RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
FNDC3B-211ENST00000490832 USP17L1Q7RTZ2 530 aa12.54□□□□□ -0.4
FNDC3B-211ENST00000490832 PCDHB11Q9Y5F2 797 aa12.54□□□□□ -0.4
FNDC3B-211ENST00000490832 EFCAB5A4FU69 1503 aa12.53□□□□□ -0.4
FNDC3B-211ENST00000490832 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
FNDC3B-211ENST00000490832 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
FNDC3B-211ENST00000490832 RFX1P22670 979 aa12.53□□□□□ -0.4
FNDC3B-211ENST00000490832 EML3Q32P44 896 aa12.53□□□□□ -0.4
FNDC3B-211ENST00000490832 NEO1Q92859 1461 aa12.53□□□□□ -0.4
FNDC3B-211ENST00000490832 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
FNDC3B-211ENST00000490832 NNTQ13423 1086 aa12.52□□□□□ -0.41
FNDC3B-211ENST00000490832 NCOA4Q13772 614 aa12.52□□□□□ -0.41
FNDC3B-211ENST00000490832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.41
FNDC3B-211ENST00000490832 J3QL48 77 aa12.51□□□□□ -0.41
FNDC3B-211ENST00000490832 NR3C2P08235 984 aa12.51□□□□□ -0.41
FNDC3B-211ENST00000490832 TSGA10IPQ3SY00 556 aa12.51□□□□□ -0.41
FNDC3B-211ENST00000490832 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
FNDC3B-211ENST00000490832 PBXIP1Q96AQ6 731 aa12.51□□□□□ -0.41
FNDC3B-211ENST00000490832 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
FNDC3B-211ENST00000490832 PPP1R26Q5T8A7 1209 aaPredicted RBP12.5□□□□□ -0.41
FNDC3B-211ENST00000490832 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
FNDC3B-211ENST00000490832 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
FNDC3B-211ENST00000490832 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
FNDC3B-211ENST00000490832 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
FNDC3B-211ENST00000490832 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
FNDC3B-211ENST00000490832 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
FNDC3B-211ENST00000490832 PGPEP1Q9NXJ5 209 aa12.49□□□□□ -0.41
FNDC3B-211ENST00000490832 FANCAO15360 1455 aa12.48□□□□□ -0.41
FNDC3B-211ENST00000490832 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
FNDC3B-211ENST00000490832 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
FNDC3B-211ENST00000490832 SMPD1P17405 629 aa12.48□□□□□ -0.41
FNDC3B-211ENST00000490832 USP4Q13107 963 aa12.48□□□□□ -0.41
FNDC3B-211ENST00000490832 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
FNDC3B-211ENST00000490832 AKNAQ7Z591 1439 aa12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 VRTNQ9H8Y1 702 aa12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 TMPRSS4Q9NRS4 437 aa12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 NOD1Q9Y239 953 aa12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 RICTORQ6R327 1708 aa12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 MADDQ8WXG6 1647 aa12.47□□□□□ -0.41
FNDC3B-211ENST00000490832 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 PTPRMP28827 1452 aa12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 ATP5J2-PTCD1G3V325 749 aa12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 MYCP01106 439 aaPredicted RBP12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 ERVK-9P63128 1117 aa12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 MYT1Q01538 1121 aa12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
FNDC3B-211ENST00000490832 ARHGEF40Q8TER5 1519 aa12.46□□□□□ -0.42
FNDC3B-211ENST00000490832 BCORL1Q5H9F3 1711 aa12.45□□□□□ -0.42
FNDC3B-211ENST00000490832 SRPK2P78362 688 aaKnown RBP12.45□□□□□ -0.42
FNDC3B-211ENST00000490832 KANK4Q5T7N3 995 aaPredicted RBP12.45□□□□□ -0.42
FNDC3B-211ENST00000490832 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
FNDC3B-211ENST00000490832 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
FNDC3B-211ENST00000490832 SIGLEC1Q9BZZ2 1709 aa12.45□□□□□ -0.42
FNDC3B-211ENST00000490832 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
FNDC3B-211ENST00000490832 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
FNDC3B-211ENST00000490832 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
FNDC3B-211ENST00000490832 KIF14Q15058 1648 aa12.44□□□□□ -0.42
FNDC3B-211ENST00000490832 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
FNDC3B-211ENST00000490832 RIMS1Q86UR5 1692 aaKnown RBP12.43□□□□□ -0.42
FNDC3B-211ENST00000490832 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
FNDC3B-211ENST00000490832 SCTRP47872 440 aa12.42□□□□□ -0.42
FNDC3B-211ENST00000490832 ATP1A2P50993 1020 aa12.42□□□□□ -0.42
FNDC3B-211ENST00000490832 WDR4P57081 412 aaKnown RBP12.42□□□□□ -0.42
FNDC3B-211ENST00000490832 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
FNDC3B-211ENST00000490832 LILRA1O75019 489 aa12.41□□□□□ -0.42
FNDC3B-211ENST00000490832 MLECQ14165 292 aa12.41□□□□□ -0.42
FNDC3B-211ENST00000490832 ITPKCQ96DU7 683 aa12.41□□□□□ -0.42
FNDC3B-211ENST00000490832 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
FNDC3B-211ENST00000490832 ZFYVE16Q7Z3T8 1539 aa12.41□□□□□ -0.42
FNDC3B-211ENST00000490832 PLCH2O75038 1416 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 SCAPERQ9BY12 1400 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 TIMP2P16035 220 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 GTF2IP78347 998 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 HPS1Q92902 700 aa12.4□□□□□ -0.42
FNDC3B-211ENST00000490832 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 ZMYM4Q5VZL5 1548 aa12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 ATG7O95352 703 aa12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 RASA1P20936 1047 aa12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 OGFOD1Q8N543 542 aa12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 MYO5CQ9NQX4 1742 aa12.39□□□□□ -0.43
FNDC3B-211ENST00000490832 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
FNDC3B-211ENST00000490832 GFRA3O60609 400 aa12.38□□□□□ -0.43
FNDC3B-211ENST00000490832 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
FNDC3B-211ENST00000490832 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
FNDC3B-211ENST00000490832 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
FNDC3B-211ENST00000490832 DNAAF2Q9NVR5 837 aaKnown RBP12.38□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L10C9JJH3 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms