RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 USP17L19D6RCP7 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L20D6RJB6 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 PTGIRP43119 386 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 PTSQ03393 145 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L24Q0WX57 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 LARP1Q6PKG0 1096 aaKnown RBP8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 TPCN2Q8NHX9 752 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 POLMQ9NP87 494 aaPredicted RBP8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 A0A1W2PRU2 124 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 MEN1O00255 615 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 ATP1A2P50993 1020 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 SCNN1DP51172 638 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 PTK7Q13308 1070 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 ETNK1Q9HBU6 452 aa8.69□□□□□ -1.02
PRPF4B-207ENST00000490399 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 GDF10P55107 478 aa8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 DPYDQ12882 1025 aa8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
PRPF4B-207ENST00000490399 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 LGR5O75473 907 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 DKK1O94907 266 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 GNRH1P01148 92 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 IL2RAP01589 272 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 ZMIZ1Q9ULJ6 1067 aa8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
PRPF4B-207ENST00000490399 PPP1R15AO75807 674 aaPredicted RBP8.66□□□□□ -1.02
PRPF4B-207ENST00000490399 ATG7O95352 703 aa8.66□□□□□ -1.02
PRPF4B-207ENST00000490399 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
PRPF4B-207ENST00000490399 STK32AQ8WU08 396 aa8.66□□□□□ -1.02
PRPF4B-207ENST00000490399 CNKSR1Q969H4 720 aa8.66□□□□□ -1.02
PRPF4B-207ENST00000490399 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 INHAP05111 366 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 SIX5Q8N196 739 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 ZSCAN1Q8NBB4 408 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 ARXQ96QS3 562 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 ZNF358Q9NW07 568 aa8.65□□□□□ -1.02
PRPF4B-207ENST00000490399 CLN3Q13286 438 aa8.64□□□□□ -1.03
PRPF4B-207ENST00000490399 SLC35F4A4IF30 521 aa8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 GPR161Q8N6U8 529 aaKnown RBP8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 TSEN2Q8NCE0 465 aaKnown RBP8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 FAM200AQ8TCP9 573 aa8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 XAGE2Q96GT9 111 aa8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 ESYT1Q9BSJ8 1104 aa8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
PRPF4B-207ENST00000490399 SEC13P55735 322 aa8.62□□□□□ -1.03
PRPF4B-207ENST00000490399 CENPCQ03188 943 aa8.62□□□□□ -1.03
PRPF4B-207ENST00000490399 TMEM164Q5U3C3 297 aa8.62□□□□□ -1.03
PRPF4B-207ENST00000490399 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
PRPF4B-207ENST00000490399 SENP3-EIF4A1A0A087X0R7 540 aa8.61□□□□□ -1.03
PRPF4B-207ENST00000490399 RETREG2Q8NC44 543 aa8.61□□□□□ -1.03
PRPF4B-207ENST00000490399 GAS2L2Q8NHY3 880 aa8.61□□□□□ -1.03
PRPF4B-207ENST00000490399 HRH3Q9Y5N1 445 aa8.61□□□□□ -1.03
PRPF4B-207ENST00000490399 WASLO00401 505 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-207ENST00000490399 ITGA6P23229 1130 aa8.6□□□□□ -1.03
PRPF4B-207ENST00000490399 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-207ENST00000490399 TLR1Q15399 786 aa8.6□□□□□ -1.03
PRPF4B-207ENST00000490399 TBCELQ5QJ74 424 aa8.6□□□□□ -1.03
PRPF4B-207ENST00000490399 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
PRPF4B-207ENST00000490399 CDC14CA4D256 554 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 SMTNP53814 917 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 KRT76Q01546 638 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 LYSMD3Q7Z3D4 306 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 PRICKLE2Q7Z3G6 844 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 USP3Q9Y6I4 520 aa8.59□□□□□ -1.03
PRPF4B-207ENST00000490399 FAM181BA6NEQ2 426 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 A6NJY4 79 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 BACH1O14867 736 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 RHOQP17081 205 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 FAM69CQ0P6D2 419 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
PRPF4B-207ENST00000490399 EPHA4P54764 986 aa8.57□□□□□ -1.04
PRPF4B-207ENST00000490399 VWA5B2Q8N398 1253 aa8.57□□□□□ -1.04
PRPF4B-207ENST00000490399 NANOS1Q8WY41 292 aaKnown RBP8.57□□□□□ -1.04
PRPF4B-207ENST00000490399 ZSCAN10Q96SZ4 725 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-207ENST00000490399 GRIP2Q9C0E4 1043 aa8.57□□□□□ -1.04
PRPF4B-207ENST00000490399 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
PRPF4B-207ENST00000490399 TMEM214Q6NUQ4 689 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-207ENST00000490399 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
PRPF4B-207ENST00000490399 COL25A1Q9BXS0 654 aaPredicted RBP8.56□□□□□ -1.04
PRPF4B-207ENST00000490399 TSPAN10Q9H1Z9 355 aaPredicted RBP8.56□□□□□ -1.04
PRPF4B-207ENST00000490399 SLAIN2Q9P270 581 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms