RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
CDK11A-220ENST00000492390 C9orf131Q5VYM1 1079 aa21.96■■□□□ 1.11
CDK11A-220ENST00000492390 C10orf71Q711Q0 1435 aa21.96■■□□□ 1.11
CDK11A-220ENST00000492390 ITPK1Q13572 414 aa21.95■■□□□ 1.1
CDK11A-220ENST00000492390 N4BP2Q86UW6 1770 aaPredicted RBP21.94■■□□□ 1.1
CDK11A-220ENST00000492390 DPEP1P16444 411 aa21.94■■□□□ 1.1
CDK11A-220ENST00000492390 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
CDK11A-220ENST00000492390 TMF1P82094 1093 aa21.94■■□□□ 1.1
CDK11A-220ENST00000492390 CCDC87Q9NVE4 849 aa21.94■■□□□ 1.1
CDK11A-220ENST00000492390 KDM2BQ8NHM5 1336 aa21.94■■□□□ 1.1
CDK11A-220ENST00000492390 KIF24Q5T7B8 1368 aa21.94■■□□□ 1.1
CDK11A-220ENST00000492390 FYB1O15117 783 aa21.93■■□□□ 1.1
CDK11A-220ENST00000492390 FLT4P35916 1363 aa21.92■■□□□ 1.1
CDK11A-220ENST00000492390 TRAPPC3LQ5T215 181 aa21.92■■□□□ 1.1
CDK11A-220ENST00000492390 GGNBP2Q9H3C7 697 aa21.92■■□□□ 1.1
CDK11A-220ENST00000492390 TMOD3Q9NYL9 352 aa21.92■■□□□ 1.1
CDK11A-220ENST00000492390 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
CDK11A-220ENST00000492390 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
CDK11A-220ENST00000492390 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
CDK11A-220ENST00000492390 RTCBQ9Y3I0 505 aaKnown RBP21.91■■□□□ 1.1
CDK11A-220ENST00000492390 PKD1L3Q7Z443 1732 aa21.91■■□□□ 1.1
CDK11A-220ENST00000492390 TESK2Q96S53 571 aa21.89■■□□□ 1.09
CDK11A-220ENST00000492390 ADRA2BP18089 450 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 KCNA3P22001 575 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 RRAGCQ9HB90 399 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.88■■□□□ 1.09
CDK11A-220ENST00000492390 PIM2Q9P1W9 311 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 PARP3Q9Y6F1 533 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 KCPQ6ZWJ8 1503 aa21.88■■□□□ 1.09
CDK11A-220ENST00000492390 BRCA1P38398 1863 aaKnown RBP21.87■■□□□ 1.09
CDK11A-220ENST00000492390 ARFGEF1Q9Y6D6 1849 aa21.86■■□□□ 1.09
CDK11A-220ENST00000492390 ARHGEF1Q92888 912 aaKnown RBP21.86■■□□□ 1.09
CDK11A-220ENST00000492390 DCAF5Q96JK2 942 aa21.86■■□□□ 1.09
CDK11A-220ENST00000492390 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
CDK11A-220ENST00000492390 RNF181Q9P0P0 153 aa21.86■■□□□ 1.09
CDK11A-220ENST00000492390 NCAPD2Q15021 1401 aa21.86■■□□□ 1.09
CDK11A-220ENST00000492390 C4AP0C0L4 1744 aa21.86■■□□□ 1.09
CDK11A-220ENST00000492390 GYS1P13807 737 aa21.85■■□□□ 1.09
CDK11A-220ENST00000492390 RC3H1Q5TC82 1133 aaKnown RBP21.85■■□□□ 1.09
CDK11A-220ENST00000492390 DALRD3Q5D0E6 543 aaKnown RBP21.84■■□□□ 1.09
CDK11A-220ENST00000492390 HSPA1AP0DMV8 641 aaKnown RBP21.83■■□□□ 1.09
CDK11A-220ENST00000492390 HSPA1BP0DMV9 641 aaKnown RBP21.83■■□□□ 1.09
CDK11A-220ENST00000492390 RFC4P35249 363 aa21.83■■□□□ 1.09
CDK11A-220ENST00000492390 IFNL2Q8IZJ0 200 aa21.83■■□□□ 1.09
CDK11A-220ENST00000492390 KDRP35968 1356 aa21.83■■□□□ 1.08
CDK11A-220ENST00000492390 TNRC6CQ9HCJ0 1690 aaKnown RBP21.82■■□□□ 1.08
CDK11A-220ENST00000492390 ST20-MTHFSA0A0A6YYL1 179 aa21.82■■□□□ 1.08
CDK11A-220ENST00000492390 PHKG2P15735 406 aa21.82■■□□□ 1.08
CDK11A-220ENST00000492390 TONSLQ96HA7 1378 aa21.82■■□□□ 1.08
CDK11A-220ENST00000492390 RPS6KA4O75676 772 aa21.81■■□□□ 1.08
CDK11A-220ENST00000492390 PCNTO95613 3336 aa21.81■■□□□ 1.08
CDK11A-220ENST00000492390 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
CDK11A-220ENST00000492390 SLC4A9Q96Q91 983 aa21.8■■□□□ 1.08
CDK11A-220ENST00000492390 ZC3H4Q9UPT8 1303 aaKnown RBP21.8■■□□□ 1.08
CDK11A-220ENST00000492390 EMILIN1Q9Y6C2 1016 aa21.79■■□□□ 1.08
CDK11A-220ENST00000492390 ZNF831Q5JPB2 1677 aa21.79■■□□□ 1.08
CDK11A-220ENST00000492390 RBM42Q9BTD8 480 aaKnown RBP21.77■■□□□ 1.08
CDK11A-220ENST00000492390 VEGFAP15692 232 aaPredicted RBP21.76■■□□□ 1.07
CDK11A-220ENST00000492390 EYA1Q99502 592 aa21.76■■□□□ 1.07
CDK11A-220ENST00000492390 ERVV-2B6SEH9 535 aa21.75■■□□□ 1.07
CDK11A-220ENST00000492390 WASHC2AQ641Q2 1341 aa21.75■■□□□ 1.07
CDK11A-220ENST00000492390 SBF1O95248 1867 aa21.75■■□□□ 1.07
CDK11A-220ENST00000492390 KIF20BQ96Q89 1820 aa21.73■■□□□ 1.07
CDK11A-220ENST00000492390 GLTPD2A6NH11 291 aa21.73■■□□□ 1.07
CDK11A-220ENST00000492390 PPM1GO15355 546 aaPredicted RBP21.73■■□□□ 1.07
CDK11A-220ENST00000492390 COL5A3P25940 1745 aaPredicted RBP21.72■■□□□ 1.07
CDK11A-220ENST00000492390 CHRNA5P30532 468 aa21.72■■□□□ 1.07
CDK11A-220ENST00000492390 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
CDK11A-220ENST00000492390 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
CDK11A-220ENST00000492390 DDR1Q08345 913 aa21.71■■□□□ 1.07
CDK11A-220ENST00000492390 FKBP8Q14318 412 aa21.71■■□□□ 1.07
CDK11A-220ENST00000492390 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
CDK11A-220ENST00000492390 LMNB1P20700 586 aa21.7■■□□□ 1.06
CDK11A-220ENST00000492390 USP42Q9H9J4 1324 aaKnown RBP21.7■■□□□ 1.06
CDK11A-220ENST00000492390 SRP68Q9UHB9 627 aaKnown RBP21.69■■□□□ 1.06
CDK11A-220ENST00000492390 MYH14Q7Z406 1995 aaKnown RBP21.68■■□□□ 1.06
CDK11A-220ENST00000492390 RASSF7Q02833 373 aa21.68■■□□□ 1.06
CDK11A-220ENST00000492390 ANKRD26Q9UPS8 1709 aa21.67■■□□□ 1.06
CDK11A-220ENST00000492390 POLRMTO00411 1230 aaKnown RBP21.67■■□□□ 1.06
CDK11A-220ENST00000492390 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
CDK11A-220ENST00000492390 SLC34A2O95436 690 aa21.66■■□□□ 1.06
CDK11A-220ENST00000492390 TM4SF1P30408 202 aa21.66■■□□□ 1.06
CDK11A-220ENST00000492390 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
CDK11A-220ENST00000492390 CARD14Q9BXL6 1004 aa21.66■■□□□ 1.06
CDK11A-220ENST00000492390 CABP4P57796 275 aa21.65■■□□□ 1.06
CDK11A-220ENST00000492390 PTCD1O75127 700 aaKnown RBP21.63■■□□□ 1.05
CDK11A-220ENST00000492390 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
CDK11A-220ENST00000492390 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
CDK11A-220ENST00000492390 POTECB2RU33 542 aa21.62■■□□□ 1.05
CDK11A-220ENST00000492390 DPY19L2Q6NUT2 758 aa21.62■■□□□ 1.05
CDK11A-220ENST00000492390 CREBZFQ9NS37 354 aa21.62■■□□□ 1.05
CDK11A-220ENST00000492390 EIF4A2Q14240 407 aaKnown RBP21.61■■□□□ 1.05
CDK11A-220ENST00000492390 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
CDK11A-220ENST00000492390 PRDM10Q9NQV6 1147 aa21.61■■□□□ 1.05
CDK11A-220ENST00000492390 ZPR1O75312 459 aa21.6■■□□□ 1.05
CDK11A-220ENST00000492390 TTLL6Q8N841 843 aa21.6■■□□□ 1.05
CDK11A-220ENST00000492390 AMOTQ4VCS5 1084 aa21.59■■□□□ 1.05
CDK11A-220ENST00000492390 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
CDK11A-220ENST00000492390 USPL1Q5W0Q7 1092 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms