RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
COPS7B-222ENST00000492423 THRAP3Q9Y2W1 955 aaKnown RBP19.35■□□□□ 0.69
COPS7B-222ENST00000492423 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
COPS7B-222ENST00000492423 PAPPAQ13219 1627 aa19.35■□□□□ 0.69
COPS7B-222ENST00000492423 AFF2P51816 1311 aa19.34■□□□□ 0.69
COPS7B-222ENST00000492423 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
COPS7B-222ENST00000492423 USP21Q9UK80 565 aa19.34■□□□□ 0.69
COPS7B-222ENST00000492423 DOT1LQ8TEK3 1739 aa19.34■□□□□ 0.69
COPS7B-222ENST00000492423 ATRNO75882 1429 aa19.34■□□□□ 0.69
COPS7B-222ENST00000492423 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
COPS7B-222ENST00000492423 BARGINQ6ZT62 677 aa19.33■□□□□ 0.68
COPS7B-222ENST00000492423 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.68
COPS7B-222ENST00000492423 CDCA7Q9BWT1 371 aaPredicted RBP19.31■□□□□ 0.68
COPS7B-222ENST00000492423 UBR2Q8IWV8 1755 aa19.3■□□□□ 0.68
COPS7B-222ENST00000492423 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
COPS7B-222ENST00000492423 NKX1-1Q15270 411 aaPredicted RBP19.3■□□□□ 0.68
COPS7B-222ENST00000492423 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
COPS7B-222ENST00000492423 CCDC9Q9Y3X0 531 aaKnown RBP19.3■□□□□ 0.68
COPS7B-222ENST00000492423 CT47B1P0C2W7 299 aaPredicted RBP19.29■□□□□ 0.68
COPS7B-222ENST00000492423 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
COPS7B-222ENST00000492423 BABAM1Q9NWV8 329 aa19.29■□□□□ 0.68
COPS7B-222ENST00000492423 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
COPS7B-222ENST00000492423 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
COPS7B-222ENST00000492423 C5P01031 1676 aa19.28■□□□□ 0.68
COPS7B-222ENST00000492423 POTEAQ6S8J7 498 aa19.28■□□□□ 0.68
COPS7B-222ENST00000492423 TEFQ10587 303 aa19.27■□□□□ 0.68
COPS7B-222ENST00000492423 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
COPS7B-222ENST00000492423 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
COPS7B-222ENST00000492423 DDX54Q8TDD1 881 aaKnown RBP19.26■□□□□ 0.67
COPS7B-222ENST00000492423 SLC52A2Q9HAB3 445 aa19.26■□□□□ 0.67
COPS7B-222ENST00000492423 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
COPS7B-222ENST00000492423 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
COPS7B-222ENST00000492423 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
COPS7B-222ENST00000492423 CACNA1FO60840 1977 aa19.24■□□□□ 0.67
COPS7B-222ENST00000492423 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
COPS7B-222ENST00000492423 BRWD3Q6RI45 1802 aa19.24■□□□□ 0.67
COPS7B-222ENST00000492423 EXOC5O00471 708 aa19.24■□□□□ 0.67
COPS7B-222ENST00000492423 VAMP4O75379 141 aa19.24■□□□□ 0.67
COPS7B-222ENST00000492423 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
COPS7B-222ENST00000492423 KCNQ3O43525 872 aa19.23■□□□□ 0.67
COPS7B-222ENST00000492423 DDB1Q16531 1140 aa19.23■□□□□ 0.67
COPS7B-222ENST00000492423 TWISTNBQ3B726 338 aaPredicted RBP19.23■□□□□ 0.67
COPS7B-222ENST00000492423 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
COPS7B-222ENST00000492423 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
COPS7B-222ENST00000492423 BCAR3O75815 825 aa19.22■□□□□ 0.67
COPS7B-222ENST00000492423 GJD4Q96KN9 370 aaPredicted RBP19.22■□□□□ 0.67
COPS7B-222ENST00000492423 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
COPS7B-222ENST00000492423 SBF2Q86WG5 1849 aa19.21■□□□□ 0.67
COPS7B-222ENST00000492423 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
COPS7B-222ENST00000492423 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
COPS7B-222ENST00000492423 ELL2O00472 640 aaPredicted RBP19.2■□□□□ 0.66
COPS7B-222ENST00000492423 CABP4P57796 275 aa19.2■□□□□ 0.66
COPS7B-222ENST00000492423 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
COPS7B-222ENST00000492423 MARCH10Q8NA82 808 aaPredicted RBP19.2■□□□□ 0.66
COPS7B-222ENST00000492423 NFATC2IPQ8NCF5 419 aa19.2■□□□□ 0.66
COPS7B-222ENST00000492423 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
COPS7B-222ENST00000492423 ZNF772Q68DY9 489 aaPredicted RBP19.19■□□□□ 0.66
COPS7B-222ENST00000492423 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
COPS7B-222ENST00000492423 ZNF428Q96B54 188 aa19.19■□□□□ 0.66
COPS7B-222ENST00000492423 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
COPS7B-222ENST00000492423 GTF3C3Q9Y5Q9 886 aa19.19■□□□□ 0.66
COPS7B-222ENST00000492423 NHSQ6T4R5 1651 aa19.18■□□□□ 0.66
COPS7B-222ENST00000492423 MYCNP04198 464 aaPredicted RBP19.18■□□□□ 0.66
COPS7B-222ENST00000492423 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
COPS7B-222ENST00000492423 BCL2L13Q9BXK5 485 aa19.18■□□□□ 0.66
COPS7B-222ENST00000492423 PLIN1O60240 522 aa19.17■□□□□ 0.66
COPS7B-222ENST00000492423 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
COPS7B-222ENST00000492423 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
COPS7B-222ENST00000492423 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
COPS7B-222ENST00000492423 ONECUT3O60422 494 aaPredicted RBP19.16■□□□□ 0.66
COPS7B-222ENST00000492423 NEFLP07196 543 aa19.16■□□□□ 0.66
COPS7B-222ENST00000492423 SLC39A6Q13433 755 aa19.16■□□□□ 0.66
COPS7B-222ENST00000492423 ZNF790Q6PG37 636 aa19.16■□□□□ 0.66
COPS7B-222ENST00000492423 SMC4Q9NTJ3 1288 aa19.16■□□□□ 0.66
COPS7B-222ENST00000492423 BCL9O00512 1426 aa19.16■□□□□ 0.66
COPS7B-222ENST00000492423 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
COPS7B-222ENST00000492423 FKBP8Q14318 412 aa19.14■□□□□ 0.65
COPS7B-222ENST00000492423 MRPL50Q8N5N7 158 aaKnown RBP19.14■□□□□ 0.65
COPS7B-222ENST00000492423 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.65
COPS7B-222ENST00000492423 TJP1Q07157 1748 aa19.14■□□□□ 0.65
COPS7B-222ENST00000492423 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.65
COPS7B-222ENST00000492423 BTAF1O14981 1849 aa19.14■□□□□ 0.65
COPS7B-222ENST00000492423 HOXB7P09629 217 aa19.13■□□□□ 0.65
COPS7B-222ENST00000492423 TMOD3Q9NYL9 352 aa19.13■□□□□ 0.65
COPS7B-222ENST00000492423 A0A0G2JS52 829 aa19.12■□□□□ 0.65
COPS7B-222ENST00000492423 TCERG1O14776 1098 aaKnown RBP19.12■□□□□ 0.65
COPS7B-222ENST00000492423 MYT1Q01538 1121 aa19.12■□□□□ 0.65
COPS7B-222ENST00000492423 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.12■□□□□ 0.65
COPS7B-222ENST00000492423 KIF16BQ96L93 1317 aa19.11■□□□□ 0.65
COPS7B-222ENST00000492423 GIGYF1O75420 1035 aaPredicted RBP19.11■□□□□ 0.65
COPS7B-222ENST00000492423 C20orf194Q5TEA3 1177 aa19.11■□□□□ 0.65
COPS7B-222ENST00000492423 PIGBQ92521 554 aa19.11■□□□□ 0.65
COPS7B-222ENST00000492423 ZNF496Q96IT1 587 aaPredicted RBP19.11■□□□□ 0.65
COPS7B-222ENST00000492423 TNNQ9UQP3 1299 aa19.11■□□□□ 0.65
COPS7B-222ENST00000492423 POLA2Q14181 598 aa19.1■□□□□ 0.65
COPS7B-222ENST00000492423 SEPT12Q8IYM1 358 aa19.1■□□□□ 0.65
COPS7B-222ENST00000492423 TTC5Q8N0Z6 440 aa19.1■□□□□ 0.65
COPS7B-222ENST00000492423 PRAMEF22A3QJZ6 481 aa19.09■□□□□ 0.65
COPS7B-222ENST00000492423 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
COPS7B-222ENST00000492423 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms