RNA–Protein interactions for RNA: ENST00000489555.1

PRUNE2-213, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 635 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-213ENST00000489555 PIGBQ92521 554 aa10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 KDM2BQ8NHM5 1336 aa10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 CCDC88AQ3V6T2 1871 aa10.49□□□□□ -0.73
PRUNE2-213ENST00000489555 DLEC1Q9Y238 1755 aa10.48□□□□□ -0.73
PRUNE2-213ENST00000489555 COL13A1Q5TAT6 717 aaPredicted RBP10.48□□□□□ -0.73
PRUNE2-213ENST00000489555 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
PRUNE2-213ENST00000489555 ZC3H4Q9UPT8 1303 aaKnown RBP10.48□□□□□ -0.73
PRUNE2-213ENST00000489555 GNPATO15228 680 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 RRS1Q15050 365 aaKnown RBP10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 USHBP1Q8N6Y0 703 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 CCDC87Q9NVE4 849 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 KDRP35968 1356 aa10.47□□□□□ -0.73
PRUNE2-213ENST00000489555 DICER1Q9UPY3 1922 aaKnown RBP10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 FYB1O15117 783 aa10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 ARHGAP27Q6ZUM4 889 aa10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 TESK2Q96S53 571 aa10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 SIN3AQ96ST3 1273 aa10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 WWC3Q9ULE0 1092 aa10.46□□□□□ -0.73
PRUNE2-213ENST00000489555 TONSLQ96HA7 1378 aa10.46□□□□□ -0.74
PRUNE2-213ENST00000489555 KCPQ6ZWJ8 1503 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 FBLN1P23142 703 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 TMF1P82094 1093 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 ITPK1Q13572 414 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 TRAPPC3LQ5T215 181 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 RC3H1Q5TC82 1133 aaKnown RBP10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 SMC1BQ8NDV3 1235 aa10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 RTCBQ9Y3I0 505 aaKnown RBP10.45□□□□□ -0.74
PRUNE2-213ENST00000489555 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
PRUNE2-213ENST00000489555 CNTNAP4Q9C0A0 1308 aa10.44□□□□□ -0.74
PRUNE2-213ENST00000489555 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
PRUNE2-213ENST00000489555 FCHSD2O94868 740 aa10.44□□□□□ -0.74
PRUNE2-213ENST00000489555 C9orf131Q5VYM1 1079 aa10.44□□□□□ -0.74
PRUNE2-213ENST00000489555 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
PRUNE2-213ENST00000489555 KDM6AO15550 1401 aaPredicted RBP10.43□□□□□ -0.74
PRUNE2-213ENST00000489555 AFDNP55196 1824 aaKnown RBP10.43□□□□□ -0.74
PRUNE2-213ENST00000489555 DPEP1P16444 411 aa10.43□□□□□ -0.74
PRUNE2-213ENST00000489555 IFNL2Q8IZJ0 200 aa10.43□□□□□ -0.74
PRUNE2-213ENST00000489555 PIM2Q9P1W9 311 aa10.43□□□□□ -0.74
PRUNE2-213ENST00000489555 ADAMTS7Q9UKP4 1686 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 GYS1P13807 737 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 KCNA3P22001 575 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 SMIM5Q71RC9 77 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 GGNBP2Q9H3C7 697 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 ATG3Q9NT62 314 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 ASAP1Q9ULH1 1129 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 PARP3Q9Y6F1 533 aa10.42□□□□□ -0.74
PRUNE2-213ENST00000489555 NRXN2Q9P2S2 1712 aa10.41□□□□□ -0.74
PRUNE2-213ENST00000489555 PHKG2P15735 406 aa10.41□□□□□ -0.74
PRUNE2-213ENST00000489555 RFC4P35249 363 aa10.41□□□□□ -0.74
PRUNE2-213ENST00000489555 ARHGEF1Q92888 912 aaKnown RBP10.41□□□□□ -0.74
PRUNE2-213ENST00000489555 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
PRUNE2-213ENST00000489555 TJP1Q07157 1748 aa10.41□□□□□ -0.74
PRUNE2-213ENST00000489555 WASHC2AQ641Q2 1341 aa10.4□□□□□ -0.74
PRUNE2-213ENST00000489555 ST20-MTHFSA0A0A6YYL1 179 aa10.4□□□□□ -0.74
PRUNE2-213ENST00000489555 ERVV-2B6SEH9 535 aa10.4□□□□□ -0.74
PRUNE2-213ENST00000489555 RPS6KA4O75676 772 aa10.4□□□□□ -0.74
PRUNE2-213ENST00000489555 HTRA3P83110 453 aa10.4□□□□□ -0.74
PRUNE2-213ENST00000489555 RNF181Q9P0P0 153 aa10.4□□□□□ -0.74
PRUNE2-213ENST00000489555 SCN11AQ9UI33 1791 aa10.39□□□□□ -0.75
PRUNE2-213ENST00000489555 CAPN15O75808 1086 aa10.39□□□□□ -0.75
PRUNE2-213ENST00000489555 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
PRUNE2-213ENST00000489555 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
PRUNE2-213ENST00000489555 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
PRUNE2-213ENST00000489555 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
PRUNE2-213ENST00000489555 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
PRUNE2-213ENST00000489555 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
PRUNE2-213ENST00000489555 VEGFAP15692 232 aaPredicted RBP10.38□□□□□ -0.75
PRUNE2-213ENST00000489555 USP42Q9H9J4 1324 aaKnown RBP10.37□□□□□ -0.75
PRUNE2-213ENST00000489555 GLTPD2A6NH11 291 aa10.37□□□□□ -0.75
PRUNE2-213ENST00000489555 SLC4A9Q96Q91 983 aa10.37□□□□□ -0.75
PRUNE2-213ENST00000489555 EYA1Q99502 592 aa10.37□□□□□ -0.75
PRUNE2-213ENST00000489555 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
PRUNE2-213ENST00000489555 SCN4AP35499 1836 aa10.36□□□□□ -0.75
PRUNE2-213ENST00000489555 LMNB1P20700 586 aa10.36□□□□□ -0.75
PRUNE2-213ENST00000489555 ARFGEF2Q9Y6D5 1785 aa10.35□□□□□ -0.75
PRUNE2-213ENST00000489555 DDR1Q08345 913 aa10.35□□□□□ -0.75
PRUNE2-213ENST00000489555 SLC34A2O95436 690 aa10.34□□□□□ -0.75
PRUNE2-213ENST00000489555 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
PRUNE2-213ENST00000489555 ANKRD31Q8N7Z5 1873 aa10.34□□□□□ -0.75
PRUNE2-213ENST00000489555 POLRMTO00411 1230 aaKnown RBP10.33□□□□□ -0.76
PRUNE2-213ENST00000489555 TM4SF1P30408 202 aa10.33□□□□□ -0.76
PRUNE2-213ENST00000489555 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
PRUNE2-213ENST00000489555 FKBP8Q14318 412 aa10.33□□□□□ -0.76
PRUNE2-213ENST00000489555 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
PRUNE2-213ENST00000489555 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
PRUNE2-213ENST00000489555 PPM1GO15355 546 aaPredicted RBP10.32□□□□□ -0.76
PRUNE2-213ENST00000489555 CHRNA5P30532 468 aa10.32□□□□□ -0.76
PRUNE2-213ENST00000489555 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
PRUNE2-213ENST00000489555 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
PRUNE2-213ENST00000489555 PDE4DIPQ5VU43 2346 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms