RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
SRRM1-217ENST00000490543 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
SRRM1-217ENST00000490543 LHX6Q9UPM6 363 aa13.06□□□□□ -0.32
SRRM1-217ENST00000490543 TXNRD1Q16881 649 aa13.05□□□□□ -0.32
SRRM1-217ENST00000490543 SYT17Q9BSW7 474 aa13.05□□□□□ -0.32
SRRM1-217ENST00000490543 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
SRRM1-217ENST00000490543 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
SRRM1-217ENST00000490543 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
SRRM1-217ENST00000490543 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-217ENST00000490543 COL18A1P39060 1754 aa13.04□□□□□ -0.32
SRRM1-217ENST00000490543 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
SRRM1-217ENST00000490543 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
SRRM1-217ENST00000490543 MYOM1P52179 1685 aa13.04□□□□□ -0.32
SRRM1-217ENST00000490543 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-217ENST00000490543 USP6P35125 1406 aa13.04□□□□□ -0.32
SRRM1-217ENST00000490543 SLIT3O75094 1523 aa13.03□□□□□ -0.32
SRRM1-217ENST00000490543 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
SRRM1-217ENST00000490543 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
SRRM1-217ENST00000490543 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
SRRM1-217ENST00000490543 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
SRRM1-217ENST00000490543 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
SRRM1-217ENST00000490543 MFSD10Q14728 455 aa13.02□□□□□ -0.33
SRRM1-217ENST00000490543 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
SRRM1-217ENST00000490543 CDCA7Q9BWT1 371 aaPredicted RBP13.02□□□□□ -0.33
SRRM1-217ENST00000490543 BCL9O00512 1426 aa13.02□□□□□ -0.33
SRRM1-217ENST00000490543 UTRNP46939 3433 aa13.01□□□□□ -0.33
SRRM1-217ENST00000490543 TBC1D12O60347 775 aa13.01□□□□□ -0.33
SRRM1-217ENST00000490543 CARD10Q9BWT7 1032 aa13.01□□□□□ -0.33
SRRM1-217ENST00000490543 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
SRRM1-217ENST00000490543 EXOC5O00471 708 aa13□□□□□ -0.33
SRRM1-217ENST00000490543 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
SRRM1-217ENST00000490543 MTFR1LQ9H019 292 aa13□□□□□ -0.33
SRRM1-217ENST00000490543 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
SRRM1-217ENST00000490543 PIK3C2AO00443 1686 aa12.99□□□□□ -0.33
SRRM1-217ENST00000490543 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
SRRM1-217ENST00000490543 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
SRRM1-217ENST00000490543 ACSBG1Q96GR2 724 aa12.99□□□□□ -0.33
SRRM1-217ENST00000490543 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
SRRM1-217ENST00000490543 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
SRRM1-217ENST00000490543 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
SRRM1-217ENST00000490543 C1QTNF8P60827 252 aa12.97□□□□□ -0.33
SRRM1-217ENST00000490543 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
SRRM1-217ENST00000490543 ARXQ96QS3 562 aa12.97□□□□□ -0.33
SRRM1-217ENST00000490543 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
SRRM1-217ENST00000490543 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.33
SRRM1-217ENST00000490543 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
SRRM1-217ENST00000490543 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
SRRM1-217ENST00000490543 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
SRRM1-217ENST00000490543 CHD4Q14839 1912 aa12.95□□□□□ -0.34
SRRM1-217ENST00000490543 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
SRRM1-217ENST00000490543 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
SRRM1-217ENST00000490543 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
SRRM1-217ENST00000490543 TNS2Q63HR2 1409 aa12.93□□□□□ -0.34
SRRM1-217ENST00000490543 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
SRRM1-217ENST00000490543 NFAT5O94916 1531 aa12.93□□□□□ -0.34
SRRM1-217ENST00000490543 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
SRRM1-217ENST00000490543 GPR162Q16538 588 aa12.92□□□□□ -0.34
SRRM1-217ENST00000490543 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
SRRM1-217ENST00000490543 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
SRRM1-217ENST00000490543 MAP3K5Q99683 1374 aa12.92□□□□□ -0.34
SRRM1-217ENST00000490543 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
SRRM1-217ENST00000490543 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
SRRM1-217ENST00000490543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
SRRM1-217ENST00000490543 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
SRRM1-217ENST00000490543 EMILIN3Q9NT22 766 aa12.91□□□□□ -0.34
SRRM1-217ENST00000490543 NHSQ6T4R5 1651 aa12.91□□□□□ -0.34
SRRM1-217ENST00000490543 IL2RBP14784 551 aa12.9□□□□□ -0.34
SRRM1-217ENST00000490543 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
SRRM1-217ENST00000490543 PBX2P40425 430 aa12.89□□□□□ -0.35
SRRM1-217ENST00000490543 KCNQ4P56696 695 aa12.89□□□□□ -0.35
SRRM1-217ENST00000490543 NME9Q86XW9 330 aa12.89□□□□□ -0.35
SRRM1-217ENST00000490543 ABCC6O95255 1503 aa12.88□□□□□ -0.35
SRRM1-217ENST00000490543 BTAF1O14981 1849 aa12.88□□□□□ -0.35
SRRM1-217ENST00000490543 NLGN2Q8NFZ4 835 aa12.88□□□□□ -0.35
SRRM1-217ENST00000490543 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
SRRM1-217ENST00000490543 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
SRRM1-217ENST00000490543 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
SRRM1-217ENST00000490543 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
SRRM1-217ENST00000490543 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
SRRM1-217ENST00000490543 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
SRRM1-217ENST00000490543 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
SRRM1-217ENST00000490543 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
SRRM1-217ENST00000490543 SLC16A10Q8TF71 515 aa12.86□□□□□ -0.35
SRRM1-217ENST00000490543 EVI5O60447 810 aa12.85□□□□□ -0.35
SRRM1-217ENST00000490543 POLD1P28340 1107 aa12.85□□□□□ -0.35
SRRM1-217ENST00000490543 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
SRRM1-217ENST00000490543 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
SRRM1-217ENST00000490543 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
SRRM1-217ENST00000490543 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
SRRM1-217ENST00000490543 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
SRRM1-217ENST00000490543 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
SRRM1-217ENST00000490543 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
SRRM1-217ENST00000490543 TFCP2L1Q9NZI6 479 aa12.84□□□□□ -0.35
SRRM1-217ENST00000490543 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
SRRM1-217ENST00000490543 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
SRRM1-217ENST00000490543 SYTL4Q96C24 671 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-217ENST00000490543 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
SRRM1-217ENST00000490543 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
SRRM1-217ENST00000490543 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
SRRM1-217ENST00000490543 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms