RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 DIP2BQ9P265 1576 aa11.45□□□□□ -0.58
SMC6-209ENST00000489535 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
SMC6-209ENST00000489535 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
SMC6-209ENST00000489535 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
SMC6-209ENST00000489535 GLI2P10070 1586 aa11.45□□□□□ -0.58
SMC6-209ENST00000489535 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
SMC6-209ENST00000489535 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
SMC6-209ENST00000489535 DHX57Q6P158 1386 aaKnown RBP11.44□□□□□ -0.58
SMC6-209ENST00000489535 PPRC1Q5VV67 1664 aaKnown RBP11.44□□□□□ -0.58
SMC6-209ENST00000489535 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
SMC6-209ENST00000489535 CCDC116Q8IYX3 515 aa11.44□□□□□ -0.58
SMC6-209ENST00000489535 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
SMC6-209ENST00000489535 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
SMC6-209ENST00000489535 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
SMC6-209ENST00000489535 VASH1Q7L8A9 365 aaPredicted RBP11.43□□□□□ -0.58
SMC6-209ENST00000489535 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
SMC6-209ENST00000489535 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
SMC6-209ENST00000489535 FANCAO15360 1455 aa11.43□□□□□ -0.58
SMC6-209ENST00000489535 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
SMC6-209ENST00000489535 ARHGEF12Q9NZN5 1544 aa11.42□□□□□ -0.58
SMC6-209ENST00000489535 SPINT1O43278 529 aa11.42□□□□□ -0.58
SMC6-209ENST00000489535 ITGA6P23229 1130 aa11.42□□□□□ -0.58
SMC6-209ENST00000489535 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMC6-209ENST00000489535 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
SMC6-209ENST00000489535 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
SMC6-209ENST00000489535 VWA5B2Q8N398 1253 aa11.42□□□□□ -0.58
SMC6-209ENST00000489535 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
SMC6-209ENST00000489535 KIAA1107Q9UPP5 1409 aa11.42□□□□□ -0.58
SMC6-209ENST00000489535 AMHR2Q16671 573 aa11.41□□□□□ -0.58
SMC6-209ENST00000489535 EFCAB2Q5VUJ9 269 aa11.41□□□□□ -0.58
SMC6-209ENST00000489535 Q6ZVU0 165 aa11.41□□□□□ -0.58
SMC6-209ENST00000489535 SCARF2Q96GP6 870 aaPredicted RBP11.41□□□□□ -0.58
SMC6-209ENST00000489535 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
SMC6-209ENST00000489535 RICTORQ6R327 1708 aa11.4□□□□□ -0.58
SMC6-209ENST00000489535 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.4□□□□□ -0.58
SMC6-209ENST00000489535 CBLBQ13191 982 aa11.4□□□□□ -0.58
SMC6-209ENST00000489535 SH3BP5LQ7L8J4 393 aa11.4□□□□□ -0.58
SMC6-209ENST00000489535 NCOA1Q15788 1441 aa11.4□□□□□ -0.58
SMC6-209ENST00000489535 ANKRD30AQ9BXX3 1397 aa11.4□□□□□ -0.59
SMC6-209ENST00000489535 ADGRL1O94910 1474 aa11.39□□□□□ -0.59
SMC6-209ENST00000489535 KIDINS220Q9ULH0 1771 aa11.39□□□□□ -0.59
SMC6-209ENST00000489535 CD109Q6YHK3 1445 aa11.39□□□□□ -0.59
SMC6-209ENST00000489535 SV2AQ7L0J3 742 aa11.39□□□□□ -0.59
SMC6-209ENST00000489535 CABLES1Q8TDN4 633 aa11.39□□□□□ -0.59
SMC6-209ENST00000489535 CDC14CA4D256 554 aa11.38□□□□□ -0.59
SMC6-209ENST00000489535 TSPY4P0CV99 314 aa11.38□□□□□ -0.59
SMC6-209ENST00000489535 TSPY10P0CW01 314 aa11.38□□□□□ -0.59
SMC6-209ENST00000489535 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
SMC6-209ENST00000489535 ARMC2Q8NEN0 867 aa11.38□□□□□ -0.59
SMC6-209ENST00000489535 ZFYVE16Q7Z3T8 1539 aa11.38□□□□□ -0.59
SMC6-209ENST00000489535 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
SMC6-209ENST00000489535 PPP1R26Q5T8A7 1209 aaPredicted RBP11.37□□□□□ -0.59
SMC6-209ENST00000489535 LYPD4Q6UWN0 246 aa11.37□□□□□ -0.59
SMC6-209ENST00000489535 TRAPPC8Q9Y2L5 1435 aa11.36□□□□□ -0.59
SMC6-209ENST00000489535 ATP7AQ04656 1500 aa11.36□□□□□ -0.59
SMC6-209ENST00000489535 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
SMC6-209ENST00000489535 KRTAP9-2Q9BYQ4 174 aa11.36□□□□□ -0.59
SMC6-209ENST00000489535 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
SMC6-209ENST00000489535 UNC13BO14795 1591 aa11.36□□□□□ -0.59
SMC6-209ENST00000489535 ADAM23O75077 832 aa11.35□□□□□ -0.59
SMC6-209ENST00000489535 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
SMC6-209ENST00000489535 HECW2Q9P2P5 1572 aa11.35□□□□□ -0.59
SMC6-209ENST00000489535 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
SMC6-209ENST00000489535 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
SMC6-209ENST00000489535 KDM5CP41229 1560 aa11.34□□□□□ -0.59
SMC6-209ENST00000489535 NEO1Q92859 1461 aa11.34□□□□□ -0.59
SMC6-209ENST00000489535 MAGEB6P1A0A0J9YX57 407 aa11.34□□□□□ -0.59
SMC6-209ENST00000489535 EIF2AK4Q9P2K8 1649 aaKnown RBP11.34□□□□□ -0.59
SMC6-209ENST00000489535 SCAPERQ9BY12 1400 aa11.34□□□□□ -0.59
SMC6-209ENST00000489535 KIF15Q9NS87 1388 aa11.33□□□□□ -0.6
SMC6-209ENST00000489535 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
SMC6-209ENST00000489535 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
SMC6-209ENST00000489535 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
SMC6-209ENST00000489535 ANKRD50Q9ULJ7 1429 aa11.33□□□□□ -0.6
SMC6-209ENST00000489535 ZNF518AQ6AHZ1 1483 aa11.32□□□□□ -0.6
SMC6-209ENST00000489535 DEPDC5O75140 1603 aa11.32□□□□□ -0.6
SMC6-209ENST00000489535 ABCA6Q8N139 1617 aa11.32□□□□□ -0.6
SMC6-209ENST00000489535 KDM5DQ9BY66 1539 aa11.32□□□□□ -0.6
SMC6-209ENST00000489535 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
SMC6-209ENST00000489535 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
SMC6-209ENST00000489535 ACIN1Q9UKV3 1341 aaKnown RBP11.32□□□□□ -0.6
SMC6-209ENST00000489535 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 KRTAP9-6A0A140TA67 174 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 ITGB2P05107 769 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 CELA2BP08218 269 aaPredicted RBP11.31□□□□□ -0.6
SMC6-209ENST00000489535 PLA2G4EQ3MJ16 856 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 CARD14Q9BXL6 1004 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 RTEL1-TNFRSF6BF6WH68 1400 aa11.31□□□□□ -0.6
SMC6-209ENST00000489535 CEP152O94986 1710 aa11.3□□□□□ -0.6
SMC6-209ENST00000489535 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
SMC6-209ENST00000489535 MSTNO14793 375 aa11.3□□□□□ -0.6
SMC6-209ENST00000489535 SRSF11Q05519 484 aaKnown RBP11.3□□□□□ -0.6
SMC6-209ENST00000489535 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
SMC6-209ENST00000489535 SPAG9O60271 1321 aaKnown RBP11.3□□□□□ -0.6
SMC6-209ENST00000489535 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 POGZQ7Z3K3 1410 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 GAS6Q14393 721 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 TSC1Q92574 1164 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms