RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MICALL2Q8IY33 904 aa10.35□□□□□ -0.75
CLDN1-202ENST00000490800 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
CLDN1-202ENST00000490800 MON2Q7Z3U7 1717 aa10.35□□□□□ -0.75
CLDN1-202ENST00000490800 RGPD5Q99666 1765 aa10.34□□□□□ -0.75
CLDN1-202ENST00000490800 IL2RBP14784 551 aa10.34□□□□□ -0.75
CLDN1-202ENST00000490800 PLCG2P16885 1265 aa10.34□□□□□ -0.75
CLDN1-202ENST00000490800 MFSD10Q14728 455 aa10.34□□□□□ -0.75
CLDN1-202ENST00000490800 ACSBG1Q96GR2 724 aa10.34□□□□□ -0.75
CLDN1-202ENST00000490800 G3V3G9 751 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 FYB1O15117 783 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 AMPHP49418 695 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 GGNBP2Q9H3C7 697 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 LRRC37A3O60309 1634 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 BCL9O00512 1426 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
CLDN1-202ENST00000490800 HOXC9P31274 260 aa10.32□□□□□ -0.76
CLDN1-202ENST00000490800 TXNRD1Q16881 649 aa10.32□□□□□ -0.76
CLDN1-202ENST00000490800 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
CLDN1-202ENST00000490800 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
CLDN1-202ENST00000490800 ANKRD36BQ8N2N9 1353 aa10.31□□□□□ -0.76
CLDN1-202ENST00000490800 RRS1Q15050 365 aaKnown RBP10.31□□□□□ -0.76
CLDN1-202ENST00000490800 DDX54Q8TDD1 881 aaKnown RBP10.31□□□□□ -0.76
CLDN1-202ENST00000490800 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
CLDN1-202ENST00000490800 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
CLDN1-202ENST00000490800 ABCC6O95255 1503 aa10.31□□□□□ -0.76
CLDN1-202ENST00000490800 LRP5O75197 1615 aa10.3□□□□□ -0.76
CLDN1-202ENST00000490800 SEC24BO95487 1268 aa10.3□□□□□ -0.76
CLDN1-202ENST00000490800 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
CLDN1-202ENST00000490800 CARD14Q9BXL6 1004 aa10.3□□□□□ -0.76
CLDN1-202ENST00000490800 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
CLDN1-202ENST00000490800 SPON1Q9HCB6 807 aa10.3□□□□□ -0.76
CLDN1-202ENST00000490800 USP54Q70EL1 1684 aa10.29□□□□□ -0.76
CLDN1-202ENST00000490800 RREB1Q92766 1687 aa10.29□□□□□ -0.76
CLDN1-202ENST00000490800 ANP32CO43423 234 aa10.29□□□□□ -0.76
CLDN1-202ENST00000490800 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
CLDN1-202ENST00000490800 TNS2Q63HR2 1409 aa10.29□□□□□ -0.76
CLDN1-202ENST00000490800 SBF2Q86WG5 1849 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 NUP188Q5SRE5 1749 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 SLC15A2Q16348 729 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 NBPF6Q5VWK0 638 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 NBPF4Q96M43 638 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
CLDN1-202ENST00000490800 STK32BQ9NY57 414 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 PPP1R1BQ9UD71 204 aaPredicted RBP10.28□□□□□ -0.76
CLDN1-202ENST00000490800 LTN1O94822 1766 aa10.28□□□□□ -0.76
CLDN1-202ENST00000490800 ZBTB7AO95365 584 aa10.27□□□□□ -0.77
CLDN1-202ENST00000490800 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.77
CLDN1-202ENST00000490800 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.77
CLDN1-202ENST00000490800 ZCRB1Q8TBF4 217 aaKnown RBP10.27□□□□□ -0.77
CLDN1-202ENST00000490800 PANK3Q9H999 370 aa10.27□□□□□ -0.77
CLDN1-202ENST00000490800 MYOM1P52179 1685 aa10.27□□□□□ -0.77
CLDN1-202ENST00000490800 WNK3Q9BYP7 1800 aa10.26□□□□□ -0.77
CLDN1-202ENST00000490800 PER1O15534 1290 aaPredicted RBP10.26□□□□□ -0.77
CLDN1-202ENST00000490800 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
CLDN1-202ENST00000490800 SYTL4Q96C24 671 aaPredicted RBP10.26□□□□□ -0.77
CLDN1-202ENST00000490800 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
CLDN1-202ENST00000490800 LRRC4BQ9NT99 713 aa10.25□□□□□ -0.77
CLDN1-202ENST00000490800 TULP1O00294 542 aaPredicted RBP10.24□□□□□ -0.77
CLDN1-202ENST00000490800 SEMA3EO15041 775 aa10.24□□□□□ -0.77
CLDN1-202ENST00000490800 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
CLDN1-202ENST00000490800 DSG2Q14126 1118 aa10.24□□□□□ -0.77
CLDN1-202ENST00000490800 SLC39A7Q92504 469 aa10.24□□□□□ -0.77
CLDN1-202ENST00000490800 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
CLDN1-202ENST00000490800 EMILIN1Q9Y6C2 1016 aa10.24□□□□□ -0.77
CLDN1-202ENST00000490800 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 PTGER2P43116 358 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 KCNQ4P56696 695 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 CAMK2BQ13554 666 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
CLDN1-202ENST00000490800 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
CLDN1-202ENST00000490800 RTL1A6NKG5 1358 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 INSRP06213 1382 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
CLDN1-202ENST00000490800 RGPD3A6NKT7 1758 aaPredicted RBP10.22□□□□□ -0.77
CLDN1-202ENST00000490800 RGPD4Q7Z3J3 1758 aa10.22□□□□□ -0.77
CLDN1-202ENST00000490800 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
CLDN1-202ENST00000490800 ZNF827Q17R98 1081 aa10.22□□□□□ -0.77
CLDN1-202ENST00000490800 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
CLDN1-202ENST00000490800 FLT4P35916 1363 aa10.22□□□□□ -0.77
CLDN1-202ENST00000490800 C2orf72A6NCS6 295 aa10.21□□□□□ -0.77
CLDN1-202ENST00000490800 SLC27A3Q5K4L6 730 aa10.21□□□□□ -0.77
CLDN1-202ENST00000490800 LHX8Q68G74 356 aa10.21□□□□□ -0.77
CLDN1-202ENST00000490800 MTFR1LQ9H019 292 aa10.21□□□□□ -0.77
CLDN1-202ENST00000490800 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.78
CLDN1-202ENST00000490800 SMG6Q86US8 1419 aaKnown RBP10.21□□□□□ -0.78
CLDN1-202ENST00000490800 MEGF6O75095 1541 aa10.21□□□□□ -0.78
CLDN1-202ENST00000490800 NHSQ6T4R5 1651 aa10.21□□□□□ -0.78
CLDN1-202ENST00000490800 C7P10643 843 aa10.2□□□□□ -0.78
CLDN1-202ENST00000490800 TNNT2P45379 298 aaPredicted RBP10.2□□□□□ -0.78
CLDN1-202ENST00000490800 KIF24Q5T7B8 1368 aa10.2□□□□□ -0.78
CLDN1-202ENST00000490800 KAT6BQ8WYB5 2073 aa10.2□□□□□ -0.78
CLDN1-202ENST00000490800 POLKQ9UBT6 870 aa10.2□□□□□ -0.78
CLDN1-202ENST00000490800 KNSTRNQ9Y448 316 aa10.2□□□□□ -0.78
CLDN1-202ENST00000490800 TESPA1A2RU30 521 aaPredicted RBP10.19□□□□□ -0.78
CLDN1-202ENST00000490800 CNGB1Q14028 1251 aaPredicted RBP10.19□□□□□ -0.78
CLDN1-202ENST00000490800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms