RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 PDIA4P13667 645 aaKnown RBP10.54□□□□□ -0.72
VPS26A-206ENST00000489794 GPC1P35052 558 aa10.54□□□□□ -0.72
VPS26A-206ENST00000489794 RELBQ01201 579 aa10.54□□□□□ -0.72
VPS26A-206ENST00000489794 TMEM164Q5U3C3 297 aa10.54□□□□□ -0.72
VPS26A-206ENST00000489794 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
VPS26A-206ENST00000489794 MRPL14Q6P1L8 145 aaKnown RBP10.54□□□□□ -0.72
VPS26A-206ENST00000489794 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-206ENST00000489794 STK32AQ8WU08 396 aa10.54□□□□□ -0.72
VPS26A-206ENST00000489794 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
VPS26A-206ENST00000489794 SPINT1O43278 529 aa10.53□□□□□ -0.72
VPS26A-206ENST00000489794 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.53□□□□□ -0.72
VPS26A-206ENST00000489794 AGBL1Q96MI9 1066 aa10.53□□□□□ -0.72
VPS26A-206ENST00000489794 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
VPS26A-206ENST00000489794 SFI1A8K8P3 1242 aa10.52□□□□□ -0.73
VPS26A-206ENST00000489794 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
VPS26A-206ENST00000489794 CLP1Q92989 425 aaKnown RBP10.52□□□□□ -0.73
VPS26A-206ENST00000489794 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
VPS26A-206ENST00000489794 TMEM88BA6NKF7 163 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 MEN1O00255 615 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 IL2RAP01589 272 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 SMTNP53814 917 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 RAB6BQ9NRW1 208 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 HRH3Q9Y5N1 445 aa10.51□□□□□ -0.73
VPS26A-206ENST00000489794 C11orf95C9JLR9 678 aaPredicted RBP10.5□□□□□ -0.73
VPS26A-206ENST00000489794 BMP2P12643 396 aa10.5□□□□□ -0.73
VPS26A-206ENST00000489794 MTFR1Q15390 333 aa10.5□□□□□ -0.73
VPS26A-206ENST00000489794 TLR1Q15399 786 aa10.5□□□□□ -0.73
VPS26A-206ENST00000489794 GAS2L2Q8NHY3 880 aa10.5□□□□□ -0.73
VPS26A-206ENST00000489794 HINFPQ9BQA5 517 aa10.5□□□□□ -0.73
VPS26A-206ENST00000489794 ZNF395Q9H8N7 513 aaPredicted RBP10.5□□□□□ -0.73
VPS26A-206ENST00000489794 GMPR2Q9P2T1 348 aaKnown RBP10.5□□□□□ -0.73
VPS26A-206ENST00000489794 A6NJY4 79 aa10.49□□□□□ -0.73
VPS26A-206ENST00000489794 RNF144AP50876 292 aaPredicted RBP10.49□□□□□ -0.73
VPS26A-206ENST00000489794 SERTAD1Q9UHV2 236 aa10.49□□□□□ -0.73
VPS26A-206ENST00000489794 CENPCQ03188 943 aa10.48□□□□□ -0.73
VPS26A-206ENST00000489794 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
VPS26A-206ENST00000489794 CDK2AP1O14519 115 aa10.47□□□□□ -0.73
VPS26A-206ENST00000489794 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
VPS26A-206ENST00000489794 ZSCAN10Q96SZ4 725 aaPredicted RBP10.47□□□□□ -0.73
VPS26A-206ENST00000489794 POLMQ9NP87 494 aaPredicted RBP10.47□□□□□ -0.73
VPS26A-206ENST00000489794 ATP13A2Q9NQ11 1180 aa10.47□□□□□ -0.73
VPS26A-206ENST00000489794 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
VPS26A-206ENST00000489794 STAU1O95793 577 aaKnown RBP10.46□□□□□ -0.73
VPS26A-206ENST00000489794 EPHA4P54764 986 aa10.46□□□□□ -0.73
VPS26A-206ENST00000489794 SLC27A3Q5K4L6 730 aa10.46□□□□□ -0.73
VPS26A-206ENST00000489794 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.73
VPS26A-206ENST00000489794 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
VPS26A-206ENST00000489794 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
VPS26A-206ENST00000489794 SCHIP1Q9P0W5 487 aaPredicted RBP10.46□□□□□ -0.73
VPS26A-206ENST00000489794 CHMP3Q9Y3E7 222 aa10.46□□□□□ -0.73
VPS26A-206ENST00000489794 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
VPS26A-206ENST00000489794 FHDC1Q9C0D6 1143 aaPredicted RBP10.45□□□□□ -0.74
VPS26A-206ENST00000489794 TTLL8A6PVC2 850 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 BRD1O95696 1058 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 IGFBP4P22692 258 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 WEE1P30291 646 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 FOXK2Q01167 660 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 GNASQ5JWF2 1037 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 TMEM214Q6NUQ4 689 aaKnown RBP10.44□□□□□ -0.74
VPS26A-206ENST00000489794 TREML4Q6UXN2 200 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 TRIM46Q7Z4K8 759 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 PPARGC1BQ86YN6 1023 aaKnown RBP10.44□□□□□ -0.74
VPS26A-206ENST00000489794 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 GRIP2Q9C0E4 1043 aa10.44□□□□□ -0.74
VPS26A-206ENST00000489794 BMP1P13497 986 aa10.43□□□□□ -0.74
VPS26A-206ENST00000489794 ATP2B4P23634 1241 aa10.43□□□□□ -0.74
VPS26A-206ENST00000489794 KCTD17Q8N5Z5 321 aa10.43□□□□□ -0.74
VPS26A-206ENST00000489794 C1orf216Q8TAB5 229 aa10.43□□□□□ -0.74
VPS26A-206ENST00000489794 ZFP42Q96MM3 310 aa10.43□□□□□ -0.74
VPS26A-206ENST00000489794 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
VPS26A-206ENST00000489794 FOXO3O43524 673 aa10.42□□□□□ -0.74
VPS26A-206ENST00000489794 CTSOP43234 321 aaPredicted RBP10.42□□□□□ -0.74
VPS26A-206ENST00000489794 PSMA6P60900 246 aaKnown RBP10.42□□□□□ -0.74
VPS26A-206ENST00000489794 WDR44Q5JSH3 913 aa10.42□□□□□ -0.74
VPS26A-206ENST00000489794 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
VPS26A-206ENST00000489794 RHBDD1Q8TEB9 315 aa10.42□□□□□ -0.74
VPS26A-206ENST00000489794 NIFKQ9BYG3 293 aaKnown RBP10.42□□□□□ -0.74
VPS26A-206ENST00000489794 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.749e-9■■■■■ 67.7
VPS26A-206ENST00000489794 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
VPS26A-206ENST00000489794 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
VPS26A-206ENST00000489794 FOXD4L5Q5VV16 416 aaPredicted RBP10.41□□□□□ -0.74
VPS26A-206ENST00000489794 LYSMD3Q7Z3D4 306 aa10.41□□□□□ -0.74
VPS26A-206ENST00000489794 IQSEC3Q9UPP2 1182 aaPredicted RBP10.41□□□□□ -0.74
VPS26A-206ENST00000489794 MTMR7Q9Y216 660 aa10.41□□□□□ -0.74
VPS26A-206ENST00000489794 PRMT3O60678 531 aa10.4□□□□□ -0.74
VPS26A-206ENST00000489794 SSFA2P28290 1259 aa10.4□□□□□ -0.74
VPS26A-206ENST00000489794 OCLNQ16625 522 aa10.4□□□□□ -0.74
VPS26A-206ENST00000489794 RNF217Q8TC41 542 aa10.4□□□□□ -0.74
VPS26A-206ENST00000489794 SCG3Q8WXD2 468 aaKnown RBP10.4□□□□□ -0.74
VPS26A-206ENST00000489794 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
VPS26A-206ENST00000489794 TSPAN10Q9H1Z9 355 aaPredicted RBP10.4□□□□□ -0.74
VPS26A-206ENST00000489794 CXXC1Q9P0U4 656 aaPredicted RBP10.4□□□□□ -0.74
VPS26A-206ENST00000489794 TEAD4Q15561 434 aa10.39□□□□□ -0.75
VPS26A-206ENST00000489794 PPP1R12BO60237 982 aaPredicted RBP10.38□□□□□ -0.75
VPS26A-206ENST00000489794 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
VPS26A-206ENST00000489794 KCNA1Q09470 495 aa10.38□□□□□ -0.75
VPS26A-206ENST00000489794 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms