RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PRMT3O60678 531 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 EIF5BO60841 1220 aaKnown RBP4.43□□□□□ -1.7
UBXN4-208ENST00000490163 NUDT7P0C024 238 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 SOX9P48436 509 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 ZNF654Q8IZM8 581 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 RNF34Q969K3 372 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 XAGE2Q96GT9 111 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 ZNF358Q9NW07 568 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 CAPNS1P04632 268 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 MMRN1Q13201 1228 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 C4orf48Q5BLP8 95 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 FAM26DQ5JW98 314 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 JAZF1Q86VZ6 243 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 C11orf16Q9NQ32 467 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 RIPOR2Q9Y4F9 1068 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 EMILIN1Q9Y6C2 1016 aa4.43□□□□□ -1.7
UBXN4-208ENST00000490163 CFHP08603 1231 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 SCNN1AP37088 669 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 KIAA0907Q7Z7F0 614 aaPredicted RBP4.42□□□□□ -1.7
UBXN4-208ENST00000490163 STAG1Q8WVM7 1258 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 CDK15Q96Q40 435 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 ZNF700Q9H0M5 742 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 PRKAB1Q9Y478 270 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 SEC16BQ96JE7 1060 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 PRR14Q9BWN1 585 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 CCDC113Q9H0I3 377 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 MAGEC2Q9UBF1 373 aaPredicted RBP4.42□□□□□ -1.7
UBXN4-208ENST00000490163 H3BRB1 525 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 GARTP22102 1010 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 MAPK1P28482 360 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 FBXO41Q8TF61 875 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 OSBPL2Q9H1P3 480 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 TUT1Q9H6E5 874 aaKnown RBP4.42□□□□□ -1.7
UBXN4-208ENST00000490163 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.42□□□□□ -1.7
UBXN4-208ENST00000490163 DCAF1Q9Y4B6 1507 aa4.42□□□□□ -1.7
UBXN4-208ENST00000490163 CSPP1Q1MSJ5 1256 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 PROX2Q3B8N5 592 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 BLOC1S3Q6QNY0 202 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 KRT26Q7Z3Y9 468 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 SYMPKQ92797 1274 aaKnown RBP4.41□□□□□ -1.7
UBXN4-208ENST00000490163 PRKAG2Q9UGJ0 569 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 MYO15BQ96JP2 1530 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 ARHGAP33O14559 1287 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 PLCB3Q01970 1234 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 SLFNL1Q499Z3 407 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 CCDC102BQ68D86 513 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 CAPN12Q6ZSI9 719 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 RDH13Q8NBN7 331 aa4.41□□□□□ -1.7
UBXN4-208ENST00000490163 NOP58Q9Y2X3 529 aaKnown RBP4.41□□□□□ -1.7
UBXN4-208ENST00000490163 ANKRD62A6NC57 917 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 VEGFBP49765 207 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 GTF2IP78347 998 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 RNPC3Q96LT9 517 aaKnown RBP4.4□□□□□ -1.7
UBXN4-208ENST00000490163 RSRP1Q9BUV0 290 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 CCNYL3P0C7X3 344 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 ATF4P18848 351 aaPredicted RBP4.4□□□□□ -1.7
UBXN4-208ENST00000490163 GNA15P30679 374 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 RNF19BQ6ZMZ0 732 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 LRCH3Q96II8 777 aa4.4□□□□□ -1.7
UBXN4-208ENST00000490163 CDK2AP1O14519 115 aa4.4□□□□□ -1.71
UBXN4-208ENST00000490163 EIF3JO75822 258 aaKnown RBP4.4□□□□□ -1.71
UBXN4-208ENST00000490163 COX20Q5RI15 118 aa4.4□□□□□ -1.71
UBXN4-208ENST00000490163 ALKBH2Q6NS38 261 aa4.4□□□□□ -1.71
UBXN4-208ENST00000490163 NT5DC4Q86YG4 428 aa4.4□□□□□ -1.71
UBXN4-208ENST00000490163 SIRPGQ9P1W8 387 aa4.4□□□□□ -1.71
UBXN4-208ENST00000490163 SEPT3Q9UH03 358 aa4.4□□□□□ -1.71
UBXN4-208ENST00000490163 TMA7Q9Y2S6 64 aaKnown RBP4.4□□□□□ -1.71
UBXN4-208ENST00000490163 GPC6Q9Y625 555 aaPredicted RBP4.4□□□□□ -1.71
UBXN4-208ENST00000490163 SFI1A8K8P3 1242 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 NBPF14Q5TI25 921 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 C1orf53Q5VUE5 145 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 CRELD1Q96HD1 420 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 DMGDHQ9UI17 866 aaKnown RBP4.39□□□□□ -1.71
UBXN4-208ENST00000490163 GREM1O60565 184 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 COL9A2Q14055 689 aaPredicted RBP4.39□□□□□ -1.71
UBXN4-208ENST00000490163 TEAD4Q15561 434 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 PTPROQ16827 1216 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 PLEKHG6Q3KR16 790 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 C3orf67Q6ZVT6 689 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 RNF19AQ9NV58 838 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 MAP10Q9P2G4 905 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 LOC102724159A0A0B4J2E5 919 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 C6orf229H3BNL8 230 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 PWP2Q15269 919 aaKnown RBP4.39□□□□□ -1.71
UBXN4-208ENST00000490163 RBBP8NLQ8NC74 664 aaPredicted RBP4.39□□□□□ -1.71
UBXN4-208ENST00000490163 CSRNP1Q96S65 589 aa4.39□□□□□ -1.71
UBXN4-208ENST00000490163 FMNL1O95466 1100 aaPredicted RBP4.38□□□□□ -1.71
UBXN4-208ENST00000490163 RASA3Q14644 834 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 SPNS2Q8IVW8 549 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 ADAM32Q8TC27 787 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 LRRC3Q9BY71 257 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 ACBD3Q9H3P7 528 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 C12orf49Q9H741 205 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 TMEM260Q9NX78 707 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 DOLKQ9UPQ8 538 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 HOXD8P13378 290 aaPredicted RBP4.38□□□□□ -1.71
UBXN4-208ENST00000490163 PTCRAQ6ISU1 281 aaPredicted RBP4.38□□□□□ -1.71
UBXN4-208ENST00000490163 PPME1Q9Y570 386 aa4.38□□□□□ -1.71
UBXN4-208ENST00000490163 MARCH6O60337 910 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms