -0.58
SMARCC1-208ENST00000492896 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
SMARCC1-208ENST00000492896 ADCY9O60503 1353 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 NUP188Q5SRE5 1749 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 HMMRO75330 724 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms