RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TOM1O60784 492 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 KCNH2Q12809 1159 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 SPSB2Q99619 263 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 PTPRGP23470 1445 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 C9orf84Q5VXU9 1444 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 DPYDQ12882 1025 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 GLYCTKQ8IVS8 523 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 CLP1Q92989 425 aaKnown RBP4.71□□□□□ -1.66
SNX13-209ENST00000492626 HINFPQ9BQA5 517 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 MYCP01106 439 aaPredicted RBP4.7□□□□□ -1.66
SNX13-209ENST00000492626 SEC13P55735 322 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 ADAM32Q8TC27 787 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 BCL2L13Q9BXK5 485 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 NBPF20Q3BBV1 942 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 ZSCAN29Q8IWY8 852 aaPredicted RBP4.7□□□□□ -1.66
SNX13-209ENST00000492626 ZNF687Q8N1G0 1237 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 WNT2BQ93097 391 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 ZNF428Q96B54 188 aa4.7□□□□□ -1.66
SNX13-209ENST00000492626 BPHLQ86WA6 291 aaPredicted RBP4.69□□□□□ -1.66
SNX13-209ENST00000492626 TRAPPC8Q9Y2L5 1435 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 GTF2IP78347 998 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 LARGE2Q8N3Y3 721 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 EVA1BQ9NVM1 165 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 TDRD9Q8NDG6 1382 aaKnown RBP4.69□□□□□ -1.66
SNX13-209ENST00000492626 USP4Q13107 963 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 MSS51Q4VC12 460 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 CRTC2Q53ET0 693 aaPredicted RBP4.69□□□□□ -1.66
SNX13-209ENST00000492626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.69□□□□□ -1.66
SNX13-209ENST00000492626 ZMIZ1Q9ULJ6 1067 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 MED14O60244 1454 aa4.69□□□□□ -1.66
SNX13-209ENST00000492626 F12P00748 615 aaPredicted RBP4.68□□□□□ -1.66
SNX13-209ENST00000492626 SSFA2P28290 1259 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 TPCN2Q8NHX9 752 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 IQGAP2Q13576 1575 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 PTK7Q13308 1070 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 ANKRD13DQ6ZTN6 518 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 FAM174AQ8TBP5 190 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 CDV3Q9UKY7 258 aaKnown RBP4.68□□□□□ -1.66
SNX13-209ENST00000492626 SOWAHBA6NEL2 793 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 ADGRD1Q6QNK2 874 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 TXNDC2Q86VQ3 553 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 MYO3AQ8NEV4 1616 aa4.68□□□□□ -1.66
SNX13-209ENST00000492626 GOLGA3Q08378 1498 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 HMGB1P09429 215 aaKnown RBP4.67□□□□□ -1.66
SNX13-209ENST00000492626 COPS2P61201 443 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 CCDC102BQ68D86 513 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 WRNQ14191 1432 aaPredicted RBP eCLIP4.67□□□□□ -1.66
SNX13-209ENST00000492626 SOWAHDA6NJG2 315 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 POTEJP0CG39 1038 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 GIPC2Q8TF65 315 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 DENND4BO75064 1496 aaPredicted RBP4.67□□□□□ -1.66
SNX13-209ENST00000492626 ARHGAP23Q9P227 1491 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 ALKQ9UM73 1620 aa4.67□□□□□ -1.66
SNX13-209ENST00000492626 PRMT3O60678 531 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 DXOO77932 396 aaKnown RBP4.66□□□□□ -1.66
SNX13-209ENST00000492626 SERPINB4P48594 390 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 BCAMP50895 628 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 AAMPQ13685 434 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 PCDHB11Q9Y5F2 797 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 FAM135BQ49AJ0 1406 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 ATP10AO60312 1499 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 H3BRB1 525 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 ZBTB24O43167 697 aaPredicted RBP4.66□□□□□ -1.66
SNX13-209ENST00000492626 APLP1P51693 650 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 LSM11P83369 360 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNX13-209ENST00000492626 MARVELD3Q96A59 401 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 TUT1Q9H6E5 874 aaKnown RBP4.66□□□□□ -1.66
SNX13-209ENST00000492626 VWDEQ8N2E2 1590 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 LRRC7Q96NW7 1537 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 RAB15P59190 212 aa4.66□□□□□ -1.66
SNX13-209ENST00000492626 RBM47A0AV96 593 aaKnown RBP4.65□□□□□ -1.66
SNX13-209ENST00000492626 ADH1BP00325 375 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 MAPK1P28482 360 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 CAMSAP1Q5T5Y3 1602 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 ATP10BO94823 1461 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 AATKQ6ZMQ8 1374 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 POTEB2H3BUK9 544 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 FGD1P98174 961 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 UNC93B1Q9H1C4 597 aa4.65□□□□□ -1.66
SNX13-209ENST00000492626 NYAP1Q6ZVC0 841 aa4.65□□□□□ -1.67
SNX13-209ENST00000492626 TMC1Q8TDI8 760 aa4.65□□□□□ -1.67
SNX13-209ENST00000492626 PRIMPOLQ96LW4 560 aa4.65□□□□□ -1.67
SNX13-209ENST00000492626 SLC6A16Q9GZN6 736 aa4.65□□□□□ -1.67
SNX13-209ENST00000492626 CHMP3Q9Y3E7 222 aa4.65□□□□□ -1.67
SNX13-209ENST00000492626 KDM5AP29375 1690 aaKnown RBP4.65□□□□□ -1.67
SNX13-209ENST00000492626 SF3B2Q13435 895 aaKnown RBP4.64□□□□□ -1.67
SNX13-209ENST00000492626 EGFL7Q9UHF1 273 aa4.64□□□□□ -1.67
SNX13-209ENST00000492626 PTCD1O75127 700 aaKnown RBP4.64□□□□□ -1.67
SNX13-209ENST00000492626 C1orf216Q8TAB5 229 aa4.64□□□□□ -1.67
SNX13-209ENST00000492626 MRRFQ96E11 262 aaKnown RBP4.64□□□□□ -1.67
SNX13-209ENST00000492626 XIRP1Q702N8 1843 aaKnown RBP4.64□□□□□ -1.67
SNX13-209ENST00000492626 BHMG1C9JSJ3 638 aaPredicted RBP4.64□□□□□ -1.67
SNX13-209ENST00000492626 LINC01559Q495D7 138 aa4.64□□□□□ -1.67
SNX13-209ENST00000492626 SHANK2Q9UPX8 1470 aa4.64□□□□□ -1.67
SNX13-209ENST00000492626 MMP16P51512 607 aa4.63□□□□□ -1.67
SNX13-209ENST00000492626 SEPT12Q8IYM1 358 aa4.63□□□□□ -1.67
SNX13-209ENST00000492626 CEP170BQ9Y4F5 1589 aaPredicted RBP4.63□□□□□ -1.67
SNX13-209ENST00000492626 ANKRD33BA6NCL7 494 aa4.63□□□□□ -1.67
SNX13-209ENST00000492626 BACH1O14867 736 aa4.63□□□□□ -1.67
SNX13-209ENST00000492626 THAP11Q96EK4 314 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms