RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PRMT3O60678 531 aa8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 SEC13P55735 322 aa8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 SKOR1P84550 965 aa8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 SND1Q7KZF4 910 aaKnown RBP eCLIP8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 TRMT44Q8IYL2 757 aaKnown RBP8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 ANKLE1Q8NAG6 615 aa8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 CLP1Q92989 425 aaKnown RBP8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 SCNN1AP37088 669 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 CCDC27Q2M243 656 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 SIX5Q8N196 739 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 EHBP1Q8NDI1 1231 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 PRIMPOLQ96LW4 560 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 HINFPQ9BQA5 517 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 PCDHGA11Q9Y5H2 935 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 POLA1P09884 1462 aaPredicted RBP8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 GLI2P10070 1586 aa8.18□□□□□ -1.1
SSX2IP-208ENST00000490476 SETD1AO15047 1707 aaKnown RBP8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 ARID4AP29374 1257 aaPredicted RBP8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 SWI5Q1ZZU3 235 aa8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 GNEQ9Y223 722 aaKnown RBP8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 GRIN2BQ13224 1484 aa8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 RIMS1Q86UR5 1692 aaKnown RBP8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 STRCQ7RTU9 1775 aa8.17□□□□□ -1.1
SSX2IP-208ENST00000490476 ERVH48-1M5A8F1 160 aa8.16□□□□□ -1.1
SSX2IP-208ENST00000490476 DKK1O94907 266 aa8.16□□□□□ -1.1
SSX2IP-208ENST00000490476 WNT7BP56706 349 aa8.16□□□□□ -1.1
SSX2IP-208ENST00000490476 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
SSX2IP-208ENST00000490476 BCORL1Q5H9F3 1711 aa8.15□□□□□ -1.1
SSX2IP-208ENST00000490476 CFAP43Q8NDM7 1665 aa8.15□□□□□ -1.1
SSX2IP-208ENST00000490476 MAP3K4Q9Y6R4 1608 aa8.15□□□□□ -1.1
SSX2IP-208ENST00000490476 SCTRP47872 440 aa8.15□□□□□ -1.1
SSX2IP-208ENST00000490476 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
SSX2IP-208ENST00000490476 TXNDC2Q86VQ3 553 aa8.15□□□□□ -1.1
SSX2IP-208ENST00000490476 TEX14Q8IWB6 1497 aa8.14□□□□□ -1.11
SSX2IP-208ENST00000490476 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
SSX2IP-208ENST00000490476 SERPINB4P48594 390 aa8.14□□□□□ -1.11
SSX2IP-208ENST00000490476 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
SSX2IP-208ENST00000490476 RAD54L2Q9Y4B4 1467 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 FSHRP23945 695 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 Q6ZNB5 142 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 TSEN2Q8NCE0 465 aaKnown RBP8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 TMPRSS4Q9NRS4 437 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 TLL2Q9Y6L7 1015 aa8.13□□□□□ -1.11
SSX2IP-208ENST00000490476 RPIAP49247 311 aa8.12□□□□□ -1.11
SSX2IP-208ENST00000490476 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
SSX2IP-208ENST00000490476 GAS2L2Q8NHY3 880 aa8.12□□□□□ -1.11
SSX2IP-208ENST00000490476 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
SSX2IP-208ENST00000490476 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 GFRA3O60609 400 aa8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 ABL1P00519 1130 aa8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 LIAT1Q6ZQX7 453 aa8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
SSX2IP-208ENST00000490476 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
SSX2IP-208ENST00000490476 ANO2Q9NQ90 1003 aa8.1□□□□□ -1.11
SSX2IP-208ENST00000490476 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
SSX2IP-208ENST00000490476 WIZO95785 1651 aa8.1□□□□□ -1.11
SSX2IP-208ENST00000490476 SOWAHDA6NJG2 315 aa8.09□□□□□ -1.11
SSX2IP-208ENST00000490476 GRM5P41594 1212 aa8.09□□□□□ -1.11
SSX2IP-208ENST00000490476 OCLNQ16625 522 aa8.09□□□□□ -1.11
SSX2IP-208ENST00000490476 SERTAD1Q9UHV2 236 aa8.09□□□□□ -1.11
SSX2IP-208ENST00000490476 PTPRTO14522 1441 aa8.09□□□□□ -1.11
SSX2IP-208ENST00000490476 PREX1Q8TCU6 1659 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 GRIN2AQ12879 1464 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 ZNF784Q8NCA9 323 aaPredicted RBP8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 CDK15Q96Q40 435 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 OSBPL3Q9H4L5 887 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 NUP160Q12769 1436 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 KIAA0586Q9BVV6 1533 aa8.08□□□□□ -1.12
SSX2IP-208ENST00000490476 PRG4Q92954 1404 aaPredicted RBP8.07□□□□□ -1.12
SSX2IP-208ENST00000490476 GDF10P55107 478 aa8.07□□□□□ -1.12
SSX2IP-208ENST00000490476 ZNF211Q13398 564 aaPredicted RBP8.07□□□□□ -1.12
SSX2IP-208ENST00000490476 TNS4Q8IZW8 715 aa8.07□□□□□ -1.12
SSX2IP-208ENST00000490476 YEATS2Q9ULM3 1422 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 TMEM229AB2RXF0 380 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 UBAP1LF5GYI3 381 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 ADH1CP00326 375 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 SLC19A1P41440 591 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 TAS1R3Q7RTX0 852 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 CCDC116Q8IYX3 515 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 C1orf216Q8TAB5 229 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 EMID1Q96A84 441 aaPredicted RBP8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 MRGPRX2Q96LB1 330 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
SSX2IP-208ENST00000490476 SOGA1O94964 1423 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms