RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 IFNL2Q8IZJ0 200 aa19.07■□□□□ 0.64
GPNMB-213ENST00000492512 KIAA1551Q9HCM1 1747 aa19.07■□□□□ 0.64
GPNMB-213ENST00000492512 ANKRD26Q9UPS8 1709 aa19.07■□□□□ 0.64
GPNMB-213ENST00000492512 WASHC2AQ641Q2 1341 aa19.06■□□□□ 0.64
GPNMB-213ENST00000492512 TOMM70O94826 608 aa19.06■□□□□ 0.64
GPNMB-213ENST00000492512 PHKG2P15735 406 aa19.06■□□□□ 0.64
GPNMB-213ENST00000492512 TGFB2P61812 414 aa19.06■□□□□ 0.64
GPNMB-213ENST00000492512 EYA1Q99502 592 aa19.06■□□□□ 0.64
GPNMB-213ENST00000492512 CARD14Q9BXL6 1004 aa19.06■□□□□ 0.64
GPNMB-213ENST00000492512 RTCBQ9Y3I0 505 aaKnown RBP19.06■□□□□ 0.64
GPNMB-213ENST00000492512 TRAPPC3LQ5T215 181 aa19.05■□□□□ 0.64
GPNMB-213ENST00000492512 NLGN1Q8N2Q7 840 aa19.05■□□□□ 0.64
GPNMB-213ENST00000492512 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
GPNMB-213ENST00000492512 A0A0G2JLW4 131 aa19.04■□□□□ 0.64
GPNMB-213ENST00000492512 ARHGAP27Q6ZUM4 889 aa19.04■□□□□ 0.64
GPNMB-213ENST00000492512 CCDC87Q9NVE4 849 aa19.03■□□□□ 0.64
GPNMB-213ENST00000492512 C10orf71Q711Q0 1435 aa19.02■□□□□ 0.64
GPNMB-213ENST00000492512 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
GPNMB-213ENST00000492512 C4AP0C0L4 1744 aa19.01■□□□□ 0.63
GPNMB-213ENST00000492512 FCHSD2O94868 740 aa19.01■□□□□ 0.63
GPNMB-213ENST00000492512 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
GPNMB-213ENST00000492512 NMRK2Q9NPI5 230 aa19.01■□□□□ 0.63
GPNMB-213ENST00000492512 KDRP35968 1356 aa19.01■□□□□ 0.63
GPNMB-213ENST00000492512 BRCA1P38398 1863 aaKnown RBP19.01■□□□□ 0.63
GPNMB-213ENST00000492512 DPEP1P16444 411 aa19■□□□□ 0.63
GPNMB-213ENST00000492512 ADRA2BP18089 450 aa19■□□□□ 0.63
GPNMB-213ENST00000492512 RFC4P35249 363 aa19■□□□□ 0.63
GPNMB-213ENST00000492512 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
GPNMB-213ENST00000492512 PARP3Q9Y6F1 533 aa19■□□□□ 0.63
GPNMB-213ENST00000492512 ZNF831Q5JPB2 1677 aa19■□□□□ 0.63
GPNMB-213ENST00000492512 RC3H1Q5TC82 1133 aaKnown RBP18.99■□□□□ 0.63
GPNMB-213ENST00000492512 SLC4A9Q96Q91 983 aa18.99■□□□□ 0.63
GPNMB-213ENST00000492512 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
GPNMB-213ENST00000492512 COL5A3P25940 1745 aaPredicted RBP18.99■□□□□ 0.63
GPNMB-213ENST00000492512 ARFGEF1Q9Y6D6 1849 aa18.98■□□□□ 0.63
GPNMB-213ENST00000492512 WDR90Q96KV7 1748 aa18.98■□□□□ 0.63
GPNMB-213ENST00000492512 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
GPNMB-213ENST00000492512 GYS1P13807 737 aa18.98■□□□□ 0.63
GPNMB-213ENST00000492512 CNTNAP4Q9C0A0 1308 aa18.98■□□□□ 0.63
GPNMB-213ENST00000492512 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
GPNMB-213ENST00000492512 RPS6KA4O75676 772 aa18.97■□□□□ 0.63
GPNMB-213ENST00000492512 EIF4A2Q14240 407 aaKnown RBP18.97■□□□□ 0.63
GPNMB-213ENST00000492512 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
GPNMB-213ENST00000492512 MYH14Q7Z406 1995 aaKnown RBP18.97■□□□□ 0.63
GPNMB-213ENST00000492512 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
GPNMB-213ENST00000492512 C9orf131Q5VYM1 1079 aa18.96■□□□□ 0.63
GPNMB-213ENST00000492512 RBM46Q8TBY0 533 aaKnown RBP18.96■□□□□ 0.63
GPNMB-213ENST00000492512 DCAF5Q96JK2 942 aa18.95■□□□□ 0.62
GPNMB-213ENST00000492512 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
GPNMB-213ENST00000492512 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
GPNMB-213ENST00000492512 KCNA3P22001 575 aa18.93■□□□□ 0.62
GPNMB-213ENST00000492512 CABP4P57796 275 aa18.93■□□□□ 0.62
GPNMB-213ENST00000492512 PLEKHO1Q53GL0 409 aaPredicted RBP18.92■□□□□ 0.62
GPNMB-213ENST00000492512 DALRD3Q5D0E6 543 aaKnown RBP18.92■□□□□ 0.62
GPNMB-213ENST00000492512 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
GPNMB-213ENST00000492512 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
GPNMB-213ENST00000492512 FSTL1Q12841 308 aa18.91■□□□□ 0.62
GPNMB-213ENST00000492512 ZNF530Q6P9A1 599 aaPredicted RBP18.91■□□□□ 0.62
GPNMB-213ENST00000492512 KLRG1Q96E93 195 aa18.91■□□□□ 0.62
GPNMB-213ENST00000492512 KCPQ6ZWJ8 1503 aa18.9■□□□□ 0.62
GPNMB-213ENST00000492512 HTRA3P83110 453 aa18.9■□□□□ 0.62
GPNMB-213ENST00000492512 RNF181Q9P0P0 153 aa18.9■□□□□ 0.62
GPNMB-213ENST00000492512 KDM6AO15550 1401 aaPredicted RBP18.9■□□□□ 0.62
GPNMB-213ENST00000492512 SBF1O95248 1867 aa18.89■□□□□ 0.61
GPNMB-213ENST00000492512 CRKLP46109 303 aaKnown RBP18.89■□□□□ 0.61
GPNMB-213ENST00000492512 AMOTQ4VCS5 1084 aa18.89■□□□□ 0.61
GPNMB-213ENST00000492512 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
GPNMB-213ENST00000492512 PCNTO95613 3336 aa18.88■□□□□ 0.61
GPNMB-213ENST00000492512 MTHFSP49914 203 aa18.88■□□□□ 0.61
GPNMB-213ENST00000492512 FKBP8Q14318 412 aa18.88■□□□□ 0.61
GPNMB-213ENST00000492512 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
GPNMB-213ENST00000492512 TNRC6CQ9HCJ0 1690 aaKnown RBP18.88■□□□□ 0.61
GPNMB-213ENST00000492512 DDR1Q08345 913 aa18.87■□□□□ 0.61
GPNMB-213ENST00000492512 C1orf141Q5JVX7 400 aa18.87■□□□□ 0.61
GPNMB-213ENST00000492512 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
GPNMB-213ENST00000492512 RRAGCQ9HB90 399 aa18.87■□□□□ 0.61
GPNMB-213ENST00000492512 CHRNA5P30532 468 aa18.86■□□□□ 0.61
GPNMB-213ENST00000492512 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
GPNMB-213ENST00000492512 NFATC2IPQ8NCF5 419 aa18.86■□□□□ 0.61
GPNMB-213ENST00000492512 TJP1Q07157 1748 aa18.86■□□□□ 0.61
GPNMB-213ENST00000492512 COL13A1Q5TAT6 717 aaPredicted RBP18.85■□□□□ 0.61
GPNMB-213ENST00000492512 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
GPNMB-213ENST00000492512 ZPR1O75312 459 aa18.82■□□□□ 0.6
GPNMB-213ENST00000492512 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
GPNMB-213ENST00000492512 SMC1BQ8NDV3 1235 aa18.82■□□□□ 0.6
GPNMB-213ENST00000492512 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
GPNMB-213ENST00000492512 TM4SF1P30408 202 aa18.81■□□□□ 0.6
GPNMB-213ENST00000492512 INTS5Q6P9B9 1019 aaKnown RBP18.81■□□□□ 0.6
GPNMB-213ENST00000492512 ADAMTS7Q9UKP4 1686 aa18.8■□□□□ 0.6
GPNMB-213ENST00000492512 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
GPNMB-213ENST00000492512 CAPN15O75808 1086 aa18.8■□□□□ 0.6
GPNMB-213ENST00000492512 ZC3H4Q9UPT8 1303 aaKnown RBP18.79■□□□□ 0.6
GPNMB-213ENST00000492512 RASSF7Q02833 373 aa18.79■□□□□ 0.6
GPNMB-213ENST00000492512 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
GPNMB-213ENST00000492512 TNS4Q8IZW8 715 aa18.79■□□□□ 0.6
GPNMB-213ENST00000492512 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
GPNMB-213ENST00000492512 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
GPNMB-213ENST00000492512 LMNB1P20700 586 aa18.77■□□□□ 0.6
GPNMB-213ENST00000492512 DNAJC10Q8IXB1 793 aa18.77■□□□□ 0.6
GPNMB-213ENST00000492512 PANK3Q9H999 370 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms