RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
TNFRSF9-203ENST00000492571 FLAD1Q8NFF5 587 aa13.74□□□□□ -0.21
TNFRSF9-203ENST00000492571 GPBP1L1Q9HC44 474 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF9-203ENST00000492571 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
TNFRSF9-203ENST00000492571 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
TNFRSF9-203ENST00000492571 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
TNFRSF9-203ENST00000492571 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
TNFRSF9-203ENST00000492571 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF9-203ENST00000492571 RAPGEF4Q8WZA2 1011 aa13.72□□□□□ -0.21
TNFRSF9-203ENST00000492571 CD2APQ9Y5K6 639 aa13.72□□□□□ -0.21
TNFRSF9-203ENST00000492571 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
TNFRSF9-203ENST00000492571 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
TNFRSF9-203ENST00000492571 YBX3P16989 372 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFRSF9-203ENST00000492571 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF9-203ENST00000492571 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
TNFRSF9-203ENST00000492571 PAPPAQ13219 1627 aa13.71□□□□□ -0.22
TNFRSF9-203ENST00000492571 HOXC9P31274 260 aa13.7□□□□□ -0.22
TNFRSF9-203ENST00000492571 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF9-203ENST00000492571 BTAF1O14981 1849 aa13.69□□□□□ -0.22
TNFRSF9-203ENST00000492571 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
TNFRSF9-203ENST00000492571 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF9-203ENST00000492571 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
TNFRSF9-203ENST00000492571 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF9-203ENST00000492571 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
TNFRSF9-203ENST00000492571 PLCG2P16885 1265 aa13.67□□□□□ -0.22
TNFRSF9-203ENST00000492571 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF9-203ENST00000492571 AK7Q96M32 723 aa13.67□□□□□ -0.22
TNFRSF9-203ENST00000492571 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
TNFRSF9-203ENST00000492571 CEP350Q5VT06 3117 aa13.66□□□□□ -0.22
TNFRSF9-203ENST00000492571 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
TNFRSF9-203ENST00000492571 ATP10DQ9P241 1426 aa13.66□□□□□ -0.22
TNFRSF9-203ENST00000492571 HSPA6P17066 643 aa13.66□□□□□ -0.22
TNFRSF9-203ENST00000492571 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
TNFRSF9-203ENST00000492571 ZNF526Q8TF50 670 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF9-203ENST00000492571 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
TNFRSF9-203ENST00000492571 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
TNFRSF9-203ENST00000492571 MON2Q7Z3U7 1717 aa13.64□□□□□ -0.23
TNFRSF9-203ENST00000492571 LCE2DQ5TA82 110 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF9-203ENST00000492571 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
TNFRSF9-203ENST00000492571 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
TNFRSF9-203ENST00000492571 NSD2O96028 1365 aa13.63□□□□□ -0.23
TNFRSF9-203ENST00000492571 FBLN1P23142 703 aa13.63□□□□□ -0.23
TNFRSF9-203ENST00000492571 LTN1O94822 1766 aa13.63□□□□□ -0.23
TNFRSF9-203ENST00000492571 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 TONSLQ96HA7 1378 aa13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 PSEN1P49768 467 aa13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 RRS1Q15050 365 aaKnown RBP13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
TNFRSF9-203ENST00000492571 USP54Q70EL1 1684 aa13.61□□□□□ -0.23
TNFRSF9-203ENST00000492571 POTEMA6NI47 508 aa13.61□□□□□ -0.23
TNFRSF9-203ENST00000492571 PHF14O94880 888 aa13.61□□□□□ -0.23
TNFRSF9-203ENST00000492571 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
TNFRSF9-203ENST00000492571 QSER1Q2KHR3 1735 aa13.61□□□□□ -0.23
TNFRSF9-203ENST00000492571 IGSF1Q8N6C5 1336 aa13.61□□□□□ -0.23
TNFRSF9-203ENST00000492571 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
TNFRSF9-203ENST00000492571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
TNFRSF9-203ENST00000492571 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
TNFRSF9-203ENST00000492571 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 MEGF6O75095 1541 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 FYB1O15117 783 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 SSFA2P28290 1259 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 SPG7Q9UQ90 795 aa13.59□□□□□ -0.23
TNFRSF9-203ENST00000492571 TMF1P82094 1093 aa13.58□□□□□ -0.24
TNFRSF9-203ENST00000492571 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
TNFRSF9-203ENST00000492571 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
TNFRSF9-203ENST00000492571 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF9-203ENST00000492571 APLP1P51693 650 aa13.57□□□□□ -0.24
TNFRSF9-203ENST00000492571 INSRP06213 1382 aa13.57□□□□□ -0.24
TNFRSF9-203ENST00000492571 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 CYP27B1O15528 508 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 SIK1P57059 783 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 TESK2Q96S53 571 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 FLT4P35916 1363 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
TNFRSF9-203ENST00000492571 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-203ENST00000492571 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
TNFRSF9-203ENST00000492571 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
TNFRSF9-203ENST00000492571 PIGBQ92521 554 aa13.55□□□□□ -0.24
TNFRSF9-203ENST00000492571 LY75O60449 1722 aa13.55□□□□□ -0.24
TNFRSF9-203ENST00000492571 ADCY9O60503 1353 aa13.55□□□□□ -0.24
TNFRSF9-203ENST00000492571 GNPATO15228 680 aa13.54□□□□□ -0.24
TNFRSF9-203ENST00000492571 TOMM70O94826 608 aa13.54□□□□□ -0.24
TNFRSF9-203ENST00000492571 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
TNFRSF9-203ENST00000492571 TGFB2P61812 414 aa13.54□□□□□ -0.24
TNFRSF9-203ENST00000492571 KIF3CO14782 793 aa13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 TRAPPC3LQ5T215 181 aa13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 NLGN1Q8N2Q7 840 aa13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
TNFRSF9-203ENST00000492571 MMP10P09238 476 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms