RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 ITPK1Q13572 414 aa21.74■■□□□ 1.07
ARHGEF39-206ENST00000490970 AMIGO3Q86WK7 504 aa21.74■■□□□ 1.07
ARHGEF39-206ENST00000490970 LINC00116Q8NCU8 138 aa21.74■■□□□ 1.07
ARHGEF39-206ENST00000490970 C4BP0C0L5 1744 aa21.73■■□□□ 1.07
ARHGEF39-206ENST00000490970 MSL1Q68DK7 614 aa21.73■■□□□ 1.07
ARHGEF39-206ENST00000490970 KLHL34Q8N239 644 aa21.73■■□□□ 1.07
ARHGEF39-206ENST00000490970 PHF14O94880 888 aa21.72■■□□□ 1.07
ARHGEF39-206ENST00000490970 FLAD1Q8NFF5 587 aa21.72■■□□□ 1.07
ARHGEF39-206ENST00000490970 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
ARHGEF39-206ENST00000490970 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
ARHGEF39-206ENST00000490970 NFATC2IPQ8NCF5 419 aa21.7■■□□□ 1.06
ARHGEF39-206ENST00000490970 SLC4A9Q96Q91 983 aa21.7■■□□□ 1.06
ARHGEF39-206ENST00000490970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
ARHGEF39-206ENST00000490970 MAP3K5Q99683 1374 aa21.69■■□□□ 1.06
ARHGEF39-206ENST00000490970 AKAP4Q5JQC9 854 aa21.68■■□□□ 1.06
ARHGEF39-206ENST00000490970 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
ARHGEF39-206ENST00000490970 GNPATO15228 680 aa21.67■■□□□ 1.06
ARHGEF39-206ENST00000490970 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
ARHGEF39-206ENST00000490970 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
ARHGEF39-206ENST00000490970 YY1P25490 414 aa21.66■■□□□ 1.06
ARHGEF39-206ENST00000490970 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
ARHGEF39-206ENST00000490970 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
ARHGEF39-206ENST00000490970 SSFA2P28290 1259 aa21.65■■□□□ 1.06
ARHGEF39-206ENST00000490970 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
ARHGEF39-206ENST00000490970 NLGN2Q8NFZ4 835 aa21.64■■□□□ 1.05
ARHGEF39-206ENST00000490970 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
ARHGEF39-206ENST00000490970 SCN11AQ9UI33 1791 aa21.63■■□□□ 1.05
ARHGEF39-206ENST00000490970 SLC52A2Q9HAB3 445 aa21.62■■□□□ 1.05
ARHGEF39-206ENST00000490970 PPP2R1AP30153 589 aa21.61■■□□□ 1.05
ARHGEF39-206ENST00000490970 GPR162Q16538 588 aa21.6■■□□□ 1.05
ARHGEF39-206ENST00000490970 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
ARHGEF39-206ENST00000490970 RTCBQ9Y3I0 505 aaKnown RBP21.6■■□□□ 1.05
ARHGEF39-206ENST00000490970 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
ARHGEF39-206ENST00000490970 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
ARHGEF39-206ENST00000490970 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
ARHGEF39-206ENST00000490970 SLC39A6Q13433 755 aa21.58■■□□□ 1.05
ARHGEF39-206ENST00000490970 TRAPPC3LQ5T215 181 aa21.58■■□□□ 1.05
ARHGEF39-206ENST00000490970 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
ARHGEF39-206ENST00000490970 RPS6KA4O75676 772 aa21.57■■□□□ 1.04
ARHGEF39-206ENST00000490970 COL5A3P25940 1745 aaPredicted RBP21.57■■□□□ 1.04
ARHGEF39-206ENST00000490970 ARHGEF1Q92888 912 aaKnown RBP21.56■■□□□ 1.04
ARHGEF39-206ENST00000490970 PHACTR3Q96KR7 559 aa21.55■■□□□ 1.04
ARHGEF39-206ENST00000490970 NUDCQ9Y266 331 aa21.55■■□□□ 1.04
ARHGEF39-206ENST00000490970 CD2APQ9Y5K6 639 aa21.55■■□□□ 1.04
ARHGEF39-206ENST00000490970 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
ARHGEF39-206ENST00000490970 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
ARHGEF39-206ENST00000490970 MRC1P22897 1456 aa21.54■■□□□ 1.04
ARHGEF39-206ENST00000490970 PRKAR2BP31323 418 aa21.54■■□□□ 1.04
ARHGEF39-206ENST00000490970 CRKLP46109 303 aaKnown RBP21.54■■□□□ 1.04
ARHGEF39-206ENST00000490970 DNAJC10Q8IXB1 793 aa21.54■■□□□ 1.04
ARHGEF39-206ENST00000490970 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
ARHGEF39-206ENST00000490970 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 U2AF1L5P0DN76 240 aaPredicted RBP21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 ADRA2BP18089 450 aa21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 U2AF1Q01081 240 aaKnown RBP eCLIP21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 IL17REQ8NFR9 667 aa21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 RSPH6AQ9H0K4 717 aa21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 ADAMTS7Q9UKP4 1686 aa21.53■■□□□ 1.04
ARHGEF39-206ENST00000490970 TJP1Q07157 1748 aa21.52■■□□□ 1.04
ARHGEF39-206ENST00000490970 RFC4P35249 363 aa21.52■■□□□ 1.04
ARHGEF39-206ENST00000490970 MMP10P09238 476 aa21.51■■□□□ 1.03
ARHGEF39-206ENST00000490970 YBX3P16989 372 aaKnown RBP eCLIP21.51■■□□□ 1.03
ARHGEF39-206ENST00000490970 INTS5Q6P9B9 1019 aaKnown RBP21.51■■□□□ 1.03
ARHGEF39-206ENST00000490970 NLGN1Q8N2Q7 840 aa21.5■■□□□ 1.03
ARHGEF39-206ENST00000490970 GYS1P13807 737 aa21.49■■□□□ 1.03
ARHGEF39-206ENST00000490970 TEFQ10587 303 aa21.48■■□□□ 1.03
ARHGEF39-206ENST00000490970 SRP68Q9UHB9 627 aaKnown RBP21.48■■□□□ 1.03
ARHGEF39-206ENST00000490970 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
ARHGEF39-206ENST00000490970 CYP19A1P11511 503 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF39-206ENST00000490970 CCDC87Q9NVE4 849 aa21.47■■□□□ 1.03
ARHGEF39-206ENST00000490970 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
ARHGEF39-206ENST00000490970 CICQ96RK0 1608 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF39-206ENST00000490970 UTRNP46939 3433 aa21.46■■□□□ 1.03
ARHGEF39-206ENST00000490970 FCHSD2O94868 740 aa21.46■■□□□ 1.03
ARHGEF39-206ENST00000490970 TTC5Q8N0Z6 440 aa21.46■■□□□ 1.03
ARHGEF39-206ENST00000490970 CHD4Q14839 1912 aa21.46■■□□□ 1.03
ARHGEF39-206ENST00000490970 C4AP0C0L4 1744 aa21.45■■□□□ 1.02
ARHGEF39-206ENST00000490970 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
ARHGEF39-206ENST00000490970 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
ARHGEF39-206ENST00000490970 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
ARHGEF39-206ENST00000490970 FKBP8Q14318 412 aa21.43■■□□□ 1.02
ARHGEF39-206ENST00000490970 ZNF790Q6PG37 636 aa21.43■■□□□ 1.02
ARHGEF39-206ENST00000490970 ZNF784Q8NCA9 323 aaPredicted RBP21.43■■□□□ 1.02
ARHGEF39-206ENST00000490970 ZNF496Q96IT1 587 aaPredicted RBP21.43■■□□□ 1.02
ARHGEF39-206ENST00000490970 ZBTB1Q9Y2K1 713 aa21.43■■□□□ 1.02
ARHGEF39-206ENST00000490970 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
ARHGEF39-206ENST00000490970 SOS1Q07889 1333 aaPredicted RBP21.42■■□□□ 1.02
ARHGEF39-206ENST00000490970 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
ARHGEF39-206ENST00000490970 PARP3Q9Y6F1 533 aa21.42■■□□□ 1.02
ARHGEF39-206ENST00000490970 UBR2Q8IWV8 1755 aa21.41■■□□□ 1.02
ARHGEF39-206ENST00000490970 KCNQ3O43525 872 aa21.41■■□□□ 1.02
ARHGEF39-206ENST00000490970 SIPA1L3O60292 1781 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF39-206ENST00000490970 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
ARHGEF39-206ENST00000490970 USPL1Q5W0Q7 1092 aa21.4■■□□□ 1.02
ARHGEF39-206ENST00000490970 MCM10Q7L590 875 aa21.4■■□□□ 1.02
ARHGEF39-206ENST00000490970 HEG1Q9ULI3 1381 aa21.39■■□□□ 1.02
ARHGEF39-206ENST00000490970 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
ARHGEF39-206ENST00000490970 ZPR1O75312 459 aa21.39■■□□□ 1.01
ARHGEF39-206ENST00000490970 DCTN1Q14203 1278 aa21.39■■□□□ 1.01
ARHGEF39-206ENST00000490970 RTF1Q92541 710 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms