RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
GTF3C5-210ENST00000489842 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.412e-8■□□□□ 8.6
GTF3C5-210ENST00000489842 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
GTF3C5-210ENST00000489842 SMARCC1Q92922 1105 aaPredicted RBP12.47□□□□□ -0.41
GTF3C5-210ENST00000489842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.41
GTF3C5-210ENST00000489842 GNPATO15228 680 aa12.46□□□□□ -0.41
GTF3C5-210ENST00000489842 IL13P35225 146 aa12.46□□□□□ -0.41
GTF3C5-210ENST00000489842 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
GTF3C5-210ENST00000489842 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
GTF3C5-210ENST00000489842 PER1O15534 1290 aaPredicted RBP12.45□□□□□ -0.42
GTF3C5-210ENST00000489842 HMOX1P09601 288 aa12.45□□□□□ -0.42
GTF3C5-210ENST00000489842 MTHFSP49914 203 aa12.45□□□□□ -0.42
GTF3C5-210ENST00000489842 PLEKHO1Q53GL0 409 aaPredicted RBP12.44□□□□□ -0.42
GTF3C5-210ENST00000489842 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
GTF3C5-210ENST00000489842 KDRP35968 1356 aa12.43□□□□□ -0.42
GTF3C5-210ENST00000489842 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
GTF3C5-210ENST00000489842 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
GTF3C5-210ENST00000489842 CABP4P57796 275 aa12.43□□□□□ -0.42
GTF3C5-210ENST00000489842 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
GTF3C5-210ENST00000489842 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
GTF3C5-210ENST00000489842 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
GTF3C5-210ENST00000489842 SCN11AQ9UI33 1791 aa12.42□□□□□ -0.42
GTF3C5-210ENST00000489842 TJP1Q07157 1748 aa12.42□□□□□ -0.42
GTF3C5-210ENST00000489842 ERVV-2B6SEH9 535 aa12.41□□□□□ -0.42
GTF3C5-210ENST00000489842 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
GTF3C5-210ENST00000489842 C4AP0C0L4 1744 aa12.4□□□□□ -0.42
GTF3C5-210ENST00000489842 SSFA2P28290 1259 aa12.4□□□□□ -0.42
GTF3C5-210ENST00000489842 FLAD1Q8NFF5 587 aa12.4□□□□□ -0.42
GTF3C5-210ENST00000489842 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 SLC39A6Q13433 755 aa12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 C1orf141Q5JVX7 400 aa12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 ARHGEF1Q92888 912 aaKnown RBP12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
GTF3C5-210ENST00000489842 KIAA1551Q9HCM1 1747 aa12.38□□□□□ -0.43
GTF3C5-210ENST00000489842 HSP90AB1P08238 724 aaKnown RBP12.38□□□□□ -0.43
GTF3C5-210ENST00000489842 MMP10P09238 476 aa12.38□□□□□ -0.43
GTF3C5-210ENST00000489842 COL3A1P02461 1466 aaPredicted RBP12.38□□□□□ -0.43
GTF3C5-210ENST00000489842 CICQ96RK0 1608 aaPredicted RBP12.37□□□□□ -0.43
GTF3C5-210ENST00000489842 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
GTF3C5-210ENST00000489842 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
GTF3C5-210ENST00000489842 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 U2SURPO15042 1029 aaKnown RBP12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 TRAPPC3LQ5T215 181 aa12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
GTF3C5-210ENST00000489842 RPS6KA4O75676 772 aa12.35□□□□□ -0.43
GTF3C5-210ENST00000489842 GYS1P13807 737 aa12.35□□□□□ -0.43
GTF3C5-210ENST00000489842 INTS5Q6P9B9 1019 aaKnown RBP12.35□□□□□ -0.43
GTF3C5-210ENST00000489842 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
GTF3C5-210ENST00000489842 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
GTF3C5-210ENST00000489842 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
GTF3C5-210ENST00000489842 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
GTF3C5-210ENST00000489842 FKBP8Q14318 412 aa12.34□□□□□ -0.43
GTF3C5-210ENST00000489842 RC3H1Q5TC82 1133 aaKnown RBP12.34□□□□□ -0.43
GTF3C5-210ENST00000489842 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
GTF3C5-210ENST00000489842 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
GTF3C5-210ENST00000489842 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
GTF3C5-210ENST00000489842 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
GTF3C5-210ENST00000489842 RFC4P35249 363 aa12.33□□□□□ -0.44
GTF3C5-210ENST00000489842 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
GTF3C5-210ENST00000489842 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
GTF3C5-210ENST00000489842 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
GTF3C5-210ENST00000489842 DDR1Q08345 913 aa12.32□□□□□ -0.44
GTF3C5-210ENST00000489842 PHACTR3Q96KR7 559 aa12.32□□□□□ -0.44
GTF3C5-210ENST00000489842 MRC1P22897 1456 aa12.32□□□□□ -0.44
GTF3C5-210ENST00000489842 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
GTF3C5-210ENST00000489842 DPEP1P16444 411 aa12.31□□□□□ -0.44
GTF3C5-210ENST00000489842 C1QTNF8P60827 252 aa12.31□□□□□ -0.44
GTF3C5-210ENST00000489842 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
GTF3C5-210ENST00000489842 ZBTB1Q9Y2K1 713 aa12.31□□□□□ -0.44
GTF3C5-210ENST00000489842 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
GTF3C5-210ENST00000489842 KCNQ3O43525 872 aa12.3□□□□□ -0.44
GTF3C5-210ENST00000489842 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
GTF3C5-210ENST00000489842 SIPA1L3O60292 1781 aaPredicted RBP12.3□□□□□ -0.44
GTF3C5-210ENST00000489842 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
GTF3C5-210ENST00000489842 NLGN1Q8N2Q7 840 aa12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 BCS1LQ9Y276 419 aa12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 PARP3Q9Y6F1 533 aa12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 SOS1Q07889 1333 aaPredicted RBP12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 USP42Q9H9J4 1324 aaKnown RBP12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 NPC1L1Q9UHC9 1359 aa12.29□□□□□ -0.44
GTF3C5-210ENST00000489842 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 ADRA2BP18089 450 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 KCNA3P22001 575 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 CANXP27824 592 aaKnown RBP12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 PPP2R1AP30153 589 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 CHRNA5P30532 468 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 BCL2L12Q9HB09 334 aa12.28□□□□□ -0.44
GTF3C5-210ENST00000489842 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
GTF3C5-210ENST00000489842 PIP4K2AP48426 406 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms