RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 ZNF831Q5JPB2 1677 aa23.39■■□□□ 1.34
PSMD4-212ENST00000491857 HSPA6P17066 643 aa23.38■■□□□ 1.33
PSMD4-212ENST00000491857 IFFO2Q5TF58 517 aa23.38■■□□□ 1.33
PSMD4-212ENST00000491857 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
PSMD4-212ENST00000491857 MMP10P09238 476 aa23.37■■□□□ 1.33
PSMD4-212ENST00000491857 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
PSMD4-212ENST00000491857 TIMELESSQ9UNS1 1208 aa23.36■■□□□ 1.33
PSMD4-212ENST00000491857 RTCBQ9Y3I0 505 aaKnown RBP23.36■■□□□ 1.33
PSMD4-212ENST00000491857 KDRP35968 1356 aa23.36■■□□□ 1.33
PSMD4-212ENST00000491857 HSP90AB1P08238 724 aaKnown RBP23.35■■□□□ 1.33
PSMD4-212ENST00000491857 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
PSMD4-212ENST00000491857 NLGN1Q8N2Q7 840 aa23.35■■□□□ 1.33
PSMD4-212ENST00000491857 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
PSMD4-212ENST00000491857 COL5A3P25940 1745 aaPredicted RBP23.34■■□□□ 1.33
PSMD4-212ENST00000491857 KIAA1551Q9HCM1 1747 aa23.34■■□□□ 1.33
PSMD4-212ENST00000491857 ERVV-2B6SEH9 535 aa23.34■■□□□ 1.33
PSMD4-212ENST00000491857 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
PSMD4-212ENST00000491857 ADRA2BP18089 450 aa23.33■■□□□ 1.33
PSMD4-212ENST00000491857 TGFB2P61812 414 aa23.33■■□□□ 1.33
PSMD4-212ENST00000491857 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
PSMD4-212ENST00000491857 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
PSMD4-212ENST00000491857 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
PSMD4-212ENST00000491857 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
PSMD4-212ENST00000491857 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
PSMD4-212ENST00000491857 RC3H1Q5TC82 1133 aaKnown RBP23.31■■□□□ 1.32
PSMD4-212ENST00000491857 POLR3GLQ9BT43 218 aa23.31■■□□□ 1.32
PSMD4-212ENST00000491857 C10orf71Q711Q0 1435 aa23.31■■□□□ 1.32
PSMD4-212ENST00000491857 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
PSMD4-212ENST00000491857 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
PSMD4-212ENST00000491857 CCDC87Q9NVE4 849 aa23.3■■□□□ 1.32
PSMD4-212ENST00000491857 KIF3CO14782 793 aa23.29■■□□□ 1.32
PSMD4-212ENST00000491857 RFC4P35249 363 aa23.28■■□□□ 1.32
PSMD4-212ENST00000491857 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
PSMD4-212ENST00000491857 ARHGEF1Q92888 912 aaKnown RBP23.28■■□□□ 1.32
PSMD4-212ENST00000491857 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
PSMD4-212ENST00000491857 BCS1LQ9Y276 419 aa23.28■■□□□ 1.32
PSMD4-212ENST00000491857 BRCA1P38398 1863 aaKnown RBP23.28■■□□□ 1.32
PSMD4-212ENST00000491857 RPS6KA4O75676 772 aa23.27■■□□□ 1.32
PSMD4-212ENST00000491857 A0A0G2JLW4 131 aa23.26■■□□□ 1.31
PSMD4-212ENST00000491857 CABP4P57796 275 aa23.26■■□□□ 1.31
PSMD4-212ENST00000491857 ZNF530Q6P9A1 599 aaPredicted RBP23.26■■□□□ 1.31
PSMD4-212ENST00000491857 PARP3Q9Y6F1 533 aa23.26■■□□□ 1.31
PSMD4-212ENST00000491857 MYH14Q7Z406 1995 aaKnown RBP23.26■■□□□ 1.31
PSMD4-212ENST00000491857 KDM6AO15550 1401 aaPredicted RBP23.25■■□□□ 1.31
PSMD4-212ENST00000491857 GYS1P13807 737 aa23.25■■□□□ 1.31
PSMD4-212ENST00000491857 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
PSMD4-212ENST00000491857 C1orf141Q5JVX7 400 aa23.23■■□□□ 1.31
PSMD4-212ENST00000491857 ARHGAP27Q6ZUM4 889 aa23.23■■□□□ 1.31
PSMD4-212ENST00000491857 TOMM70O94826 608 aa23.22■■□□□ 1.31
PSMD4-212ENST00000491857 FCHSD2O94868 740 aa23.22■■□□□ 1.31
PSMD4-212ENST00000491857 DPEP1P16444 411 aa23.22■■□□□ 1.31
PSMD4-212ENST00000491857 MTHFSP49914 203 aa23.22■■□□□ 1.31
PSMD4-212ENST00000491857 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
PSMD4-212ENST00000491857 APLP1P51693 650 aa23.21■■□□□ 1.31
PSMD4-212ENST00000491857 PANK3Q9H999 370 aa23.2■■□□□ 1.3
PSMD4-212ENST00000491857 PTCD1O75127 700 aaKnown RBP23.19■■□□□ 1.3
PSMD4-212ENST00000491857 TJP1Q07157 1748 aa23.19■■□□□ 1.3
PSMD4-212ENST00000491857 CRKLP46109 303 aaKnown RBP23.18■■□□□ 1.3
PSMD4-212ENST00000491857 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
PSMD4-212ENST00000491857 SCN11AQ9UI33 1791 aa23.18■■□□□ 1.3
PSMD4-212ENST00000491857 NFATC2IPQ8NCF5 419 aa23.17■■□□□ 1.3
PSMD4-212ENST00000491857 PIM2Q9P1W9 311 aa23.17■■□□□ 1.3
PSMD4-212ENST00000491857 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
PSMD4-212ENST00000491857 MORC1Q86VD1 984 aa23.16■■□□□ 1.3
PSMD4-212ENST00000491857 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
PSMD4-212ENST00000491857 KCNA3P22001 575 aa23.14■■□□□ 1.29
PSMD4-212ENST00000491857 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
PSMD4-212ENST00000491857 SULT6B1Q6IMI4 303 aa23.14■■□□□ 1.29
PSMD4-212ENST00000491857 NMRK2Q9NPI5 230 aa23.14■■□□□ 1.29
PSMD4-212ENST00000491857 FKBP8Q14318 412 aa23.13■■□□□ 1.29
PSMD4-212ENST00000491857 C9orf131Q5VYM1 1079 aa23.13■■□□□ 1.29
PSMD4-212ENST00000491857 SRP68Q9UHB9 627 aaKnown RBP23.13■■□□□ 1.29
PSMD4-212ENST00000491857 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
PSMD4-212ENST00000491857 C16orf71Q8IYS4 520 aaPredicted RBP23.12■■□□□ 1.29
PSMD4-212ENST00000491857 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
PSMD4-212ENST00000491857 DDR1Q08345 913 aa23.11■■□□□ 1.29
PSMD4-212ENST00000491857 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
PSMD4-212ENST00000491857 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
PSMD4-212ENST00000491857 VIRMAQ69YN4 1812 aaKnown RBP23.1■■□□□ 1.29
PSMD4-212ENST00000491857 ADAMTS7Q9UKP4 1686 aa23.1■■□□□ 1.29
PSMD4-212ENST00000491857 KNSTRNQ9Y448 316 aa23.1■■□□□ 1.29
PSMD4-212ENST00000491857 ZPR1O75312 459 aa23.09■■□□□ 1.29
PSMD4-212ENST00000491857 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
PSMD4-212ENST00000491857 SBF1O95248 1867 aa23.09■■□□□ 1.29
PSMD4-212ENST00000491857 IL13P35225 146 aa23.08■■□□□ 1.29
PSMD4-212ENST00000491857 INTS5Q6P9B9 1019 aaKnown RBP23.08■■□□□ 1.29
PSMD4-212ENST00000491857 RNF181Q9P0P0 153 aa23.08■■□□□ 1.29
PSMD4-212ENST00000491857 TNRC6CQ9HCJ0 1690 aaKnown RBP23.08■■□□□ 1.29
PSMD4-212ENST00000491857 POLRMTO00411 1230 aaKnown RBP23.07■■□□□ 1.28
PSMD4-212ENST00000491857 DNAJC5GQ8N7S2 189 aa23.07■■□□□ 1.28
PSMD4-212ENST00000491857 KCPQ6ZWJ8 1503 aa23.07■■□□□ 1.28
PSMD4-212ENST00000491857 TM4SF1P30408 202 aa23.06■■□□□ 1.28
PSMD4-212ENST00000491857 CHRNA5P30532 468 aa23.06■■□□□ 1.28
PSMD4-212ENST00000491857 PCGF6Q9BYE7 350 aa23.06■■□□□ 1.28
PSMD4-212ENST00000491857 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
PSMD4-212ENST00000491857 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
PSMD4-212ENST00000491857 MRC1P22897 1456 aa23.05■■□□□ 1.28
PSMD4-212ENST00000491857 FSTL1Q12841 308 aa23.05■■□□□ 1.28
PSMD4-212ENST00000491857 USPL1Q5W0Q7 1092 aa23.05■■□□□ 1.28
PSMD4-212ENST00000491857 DNAJC10Q8IXB1 793 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms