RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
IMP4-216ENST00000490895 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
IMP4-216ENST00000490895 C1orf141Q5JVX7 400 aa20.81■□□□□ 0.92
IMP4-216ENST00000490895 MSL1Q68DK7 614 aa20.81■□□□□ 0.92
IMP4-216ENST00000490895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.79■□□□□ 0.92
IMP4-216ENST00000490895 SSFA2P28290 1259 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 CABP4P57796 275 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 KLHL34Q8N239 644 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 SLC4A9Q96Q91 983 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 UBR3Q6ZT12 1888 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 UTRNP46939 3433 aa20.79■□□□□ 0.92
IMP4-216ENST00000490895 DIAPH1O60610 1272 aaKnown RBP20.77■□□□□ 0.92
IMP4-216ENST00000490895 PHF14O94880 888 aa20.77■□□□□ 0.92
IMP4-216ENST00000490895 GNPATO15228 680 aa20.76■□□□□ 0.91
IMP4-216ENST00000490895 HMOX1P09601 288 aa20.76■□□□□ 0.91
IMP4-216ENST00000490895 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
IMP4-216ENST00000490895 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
IMP4-216ENST00000490895 AKAP4Q5JQC9 854 aa20.75■□□□□ 0.91
IMP4-216ENST00000490895 NFATC2IPQ8NCF5 419 aa20.75■□□□□ 0.91
IMP4-216ENST00000490895 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
IMP4-216ENST00000490895 CNGB1Q14028 1251 aaPredicted RBP20.74■□□□□ 0.91
IMP4-216ENST00000490895 COL3A1P02461 1466 aaPredicted RBP20.74■□□□□ 0.91
IMP4-216ENST00000490895 GPR162Q16538 588 aa20.73■□□□□ 0.91
IMP4-216ENST00000490895 RC3H1Q5TC82 1133 aaKnown RBP20.73■□□□□ 0.91
IMP4-216ENST00000490895 CD2APQ9Y5K6 639 aa20.71■□□□□ 0.91
IMP4-216ENST00000490895 SCN11AQ9UI33 1791 aa20.71■□□□□ 0.91
IMP4-216ENST00000490895 CNTNAP4Q9C0A0 1308 aa20.71■□□□□ 0.91
IMP4-216ENST00000490895 GOLGB1Q14789 3259 aaKnown RBP20.71■□□□□ 0.91
IMP4-216ENST00000490895 PTCD1O75127 700 aaKnown RBP20.7■□□□□ 0.9
IMP4-216ENST00000490895 MTHFSDQ2M296 383 aaKnown RBP20.7■□□□□ 0.9
IMP4-216ENST00000490895 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
IMP4-216ENST00000490895 RTCBQ9Y3I0 505 aaKnown RBP20.7■□□□□ 0.9
IMP4-216ENST00000490895 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
IMP4-216ENST00000490895 SLC52A2Q9HAB3 445 aa20.69■□□□□ 0.9
IMP4-216ENST00000490895 COL5A3P25940 1745 aaPredicted RBP20.68■□□□□ 0.9
IMP4-216ENST00000490895 ADRA2BP18089 450 aa20.68■□□□□ 0.9
IMP4-216ENST00000490895 MRC1P22897 1456 aa20.68■□□□□ 0.9
IMP4-216ENST00000490895 U2SURPO15042 1029 aaKnown RBP20.67■□□□□ 0.9
IMP4-216ENST00000490895 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
IMP4-216ENST00000490895 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
IMP4-216ENST00000490895 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
IMP4-216ENST00000490895 ARHGEF1Q92888 912 aaKnown RBP20.66■□□□□ 0.9
IMP4-216ENST00000490895 CHD4Q14839 1912 aa20.66■□□□□ 0.9
IMP4-216ENST00000490895 YBX3P16989 372 aaKnown RBP eCLIP20.65■□□□□ 0.92e-12■■□□□ 12
IMP4-216ENST00000490895 MYH14Q7Z406 1995 aaKnown RBP20.65■□□□□ 0.9
IMP4-216ENST00000490895 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
IMP4-216ENST00000490895 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.89
IMP4-216ENST00000490895 CICQ96RK0 1608 aaPredicted RBP20.64■□□□□ 0.89
IMP4-216ENST00000490895 MMP10P09238 476 aa20.63■□□□□ 0.89
IMP4-216ENST00000490895 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
IMP4-216ENST00000490895 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
IMP4-216ENST00000490895 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
IMP4-216ENST00000490895 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
IMP4-216ENST00000490895 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
IMP4-216ENST00000490895 RFC4P35249 363 aa20.62■□□□□ 0.89
IMP4-216ENST00000490895 TJP1Q07157 1748 aa20.61■□□□□ 0.89
IMP4-216ENST00000490895 GYS1P13807 737 aa20.61■□□□□ 0.89
IMP4-216ENST00000490895 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
IMP4-216ENST00000490895 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
IMP4-216ENST00000490895 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
IMP4-216ENST00000490895 DNAJC10Q8IXB1 793 aa20.6■□□□□ 0.89
IMP4-216ENST00000490895 GNAT3A8MTJ3 354 aa20.59■□□□□ 0.89
IMP4-216ENST00000490895 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
IMP4-216ENST00000490895 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.89
IMP4-216ENST00000490895 VIRMAQ69YN4 1812 aaKnown RBP20.58■□□□□ 0.89
IMP4-216ENST00000490895 IL17REQ8NFR9 667 aa20.58■□□□□ 0.89
IMP4-216ENST00000490895 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
IMP4-216ENST00000490895 NUDCQ9Y266 331 aa20.58■□□□□ 0.89
IMP4-216ENST00000490895 CYP19A1P11511 503 aaPredicted RBP20.57■□□□□ 0.88
IMP4-216ENST00000490895 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
IMP4-216ENST00000490895 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
IMP4-216ENST00000490895 C4AP0C0L4 1744 aa20.56■□□□□ 0.88
IMP4-216ENST00000490895 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
IMP4-216ENST00000490895 USP42Q9H9J4 1324 aaKnown RBP20.55■□□□□ 0.88
IMP4-216ENST00000490895 SRP68Q9UHB9 627 aaKnown RBP20.55■□□□□ 0.88
IMP4-216ENST00000490895 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
IMP4-216ENST00000490895 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
IMP4-216ENST00000490895 TEFQ10587 303 aa20.54■□□□□ 0.88
IMP4-216ENST00000490895 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
IMP4-216ENST00000490895 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
IMP4-216ENST00000490895 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
IMP4-216ENST00000490895 FKBP8Q14318 412 aa20.53■□□□□ 0.88
IMP4-216ENST00000490895 KIF13BQ9NQT8 1826 aa20.53■□□□□ 0.88
IMP4-216ENST00000490895 UBR2Q8IWV8 1755 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 PXDNLA1KZ92 1463 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 FCHSD2O94868 740 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 TGFB2P61812 414 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 ZNF790Q6PG37 636 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
IMP4-216ENST00000490895 ZNF496Q96IT1 587 aaPredicted RBP20.51■□□□□ 0.87
IMP4-216ENST00000490895 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
IMP4-216ENST00000490895 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
IMP4-216ENST00000490895 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
IMP4-216ENST00000490895 ZPR1O75312 459 aa20.49■□□□□ 0.87
IMP4-216ENST00000490895 STARD3NLO95772 234 aa20.49■□□□□ 0.87
IMP4-216ENST00000490895 DDR1Q08345 913 aa20.49■□□□□ 0.87
IMP4-216ENST00000490895 HEG1Q9ULI3 1381 aa20.48■□□□□ 0.87
IMP4-216ENST00000490895 KIAA1551Q9HCM1 1747 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms