RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
GABRE-211ENST00000491339 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
GABRE-211ENST00000491339 POLD1P28340 1107 aa11.7□□□□□ -0.54
GABRE-211ENST00000491339 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
GABRE-211ENST00000491339 PIGBQ92521 554 aa11.7□□□□□ -0.54
GABRE-211ENST00000491339 AK7Q96M32 723 aa11.7□□□□□ -0.54
GABRE-211ENST00000491339 ERVV-2B6SEH9 535 aa11.69□□□□□ -0.54
GABRE-211ENST00000491339 CICQ96RK0 1608 aaPredicted RBP11.69□□□□□ -0.54
GABRE-211ENST00000491339 PTGER2P43116 358 aa11.69□□□□□ -0.54
GABRE-211ENST00000491339 FLAD1Q8NFF5 587 aa11.69□□□□□ -0.54
GABRE-211ENST00000491339 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
GABRE-211ENST00000491339 LOC102724428A0A0B4J2F2 783 aa11.67□□□□□ -0.54
GABRE-211ENST00000491339 SIK1P57059 783 aa11.67□□□□□ -0.54
GABRE-211ENST00000491339 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
GABRE-211ENST00000491339 MRC1P22897 1456 aa11.67□□□□□ -0.54
GABRE-211ENST00000491339 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
GABRE-211ENST00000491339 CABP4P57796 275 aa11.67□□□□□ -0.54
GABRE-211ENST00000491339 ARXQ96QS3 562 aa11.67□□□□□ -0.54
GABRE-211ENST00000491339 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
GABRE-211ENST00000491339 HMOX1P09601 288 aa11.66□□□□□ -0.54
GABRE-211ENST00000491339 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
GABRE-211ENST00000491339 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
GABRE-211ENST00000491339 TJP1Q07157 1748 aa11.66□□□□□ -0.54
GABRE-211ENST00000491339 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
GABRE-211ENST00000491339 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
GABRE-211ENST00000491339 ATP6V1AP38606 617 aa11.65□□□□□ -0.54
GABRE-211ENST00000491339 FHDC1Q9C0D6 1143 aaPredicted RBP11.65□□□□□ -0.54
GABRE-211ENST00000491339 ASAP1Q9ULH1 1129 aa11.65□□□□□ -0.54
GABRE-211ENST00000491339 C4AP0C0L4 1744 aa11.65□□□□□ -0.54
GABRE-211ENST00000491339 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
GABRE-211ENST00000491339 ATG3Q9NT62 314 aa11.64□□□□□ -0.55
GABRE-211ENST00000491339 CHD4Q14839 1912 aa11.64□□□□□ -0.55
GABRE-211ENST00000491339 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
GABRE-211ENST00000491339 SSFA2P28290 1259 aa11.64□□□□□ -0.55
GABRE-211ENST00000491339 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
GABRE-211ENST00000491339 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
GABRE-211ENST00000491339 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
GABRE-211ENST00000491339 SIPA1L3O60292 1781 aaPredicted RBP11.63□□□□□ -0.55
GABRE-211ENST00000491339 PHF14O94880 888 aa11.63□□□□□ -0.55
GABRE-211ENST00000491339 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
GABRE-211ENST00000491339 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
GABRE-211ENST00000491339 GNPATO15228 680 aa11.63□□□□□ -0.55
GABRE-211ENST00000491339 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
GABRE-211ENST00000491339 SYT17Q9BSW7 474 aa11.62□□□□□ -0.55
GABRE-211ENST00000491339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
GABRE-211ENST00000491339 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
GABRE-211ENST00000491339 PPP2R1AP30153 589 aa11.61□□□□□ -0.55
GABRE-211ENST00000491339 ITPK1Q13572 414 aa11.61□□□□□ -0.55
GABRE-211ENST00000491339 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
GABRE-211ENST00000491339 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
GABRE-211ENST00000491339 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
GABRE-211ENST00000491339 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
GABRE-211ENST00000491339 NFATC2IPQ8NCF5 419 aa11.6□□□□□ -0.55
GABRE-211ENST00000491339 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
GABRE-211ENST00000491339 RNMTO43148 476 aaKnown RBP11.59□□□□□ -0.55
GABRE-211ENST00000491339 KCPQ6ZWJ8 1503 aa11.59□□□□□ -0.55
GABRE-211ENST00000491339 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
GABRE-211ENST00000491339 NEFMP07197 916 aa11.58□□□□□ -0.56
GABRE-211ENST00000491339 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
GABRE-211ENST00000491339 GNAT3A8MTJ3 354 aa11.58□□□□□ -0.56
GABRE-211ENST00000491339 U2AF1L5P0DN76 240 aaPredicted RBP11.58□□□□□ -0.56
GABRE-211ENST00000491339 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
GABRE-211ENST00000491339 U2AF1Q01081 240 aaKnown RBP eCLIP11.58□□□□□ -0.567e-7■■■■■ 26.8
GABRE-211ENST00000491339 TEFQ10587 303 aa11.58□□□□□ -0.56
GABRE-211ENST00000491339 RC3H1Q5TC82 1133 aaKnown RBP11.58□□□□□ -0.56
GABRE-211ENST00000491339 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
GABRE-211ENST00000491339 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
GABRE-211ENST00000491339 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
GABRE-211ENST00000491339 YY1P25490 414 aa11.56□□□□□ -0.56
GABRE-211ENST00000491339 TRAPPC3LQ5T215 181 aa11.56□□□□□ -0.56
GABRE-211ENST00000491339 LGR6Q9HBX8 967 aa11.56□□□□□ -0.56
GABRE-211ENST00000491339 AMIGO3Q86WK7 504 aa11.56□□□□□ -0.56
GABRE-211ENST00000491339 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
GABRE-211ENST00000491339 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
GABRE-211ENST00000491339 RPS6KA4O75676 772 aa11.55□□□□□ -0.56
GABRE-211ENST00000491339 RFC4P35249 363 aa11.55□□□□□ -0.56
GABRE-211ENST00000491339 CRKLP46109 303 aaKnown RBP11.55□□□□□ -0.56
GABRE-211ENST00000491339 GPR162Q16538 588 aa11.55□□□□□ -0.56
GABRE-211ENST00000491339 FCHSD2O94868 740 aa11.55□□□□□ -0.56
GABRE-211ENST00000491339 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
GABRE-211ENST00000491339 CD2APQ9Y5K6 639 aa11.55□□□□□ -0.56
GABRE-211ENST00000491339 LAMB4A4D0S4 1761 aa11.54□□□□□ -0.56
GABRE-211ENST00000491339 SCN7AQ01118 1682 aa11.54□□□□□ -0.56
GABRE-211ENST00000491339 SLC39A6Q13433 755 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 RALBP1Q15311 655 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 CCDC87Q9NVE4 849 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 CEMIPQ8WUJ3 1361 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
GABRE-211ENST00000491339 MMP10P09238 476 aa11.52□□□□□ -0.57
GABRE-211ENST00000491339 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
GABRE-211ENST00000491339 ARHGEF1Q92888 912 aaKnown RBP11.52□□□□□ -0.57
GABRE-211ENST00000491339 PNNQ9H307 717 aaKnown RBP11.52□□□□□ -0.57
GABRE-211ENST00000491339 COL15A1P39059 1388 aa11.52□□□□□ -0.57
GABRE-211ENST00000491339 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
GABRE-211ENST00000491339 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.57
GABRE-211ENST00000491339 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.57
GABRE-211ENST00000491339 C10orf71Q711Q0 1435 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms