RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 NPC1L1Q9UHC9 1359 aa32.86■■■□□ 2.85
COPS9-203ENST00000489698 PELP1Q8IZL8 1130 aaKnown RBP32.86■■■□□ 2.85
COPS9-203ENST00000489698 ATG3Q9NT62 314 aa32.86■■■□□ 2.85
COPS9-203ENST00000489698 DIAPH1O60610 1272 aaKnown RBP32.85■■■□□ 2.85
COPS9-203ENST00000489698 HMOX1P09601 288 aa32.85■■■□□ 2.85
COPS9-203ENST00000489698 SENP3-EIF4A1A0A087X0R7 540 aa32.84■■■□□ 2.85
COPS9-203ENST00000489698 C4BP0C0L5 1744 aa32.84■■■□□ 2.85
COPS9-203ENST00000489698 ATP6V1AP38606 617 aa32.83■■■□□ 2.85
COPS9-203ENST00000489698 CABP4P57796 275 aa32.83■■■□□ 2.85
COPS9-203ENST00000489698 C1QTNF8P60827 252 aa32.83■■■□□ 2.85
COPS9-203ENST00000489698 FLAD1Q8NFF5 587 aa32.82■■■□□ 2.84
COPS9-203ENST00000489698 KDM6AO15550 1401 aaPredicted RBP32.82■■■□□ 2.84
COPS9-203ENST00000489698 GOLGB1Q14789 3259 aaKnown RBP32.81■■■□□ 2.84
COPS9-203ENST00000489698 MSL1Q68DK7 614 aa32.81■■■□□ 2.84
COPS9-203ENST00000489698 LINC00116Q8NCU8 138 aa32.81■■■□□ 2.84
COPS9-203ENST00000489698 PHF14O94880 888 aa32.8■■■□□ 2.84
COPS9-203ENST00000489698 NLGN2Q8NFZ4 835 aa32.8■■■□□ 2.84
COPS9-203ENST00000489698 ITPK1Q13572 414 aa32.79■■■□□ 2.84
COPS9-203ENST00000489698 RBM42Q9BTD8 480 aaKnown RBP32.79■■■□□ 2.84
COPS9-203ENST00000489698 SMIM5Q71RC9 77 aa32.78■■■□□ 2.84
COPS9-203ENST00000489698 AMIGO3Q86WK7 504 aa32.76■■■□□ 2.83
COPS9-203ENST00000489698 U2SURPO15042 1029 aaKnown RBP32.75■■■□□ 2.83
COPS9-203ENST00000489698 NFATC2IPQ8NCF5 419 aa32.75■■■□□ 2.83
COPS9-203ENST00000489698 UBR3Q6ZT12 1888 aa32.74■■■□□ 2.83
COPS9-203ENST00000489698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.74■■■□□ 2.83
COPS9-203ENST00000489698 AKAP4Q5JQC9 854 aa32.74■■■□□ 2.83
COPS9-203ENST00000489698 GNPATO15228 680 aa32.72■■■□□ 2.83
COPS9-203ENST00000489698 GIGYF1O75420 1035 aaPredicted RBP32.71■■■□□ 2.83
COPS9-203ENST00000489698 SLC4A9Q96Q91 983 aa32.71■■■□□ 2.83
COPS9-203ENST00000489698 COL3A1P02461 1466 aaPredicted RBP32.7■■■□□ 2.83
COPS9-203ENST00000489698 SSFA2P28290 1259 aa32.7■■■□□ 2.83
COPS9-203ENST00000489698 SCN11AQ9UI33 1791 aa32.7■■■□□ 2.82
COPS9-203ENST00000489698 PTCD1O75127 700 aaKnown RBP32.69■■■□□ 2.82
COPS9-203ENST00000489698 MTHFSDQ2M296 383 aaKnown RBP32.69■■■□□ 2.82
COPS9-203ENST00000489698 LGR6Q9HBX8 967 aa32.68■■■□□ 2.82
COPS9-203ENST00000489698 YBX3P16989 372 aaKnown RBP eCLIP32.67■■■□□ 2.82
COPS9-203ENST00000489698 CFAP53Q96M91 514 aa32.67■■■□□ 2.82
COPS9-203ENST00000489698 RNMTO43148 476 aaKnown RBP32.64■■■□□ 2.82
COPS9-203ENST00000489698 GRIN3BO60391 1043 aa32.63■■■□□ 2.81
COPS9-203ENST00000489698 SLC52A2Q9HAB3 445 aa32.63■■■□□ 2.81
COPS9-203ENST00000489698 RTCBQ9Y3I0 505 aaKnown RBP32.63■■■□□ 2.81
COPS9-203ENST00000489698 PPP2R1AP30153 589 aa32.62■■■□□ 2.81
COPS9-203ENST00000489698 VIRMAQ69YN4 1812 aaKnown RBP32.62■■■□□ 2.81
COPS9-203ENST00000489698 ZNF831Q5JPB2 1677 aa32.62■■■□□ 2.81
COPS9-203ENST00000489698 TRAPPC3LQ5T215 181 aa32.6■■■□□ 2.81
COPS9-203ENST00000489698 RC3H1Q5TC82 1133 aaKnown RBP32.59■■■□□ 2.81
COPS9-203ENST00000489698 COL5A3P25940 1745 aaPredicted RBP32.59■■■□□ 2.81
COPS9-203ENST00000489698 CNTNAP4Q9C0A0 1308 aa32.58■■■□□ 2.81
COPS9-203ENST00000489698 NUDCQ9Y266 331 aa32.57■■■□□ 2.8
COPS9-203ENST00000489698 SLC39A6Q13433 755 aa32.56■■■□□ 2.8
COPS9-203ENST00000489698 GAS2L2Q8NHY3 880 aa32.55■■■□□ 2.8
COPS9-203ENST00000489698 MYH14Q7Z406 1995 aaKnown RBP32.54■■■□□ 2.8
COPS9-203ENST00000489698 RPS6KA4O75676 772 aa32.54■■■□□ 2.8
COPS9-203ENST00000489698 ARHGEF1Q92888 912 aaKnown RBP32.54■■■□□ 2.8
COPS9-203ENST00000489698 PRKAR2BP31323 418 aa32.53■■■□□ 2.8
COPS9-203ENST00000489698 CRKLP46109 303 aaKnown RBP32.53■■■□□ 2.8
COPS9-203ENST00000489698 CD2APQ9Y5K6 639 aa32.53■■■□□ 2.8
COPS9-203ENST00000489698 MRC1P22897 1456 aa32.53■■■□□ 2.8
COPS9-203ENST00000489698 U2AF1L5P0DN76 240 aaPredicted RBP32.52■■■□□ 2.8
COPS9-203ENST00000489698 RFC4P35249 363 aa32.52■■■□□ 2.8
COPS9-203ENST00000489698 U2AF1Q01081 240 aaKnown RBP eCLIP32.52■■■□□ 2.8
COPS9-203ENST00000489698 GNAT3A8MTJ3 354 aa32.51■■■□□ 2.79
COPS9-203ENST00000489698 ADRA2BP18089 450 aa32.51■■■□□ 2.79
COPS9-203ENST00000489698 TJP1Q07157 1748 aa32.51■■■□□ 2.79
COPS9-203ENST00000489698 ATP10DQ9P241 1426 aa32.51■■■□□ 2.79
COPS9-203ENST00000489698 DNAJC10Q8IXB1 793 aa32.5■■■□□ 2.79
COPS9-203ENST00000489698 RSPH6AQ9H0K4 717 aa32.5■■■□□ 2.79
COPS9-203ENST00000489698 ADAMTS7Q9UKP4 1686 aa32.5■■■□□ 2.79
COPS9-203ENST00000489698 PHACTR3Q96KR7 559 aa32.49■■■□□ 2.79
COPS9-203ENST00000489698 MMP10P09238 476 aa32.48■■■□□ 2.79
COPS9-203ENST00000489698 IL17REQ8NFR9 667 aa32.48■■■□□ 2.79
COPS9-203ENST00000489698 TEFQ10587 303 aa32.47■■■□□ 2.79
COPS9-203ENST00000489698 NLGN1Q8N2Q7 840 aa32.47■■■□□ 2.79
COPS9-203ENST00000489698 INTS5Q6P9B9 1019 aaKnown RBP32.44■■■□□ 2.78
COPS9-203ENST00000489698 TTC5Q8N0Z6 440 aa32.44■■■□□ 2.78
COPS9-203ENST00000489698 GYS1P13807 737 aa32.43■■■□□ 2.78
COPS9-203ENST00000489698 CICQ96RK0 1608 aaPredicted RBP32.43■■■□□ 2.78
COPS9-203ENST00000489698 CEP350Q5VT06 3117 aa32.43■■■□□ 2.78
COPS9-203ENST00000489698 KCPQ6ZWJ8 1503 aa32.42■■■□□ 2.78
COPS9-203ENST00000489698 CCDC87Q9NVE4 849 aa32.42■■■□□ 2.78
COPS9-203ENST00000489698 C4AP0C0L4 1744 aa32.42■■■□□ 2.78
COPS9-203ENST00000489698 FCHSD2O94868 740 aa32.41■■■□□ 2.78
COPS9-203ENST00000489698 SRP68Q9UHB9 627 aaKnown RBP32.41■■■□□ 2.78
COPS9-203ENST00000489698 WWC3Q9ULE0 1092 aa32.41■■■□□ 2.78
COPS9-203ENST00000489698 CYP19A1P11511 503 aaPredicted RBP32.4■■■□□ 2.78
COPS9-203ENST00000489698 GPBP1L1Q9HC44 474 aaPredicted RBP32.4■■■□□ 2.78
COPS9-203ENST00000489698 ADCY9O60503 1353 aa32.38■■■□□ 2.77
COPS9-203ENST00000489698 VSIG10Q8N0Z9 540 aa32.38■■■□□ 2.77
COPS9-203ENST00000489698 ZNF526Q8TF50 670 aaPredicted RBP32.37■■■□□ 2.77
COPS9-203ENST00000489698 PARP3Q9Y6F1 533 aa32.37■■■□□ 2.77
COPS9-203ENST00000489698 ZNF790Q6PG37 636 aa32.36■■■□□ 2.77
COPS9-203ENST00000489698 RTF1Q92541 710 aaKnown RBP32.36■■■□□ 2.77
COPS9-203ENST00000489698 UBR2Q8IWV8 1755 aa32.36■■■□□ 2.77
COPS9-203ENST00000489698 USP42Q9H9J4 1324 aaKnown RBP32.35■■■□□ 2.77
COPS9-203ENST00000489698 DDX10Q13206 875 aaKnown RBP32.35■■■□□ 2.77
COPS9-203ENST00000489698 SIPA1L3O60292 1781 aaPredicted RBP32.35■■■□□ 2.77
COPS9-203ENST00000489698 FKBP8Q14318 412 aa32.34■■■□□ 2.77
COPS9-203ENST00000489698 ZNF496Q96IT1 587 aaPredicted RBP32.34■■■□□ 2.77
COPS9-203ENST00000489698 ZBTB1Q9Y2K1 713 aa32.34■■■□□ 2.77
COPS9-203ENST00000489698 CEMIPQ8WUJ3 1361 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms