RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 CD2APQ9Y5K6 639 aa19.92■□□□□ 0.78
SS18L1-205ENST00000492466 PHF14O94880 888 aa19.91■□□□□ 0.78
SS18L1-205ENST00000492466 SSFA2P28290 1259 aa19.91■□□□□ 0.78
SS18L1-205ENST00000492466 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
SS18L1-205ENST00000492466 ERVV-2B6SEH9 535 aa19.9■□□□□ 0.78
SS18L1-205ENST00000492466 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
SS18L1-205ENST00000492466 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
SS18L1-205ENST00000492466 AEBP1Q8IUX7 1158 aa19.9■□□□□ 0.78
SS18L1-205ENST00000492466 KDRP35968 1356 aa19.9■□□□□ 0.78
SS18L1-205ENST00000492466 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.77
SS18L1-205ENST00000492466 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
SS18L1-205ENST00000492466 DCAF5Q96JK2 942 aa19.88■□□□□ 0.77
SS18L1-205ENST00000492466 CEP350Q5VT06 3117 aa19.88■□□□□ 0.77
SS18L1-205ENST00000492466 GRIN3BO60391 1043 aa19.87■□□□□ 0.77
SS18L1-205ENST00000492466 IL13P35225 146 aa19.87■□□□□ 0.77
SS18L1-205ENST00000492466 PLEKHO1Q53GL0 409 aaPredicted RBP19.87■□□□□ 0.77
SS18L1-205ENST00000492466 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
SS18L1-205ENST00000492466 GNPATO15228 680 aa19.86■□□□□ 0.77
SS18L1-205ENST00000492466 AMOTQ4VCS5 1084 aa19.86■□□□□ 0.77
SS18L1-205ENST00000492466 HSP90AB1P08238 724 aaKnown RBP19.85■□□□□ 0.77
SS18L1-205ENST00000492466 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
SS18L1-205ENST00000492466 SULT6B1Q6IMI4 303 aa19.84■□□□□ 0.77
SS18L1-205ENST00000492466 PER1O15534 1290 aaPredicted RBP19.83■□□□□ 0.77
SS18L1-205ENST00000492466 COL5A3P25940 1745 aaPredicted RBP19.82■□□□□ 0.76
SS18L1-205ENST00000492466 C1QTNF8P60827 252 aa19.82■□□□□ 0.76
SS18L1-205ENST00000492466 RC3H1Q5TC82 1133 aaKnown RBP19.82■□□□□ 0.76
SS18L1-205ENST00000492466 MTHFSP49914 203 aa19.81■□□□□ 0.76
SS18L1-205ENST00000492466 CABP4P57796 275 aa19.81■□□□□ 0.76
SS18L1-205ENST00000492466 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
SS18L1-205ENST00000492466 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
SS18L1-205ENST00000492466 MYH14Q7Z406 1995 aaKnown RBP19.81■□□□□ 0.76
SS18L1-205ENST00000492466 NFATC2IPQ8NCF5 419 aa19.8■□□□□ 0.76
SS18L1-205ENST00000492466 CNTNAP4Q9C0A0 1308 aa19.79■□□□□ 0.76
SS18L1-205ENST00000492466 TRAPPC3LQ5T215 181 aa19.79■□□□□ 0.76
SS18L1-205ENST00000492466 ARHGEF1Q92888 912 aaKnown RBP19.79■□□□□ 0.76
SS18L1-205ENST00000492466 RTCBQ9Y3I0 505 aaKnown RBP19.79■□□□□ 0.76
SS18L1-205ENST00000492466 MMP10P09238 476 aa19.78■□□□□ 0.76
SS18L1-205ENST00000492466 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
SS18L1-205ENST00000492466 RPS6KA4O75676 772 aa19.77■□□□□ 0.76
SS18L1-205ENST00000492466 ADRA2BP18089 450 aa19.77■□□□□ 0.76
SS18L1-205ENST00000492466 SCN11AQ9UI33 1791 aa19.76■□□□□ 0.75
SS18L1-205ENST00000492466 PTCD1O75127 700 aaKnown RBP19.76■□□□□ 0.75
SS18L1-205ENST00000492466 GYS1P13807 737 aa19.76■□□□□ 0.75
SS18L1-205ENST00000492466 WWC3Q9ULE0 1092 aa19.76■□□□□ 0.75
SS18L1-205ENST00000492466 KIF13BQ9NQT8 1826 aa19.76■□□□□ 0.75
SS18L1-205ENST00000492466 KIAA1551Q9HCM1 1747 aa19.76■□□□□ 0.75
SS18L1-205ENST00000492466 ADCY9O60503 1353 aa19.75■□□□□ 0.75
SS18L1-205ENST00000492466 NLGN1Q8N2Q7 840 aa19.75■□□□□ 0.75
SS18L1-205ENST00000492466 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
SS18L1-205ENST00000492466 AKAP4Q5JQC9 854 aa19.74■□□□□ 0.75
SS18L1-205ENST00000492466 LGR6Q9HBX8 967 aa19.74■□□□□ 0.75
SS18L1-205ENST00000492466 ATP10DQ9P241 1426 aa19.74■□□□□ 0.75
SS18L1-205ENST00000492466 TJP1Q07157 1748 aa19.73■□□□□ 0.75
SS18L1-205ENST00000492466 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
SS18L1-205ENST00000492466 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
SS18L1-205ENST00000492466 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
SS18L1-205ENST00000492466 HMOX1P09601 288 aa19.72■□□□□ 0.75
SS18L1-205ENST00000492466 CRKLP46109 303 aaKnown RBP19.72■□□□□ 0.75
SS18L1-205ENST00000492466 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
SS18L1-205ENST00000492466 C10orf71Q711Q0 1435 aa19.71■□□□□ 0.75
SS18L1-205ENST00000492466 RFC4P35249 363 aa19.71■□□□□ 0.75
SS18L1-205ENST00000492466 INTS5Q6P9B9 1019 aaKnown RBP19.71■□□□□ 0.75
SS18L1-205ENST00000492466 CFAP53Q96M91 514 aa19.71■□□□□ 0.75
SS18L1-205ENST00000492466 SLC52A2Q9HAB3 445 aa19.71■□□□□ 0.75
SS18L1-205ENST00000492466 SENP3-EIF4A1A0A087X0R7 540 aa19.7■□□□□ 0.74
SS18L1-205ENST00000492466 TGFB2P61812 414 aa19.7■□□□□ 0.74
SS18L1-205ENST00000492466 MTHFSDQ2M296 383 aaKnown RBP19.7■□□□□ 0.74
SS18L1-205ENST00000492466 MRC1P22897 1456 aa19.7■□□□□ 0.74
SS18L1-205ENST00000492466 ADAMTS7Q9UKP4 1686 aa19.7■□□□□ 0.74
SS18L1-205ENST00000492466 RNMTO43148 476 aaKnown RBP19.69■□□□□ 0.74
SS18L1-205ENST00000492466 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
SS18L1-205ENST00000492466 N4BP2Q86UW6 1770 aaPredicted RBP19.69■□□□□ 0.74
SS18L1-205ENST00000492466 COL3A1P02461 1466 aaPredicted RBP19.68■□□□□ 0.74
SS18L1-205ENST00000492466 A0A0G2JLW4 131 aa19.68■□□□□ 0.74
SS18L1-205ENST00000492466 DIAPH1O60610 1272 aaKnown RBP19.68■□□□□ 0.74
SS18L1-205ENST00000492466 KCNA3P22001 575 aa19.67■□□□□ 0.74
SS18L1-205ENST00000492466 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
SS18L1-205ENST00000492466 FKBP8Q14318 412 aa19.67■□□□□ 0.74
SS18L1-205ENST00000492466 DNAJC10Q8IXB1 793 aa19.67■□□□□ 0.74
SS18L1-205ENST00000492466 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
SS18L1-205ENST00000492466 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
SS18L1-205ENST00000492466 U2SURPO15042 1029 aaKnown RBP19.66■□□□□ 0.74
SS18L1-205ENST00000492466 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
SS18L1-205ENST00000492466 CYP19A1P11511 503 aaPredicted RBP19.65■□□□□ 0.74
SS18L1-205ENST00000492466 DPEP1P16444 411 aa19.65■□□□□ 0.74
SS18L1-205ENST00000492466 DDR1Q08345 913 aa19.65■□□□□ 0.74
SS18L1-205ENST00000492466 CCDC87Q9NVE4 849 aa19.65■□□□□ 0.74
SS18L1-205ENST00000492466 PARP3Q9Y6F1 533 aa19.65■□□□□ 0.74
SS18L1-205ENST00000492466 BRCA1P38398 1863 aaKnown RBP19.65■□□□□ 0.74
SS18L1-205ENST00000492466 TM4SF1P30408 202 aa19.64■□□□□ 0.73
SS18L1-205ENST00000492466 GPBP1L1Q9HC44 474 aaPredicted RBP19.64■□□□□ 0.73
SS18L1-205ENST00000492466 SOS1Q07889 1333 aaPredicted RBP19.63■□□□□ 0.73
SS18L1-205ENST00000492466 PPP2R1AP30153 589 aa19.63■□□□□ 0.73
SS18L1-205ENST00000492466 ZNF526Q8TF50 670 aaPredicted RBP19.62■□□□□ 0.73
SS18L1-205ENST00000492466 BCS1LQ9Y276 419 aa19.62■□□□□ 0.73
SS18L1-205ENST00000492466 NUDCQ9Y266 331 aa19.61■□□□□ 0.73
SS18L1-205ENST00000492466 UBR2Q8IWV8 1755 aa19.6■□□□□ 0.73
SS18L1-205ENST00000492466 POLRMTO00411 1230 aaKnown RBP19.6■□□□□ 0.73
SS18L1-205ENST00000492466 USPL1Q5W0Q7 1092 aa19.6■□□□□ 0.73
SS18L1-205ENST00000492466 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms