RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TK2O00142 265 aa10.74□□□□□ -0.69
PDLIM1-203ENST00000490391 HRO43593 1189 aa10.74□□□□□ -0.69
PDLIM1-203ENST00000490391 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
PDLIM1-203ENST00000490391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1-203ENST00000490391 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1-203ENST00000490391 COL18A1P39060 1754 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 C2orf72A6NCS6 295 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 TUBGCP6Q96RT7 1819 aa10.72□□□□□ -0.69
PDLIM1-203ENST00000490391 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 GCP02774 474 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 PRELPP51888 382 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 NLRP6P59044 892 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 NUDT16Q96DE0 195 aaKnown RBP10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
PDLIM1-203ENST00000490391 BTAF1O14981 1849 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 ACEP12821 1306 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 POLD1P28340 1107 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 APLP1P51693 650 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 ABTB2Q8N961 1025 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 CDCA7Q9BWT1 371 aaPredicted RBP10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
PDLIM1-203ENST00000490391 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 WDR17Q8IZU2 1322 aa10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 ZNF526Q8TF50 670 aaPredicted RBP10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
PDLIM1-203ENST00000490391 SLIT3O75094 1523 aa10.68□□□□□ -0.7
PDLIM1-203ENST00000490391 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
PDLIM1-203ENST00000490391 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
PDLIM1-203ENST00000490391 BRD4O60885 1362 aaPredicted RBP10.67□□□□□ -0.7
PDLIM1-203ENST00000490391 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
PDLIM1-203ENST00000490391 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
PDLIM1-203ENST00000490391 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 NLRP13Q86W25 1043 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 TNS4Q8IZW8 715 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 JMYQ8N9B5 988 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 ABCC6O95255 1503 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 USP6P35125 1406 aa10.66□□□□□ -0.7
PDLIM1-203ENST00000490391 RGPD5Q99666 1765 aa10.65□□□□□ -0.7
PDLIM1-203ENST00000490391 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.7
PDLIM1-203ENST00000490391 EXOC5O00471 708 aa10.64□□□□□ -0.71
PDLIM1-203ENST00000490391 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
PDLIM1-203ENST00000490391 KAT6BQ8WYB5 2073 aa10.64□□□□□ -0.71
PDLIM1-203ENST00000490391 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 PSEN2P49810 448 aa10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
PDLIM1-203ENST00000490391 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
PDLIM1-203ENST00000490391 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
PDLIM1-203ENST00000490391 PIK3C2AO00443 1686 aa10.62□□□□□ -0.71
PDLIM1-203ENST00000490391 TOMM70O94826 608 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 SLC27A3Q5K4L6 730 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 MPHOSPH9Q99550 1183 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 CICQ96RK0 1608 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1-203ENST00000490391 HTRA3P83110 453 aa10.6□□□□□ -0.71
PDLIM1-203ENST00000490391 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
PDLIM1-203ENST00000490391 CD2APQ9Y5K6 639 aa10.6□□□□□ -0.71
PDLIM1-203ENST00000490391 LY75O60449 1722 aa10.59□□□□□ -0.71
PDLIM1-203ENST00000490391 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
PDLIM1-203ENST00000490391 KCNQ4P56696 695 aa10.58□□□□□ -0.72
PDLIM1-203ENST00000490391 NFAT5O94916 1531 aa10.58□□□□□ -0.72
PDLIM1-203ENST00000490391 PTPN5P54829 565 aa10.57□□□□□ -0.72
PDLIM1-203ENST00000490391 COL23A1Q86Y22 540 aaPredicted RBP10.57□□□□□ -0.72
PDLIM1-203ENST00000490391 CSB-PGBD3P0DP91 1061 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 PPARGC1BQ86YN6 1023 aaKnown RBP10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
PDLIM1-203ENST00000490391 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
PDLIM1-203ENST00000490391 NSD2O96028 1365 aa10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
PDLIM1-203ENST00000490391 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
PDLIM1-203ENST00000490391 IL2RBP14784 551 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
PDLIM1-203ENST00000490391 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
PDLIM1-203ENST00000490391 ANKRD36BQ8N2N9 1353 aa10.51□□□□□ -0.73
PDLIM1-203ENST00000490391 KIAA1551Q9HCM1 1747 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 TOGARAM1Q9Y4F4 1720 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 HSPA1AP0DMV8 641 aaKnown RBP10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 HSPA1BP0DMV9 641 aaKnown RBP10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 FSTL1Q12841 308 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
PDLIM1-203ENST00000490391 SRPK2P78362 688 aaKnown RBP10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 C5P01031 1676 aa10.49□□□□□ -0.73
PDLIM1-203ENST00000490391 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms