RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ADCY9O60503 1353 aa23.45■■□□□ 1.34
TOP3B-217ENST00000489581 EIF4A2Q14240 407 aaKnown RBP23.45■■□□□ 1.34
TOP3B-217ENST00000489581 MMP10P09238 476 aa23.41■■□□□ 1.34
TOP3B-217ENST00000489581 RBM42Q9BTD8 480 aaKnown RBP23.4■■□□□ 1.34
TOP3B-217ENST00000489581 SLC4A9Q96Q91 983 aa23.39■■□□□ 1.33
TOP3B-217ENST00000489581 RTCBQ9Y3I0 505 aaKnown RBP23.39■■□□□ 1.33
TOP3B-217ENST00000489581 N4BP2Q86UW6 1770 aaPredicted RBP23.39■■□□□ 1.33
TOP3B-217ENST00000489581 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
TOP3B-217ENST00000489581 TIMELESSQ9UNS1 1208 aa23.38■■□□□ 1.33
TOP3B-217ENST00000489581 ERVV-2B6SEH9 535 aa23.37■■□□□ 1.33
TOP3B-217ENST00000489581 KIF13BQ9NQT8 1826 aa23.37■■□□□ 1.33
TOP3B-217ENST00000489581 KDRP35968 1356 aa23.37■■□□□ 1.33
TOP3B-217ENST00000489581 MYH14Q7Z406 1995 aaKnown RBP23.35■■□□□ 1.33
TOP3B-217ENST00000489581 HSPA6P17066 643 aa23.35■■□□□ 1.33
TOP3B-217ENST00000489581 ARHGEF1Q92888 912 aaKnown RBP23.35■■□□□ 1.33
TOP3B-217ENST00000489581 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
TOP3B-217ENST00000489581 CICQ96RK0 1608 aaPredicted RBP23.34■■□□□ 1.33
TOP3B-217ENST00000489581 KIAA1551Q9HCM1 1747 aa23.34■■□□□ 1.33
TOP3B-217ENST00000489581 A0A0G2JLW4 131 aa23.34■■□□□ 1.33
TOP3B-217ENST00000489581 HSP90AB1P08238 724 aaKnown RBP23.34■■□□□ 1.33
TOP3B-217ENST00000489581 PLEKHO1Q53GL0 409 aaPredicted RBP23.34■■□□□ 1.33
TOP3B-217ENST00000489581 NLGN1Q8N2Q7 840 aa23.34■■□□□ 1.33
TOP3B-217ENST00000489581 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
TOP3B-217ENST00000489581 COL5A3P25940 1745 aaPredicted RBP23.33■■□□□ 1.33
TOP3B-217ENST00000489581 ZNF831Q5JPB2 1677 aa23.33■■□□□ 1.33
TOP3B-217ENST00000489581 RC3H1Q5TC82 1133 aaKnown RBP23.33■■□□□ 1.33
TOP3B-217ENST00000489581 ZNF530Q6P9A1 599 aaPredicted RBP23.33■■□□□ 1.33
TOP3B-217ENST00000489581 BCS1LQ9Y276 419 aa23.33■■□□□ 1.33
TOP3B-217ENST00000489581 PLEKHG2Q9H7P9 1386 aa23.32■■□□□ 1.32
TOP3B-217ENST00000489581 CABP4P57796 275 aa23.32■■□□□ 1.32
TOP3B-217ENST00000489581 TGFB2P61812 414 aa23.32■■□□□ 1.32
TOP3B-217ENST00000489581 PANK3Q9H999 370 aa23.32■■□□□ 1.32
TOP3B-217ENST00000489581 KIF3CO14782 793 aa23.31■■□□□ 1.32
TOP3B-217ENST00000489581 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
TOP3B-217ENST00000489581 GYS1P13807 737 aa23.31■■□□□ 1.32
TOP3B-217ENST00000489581 RFC4P35249 363 aa23.31■■□□□ 1.32
TOP3B-217ENST00000489581 KDM6AO15550 1401 aaPredicted RBP23.31■■□□□ 1.32
TOP3B-217ENST00000489581 ADRA2BP18089 450 aa23.3■■□□□ 1.32
TOP3B-217ENST00000489581 IFFO2Q5TF58 517 aa23.3■■□□□ 1.32
TOP3B-217ENST00000489581 CNTNAP4Q9C0A0 1308 aa23.3■■□□□ 1.32
TOP3B-217ENST00000489581 PTCD1O75127 700 aaKnown RBP23.29■■□□□ 1.32
TOP3B-217ENST00000489581 AMOTQ4VCS5 1084 aa23.29■■□□□ 1.32
TOP3B-217ENST00000489581 C10orf71Q711Q0 1435 aa23.29■■□□□ 1.32
TOP3B-217ENST00000489581 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
TOP3B-217ENST00000489581 CCDC87Q9NVE4 849 aa23.29■■□□□ 1.32
TOP3B-217ENST00000489581 C4AP0C0L4 1744 aa23.28■■□□□ 1.32
TOP3B-217ENST00000489581 DPEP1P16444 411 aa23.28■■□□□ 1.32
TOP3B-217ENST00000489581 MTHFSP49914 203 aa23.28■■□□□ 1.32
TOP3B-217ENST00000489581 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
TOP3B-217ENST00000489581 AEBP1Q8IUX7 1158 aa23.28■■□□□ 1.32
TOP3B-217ENST00000489581 PARP3Q9Y6F1 533 aa23.28■■□□□ 1.32
TOP3B-217ENST00000489581 HSPA5P11021 654 aaKnown RBP23.27■■□□□ 1.32
TOP3B-217ENST00000489581 EIF4G2P78344 907 aaKnown RBP eCLIP23.27■■□□□ 1.32
TOP3B-217ENST00000489581 C1orf141Q5JVX7 400 aa23.27■■□□□ 1.32
TOP3B-217ENST00000489581 BRCA1P38398 1863 aaKnown RBP23.26■■□□□ 1.31
TOP3B-217ENST00000489581 FCHSD2O94868 740 aa23.26■■□□□ 1.31
TOP3B-217ENST00000489581 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
TOP3B-217ENST00000489581 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
TOP3B-217ENST00000489581 CRKLP46109 303 aaKnown RBP23.24■■□□□ 1.31
TOP3B-217ENST00000489581 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
TOP3B-217ENST00000489581 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
TOP3B-217ENST00000489581 SRP68Q9UHB9 627 aaKnown RBP23.23■■□□□ 1.31
TOP3B-217ENST00000489581 KCNA3P22001 575 aa23.21■■□□□ 1.31
TOP3B-217ENST00000489581 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
TOP3B-217ENST00000489581 ARFGEF1Q9Y6D6 1849 aa23.21■■□□□ 1.31
TOP3B-217ENST00000489581 FKBP8Q14318 412 aa23.2■■□□□ 1.3
TOP3B-217ENST00000489581 TJP1Q07157 1748 aa23.19■■□□□ 1.3
TOP3B-217ENST00000489581 NMRK2Q9NPI5 230 aa23.19■■□□□ 1.3
TOP3B-217ENST00000489581 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
TOP3B-217ENST00000489581 TOMM70O94826 608 aa23.18■■□□□ 1.3
TOP3B-217ENST00000489581 IL13P35225 146 aa23.18■■□□□ 1.3
TOP3B-217ENST00000489581 PIM2Q9P1W9 311 aa23.18■■□□□ 1.3
TOP3B-217ENST00000489581 DDR1Q08345 913 aa23.17■■□□□ 1.3
TOP3B-217ENST00000489581 C9orf131Q5VYM1 1079 aa23.17■■□□□ 1.3
TOP3B-217ENST00000489581 KNSTRNQ9Y448 316 aa23.17■■□□□ 1.3
TOP3B-217ENST00000489581 APLP1P51693 650 aa23.16■■□□□ 1.3
TOP3B-217ENST00000489581 INTS5Q6P9B9 1019 aaKnown RBP23.16■■□□□ 1.3
TOP3B-217ENST00000489581 VIRMAQ69YN4 1812 aaKnown RBP23.15■■□□□ 1.3
TOP3B-217ENST00000489581 CHRNA5P30532 468 aa23.14■■□□□ 1.29
TOP3B-217ENST00000489581 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
TOP3B-217ENST00000489581 DNAJC10Q8IXB1 793 aa23.14■■□□□ 1.29
TOP3B-217ENST00000489581 LGR6Q9HBX8 967 aa23.14■■□□□ 1.29
TOP3B-217ENST00000489581 ADAMTS7Q9UKP4 1686 aa23.13■■□□□ 1.29
TOP3B-217ENST00000489581 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
TOP3B-217ENST00000489581 SLC52A2Q9HAB3 445 aa23.13■■□□□ 1.29
TOP3B-217ENST00000489581 SBF1O95248 1867 aa23.13■■□□□ 1.29
TOP3B-217ENST00000489581 POLRMTO00411 1230 aaKnown RBP23.12■■□□□ 1.29
TOP3B-217ENST00000489581 ZPR1O75312 459 aa23.11■■□□□ 1.29
TOP3B-217ENST00000489581 TM4SF1P30408 202 aa23.11■■□□□ 1.29
TOP3B-217ENST00000489581 SLC39A6Q13433 755 aa23.11■■□□□ 1.29
TOP3B-217ENST00000489581 USPL1Q5W0Q7 1092 aa23.11■■□□□ 1.29
TOP3B-217ENST00000489581 RNF181Q9P0P0 153 aa23.1■■□□□ 1.29
TOP3B-217ENST00000489581 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
TOP3B-217ENST00000489581 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
TOP3B-217ENST00000489581 HMOX1P09601 288 aa23.09■■□□□ 1.29
TOP3B-217ENST00000489581 DNAJC5GQ8N7S2 189 aa23.09■■□□□ 1.29
TOP3B-217ENST00000489581 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.29
TOP3B-217ENST00000489581 CYP19A1P11511 503 aaPredicted RBP23.08■■□□□ 1.29
TOP3B-217ENST00000489581 AMER1Q5JTC6 1135 aaPredicted RBP23.08■■□□□ 1.29
TOP3B-217ENST00000489581 C16orf71Q8IYS4 520 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms