RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 PHF14O94880 888 aa27.35■■□□□ 1.97
CACFD1-205ENST00000489519 ITPK1Q13572 414 aa27.35■■□□□ 1.97
CACFD1-205ENST00000489519 AMIGO3Q86WK7 504 aa27.35■■□□□ 1.97
CACFD1-205ENST00000489519 AEBP1Q8IUX7 1158 aa27.35■■□□□ 1.97
CACFD1-205ENST00000489519 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
CACFD1-205ENST00000489519 ZNF784Q8NCA9 323 aaPredicted RBP27.35■■□□□ 1.97
CACFD1-205ENST00000489519 CD2APQ9Y5K6 639 aa27.35■■□□□ 1.97
CACFD1-205ENST00000489519 IL13P35225 146 aa27.34■■□□□ 1.97
CACFD1-205ENST00000489519 C1orf141Q5JVX7 400 aa27.34■■□□□ 1.97
CACFD1-205ENST00000489519 SULT6B1Q6IMI4 303 aa27.34■■□□□ 1.97
CACFD1-205ENST00000489519 MTHFSP49914 203 aa27.33■■□□□ 1.97
CACFD1-205ENST00000489519 GOLGB1Q14789 3259 aaKnown RBP27.32■■□□□ 1.96
CACFD1-205ENST00000489519 GNPATO15228 680 aa27.32■■□□□ 1.96
CACFD1-205ENST00000489519 CABP4P57796 275 aa27.32■■□□□ 1.96
CACFD1-205ENST00000489519 KDRP35968 1356 aa27.32■■□□□ 1.96
CACFD1-205ENST00000489519 PER1O15534 1290 aaPredicted RBP27.3■■□□□ 1.96
CACFD1-205ENST00000489519 GRIN3BO60391 1043 aa27.3■■□□□ 1.96
CACFD1-205ENST00000489519 SMIM5Q71RC9 77 aa27.29■■□□□ 1.96
CACFD1-205ENST00000489519 RBM42Q9BTD8 480 aaKnown RBP27.29■■□□□ 1.96
CACFD1-205ENST00000489519 KDM6AO15550 1401 aaPredicted RBP27.29■■□□□ 1.96
CACFD1-205ENST00000489519 ZNF831Q5JPB2 1677 aa27.27■■□□□ 1.96
CACFD1-205ENST00000489519 RC3H1Q5TC82 1133 aaKnown RBP27.26■■□□□ 1.95
CACFD1-205ENST00000489519 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
CACFD1-205ENST00000489519 RTCBQ9Y3I0 505 aaKnown RBP27.26■■□□□ 1.95
CACFD1-205ENST00000489519 YBX3P16989 372 aaKnown RBP eCLIP27.25■■□□□ 1.95
CACFD1-205ENST00000489519 NFATC2IPQ8NCF5 419 aa27.25■■□□□ 1.95
CACFD1-205ENST00000489519 TRAPPC3LQ5T215 181 aa27.24■■□□□ 1.95
CACFD1-205ENST00000489519 CC2D1BQ5T0F9 858 aaKnown RBP27.23■■□□□ 1.95
CACFD1-205ENST00000489519 CNTNAP4Q9C0A0 1308 aa27.22■■□□□ 1.95
CACFD1-205ENST00000489519 ADRA2BP18089 450 aa27.22■■□□□ 1.95
CACFD1-205ENST00000489519 AKAP4Q5JQC9 854 aa27.22■■□□□ 1.95
CACFD1-205ENST00000489519 DIAPH1O60610 1272 aaKnown RBP27.2■■□□□ 1.94
CACFD1-205ENST00000489519 PTCD1O75127 700 aaKnown RBP27.2■■□□□ 1.94
CACFD1-205ENST00000489519 NLGN1Q8N2Q7 840 aa27.2■■□□□ 1.94
CACFD1-205ENST00000489519 NPC1L1Q9UHC9 1359 aa27.2■■□□□ 1.94
CACFD1-205ENST00000489519 RPS6KA4O75676 772 aa27.19■■□□□ 1.94
CACFD1-205ENST00000489519 HMOX1P09601 288 aa27.18■■□□□ 1.94
CACFD1-205ENST00000489519 SCN11AQ9UI33 1791 aa27.17■■□□□ 1.94
CACFD1-205ENST00000489519 COL5A3P25940 1745 aaPredicted RBP27.17■■□□□ 1.94
CACFD1-205ENST00000489519 MMP10P09238 476 aa27.17■■□□□ 1.94
CACFD1-205ENST00000489519 ARHGEF1Q92888 912 aaKnown RBP27.17■■□□□ 1.94
CACFD1-205ENST00000489519 RFC4P35249 363 aa27.16■■□□□ 1.94
CACFD1-205ENST00000489519 SLC52A2Q9HAB3 445 aa27.14■■□□□ 1.94
CACFD1-205ENST00000489519 MYH14Q7Z406 1995 aaKnown RBP27.13■■□□□ 1.93
CACFD1-205ENST00000489519 LGR6Q9HBX8 967 aa27.13■■□□□ 1.93
CACFD1-205ENST00000489519 CRKLP46109 303 aaKnown RBP27.12■■□□□ 1.93
CACFD1-205ENST00000489519 RNMTO43148 476 aaKnown RBP27.11■■□□□ 1.93
CACFD1-205ENST00000489519 MTHFSDQ2M296 383 aaKnown RBP27.11■■□□□ 1.93
CACFD1-205ENST00000489519 GYS1P13807 737 aa27.1■■□□□ 1.93
CACFD1-205ENST00000489519 TGFB2P61812 414 aa27.08■■□□□ 1.93
CACFD1-205ENST00000489519 CNGB1Q14028 1251 aaPredicted RBP27.08■■□□□ 1.93
CACFD1-205ENST00000489519 C1QTNF8P60827 252 aa27.07■■□□□ 1.92
CACFD1-205ENST00000489519 CICQ96RK0 1608 aaPredicted RBP27.07■■□□□ 1.92
CACFD1-205ENST00000489519 MRC1P22897 1456 aa27.06■■□□□ 1.92
CACFD1-205ENST00000489519 U2SURPO15042 1029 aaKnown RBP27.06■■□□□ 1.92
CACFD1-205ENST00000489519 CCDC87Q9NVE4 849 aa27.06■■□□□ 1.92
CACFD1-205ENST00000489519 PARP3Q9Y6F1 533 aa27.06■■□□□ 1.92
CACFD1-205ENST00000489519 GIGYF1O75420 1035 aaPredicted RBP27.05■■□□□ 1.92
CACFD1-205ENST00000489519 INTS5Q6P9B9 1019 aaKnown RBP27.05■■□□□ 1.92
CACFD1-205ENST00000489519 TJP1Q07157 1748 aa27.04■■□□□ 1.92
CACFD1-205ENST00000489519 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
CACFD1-205ENST00000489519 DNAJC10Q8IXB1 793 aa27.04■■□□□ 1.92
CACFD1-205ENST00000489519 WWC3Q9ULE0 1092 aa27.04■■□□□ 1.92
CACFD1-205ENST00000489519 COL3A1P02461 1466 aaPredicted RBP27.04■■□□□ 1.92
CACFD1-205ENST00000489519 VIRMAQ69YN4 1812 aaKnown RBP27.04■■□□□ 1.92
CACFD1-205ENST00000489519 C4AP0C0L4 1744 aa27.03■■□□□ 1.92
CACFD1-205ENST00000489519 SLC39A6Q13433 755 aa27.03■■□□□ 1.92
CACFD1-205ENST00000489519 ADAMTS7Q9UKP4 1686 aa27.02■■□□□ 1.92
CACFD1-205ENST00000489519 USP42Q9H9J4 1324 aaKnown RBP27.02■■□□□ 1.92
CACFD1-205ENST00000489519 CFAP53Q96M91 514 aa27.02■■□□□ 1.92
CACFD1-205ENST00000489519 C10orf71Q711Q0 1435 aa27.01■■□□□ 1.91
CACFD1-205ENST00000489519 VSIG10Q8N0Z9 540 aa27.01■■□□□ 1.91
CACFD1-205ENST00000489519 GAS2L2Q8NHY3 880 aa27.01■■□□□ 1.91
CACFD1-205ENST00000489519 PXDNLA1KZ92 1463 aa27■■□□□ 1.91
CACFD1-205ENST00000489519 CYP19A1P11511 503 aaPredicted RBP27■■□□□ 1.91
CACFD1-205ENST00000489519 SRP68Q9UHB9 627 aaKnown RBP27■■□□□ 1.91
CACFD1-205ENST00000489519 A0A0G2JLW4 131 aa26.99■■□□□ 1.91
CACFD1-205ENST00000489519 GNAT3A8MTJ3 354 aa26.99■■□□□ 1.91
CACFD1-205ENST00000489519 ZPR1O75312 459 aa26.99■■□□□ 1.91
CACFD1-205ENST00000489519 FKBP8Q14318 412 aa26.99■■□□□ 1.91
CACFD1-205ENST00000489519 ATP10DQ9P241 1426 aa26.99■■□□□ 1.91
CACFD1-205ENST00000489519 SOS1Q07889 1333 aaPredicted RBP26.97■■□□□ 1.91
CACFD1-205ENST00000489519 KCPQ6ZWJ8 1503 aa26.96■■□□□ 1.91
CACFD1-205ENST00000489519 TEFQ10587 303 aa26.96■■□□□ 1.91
CACFD1-205ENST00000489519 TTC5Q8N0Z6 440 aa26.96■■□□□ 1.91
CACFD1-205ENST00000489519 NUDCQ9Y266 331 aa26.96■■□□□ 1.91
CACFD1-205ENST00000489519 N4BP2Q86UW6 1770 aaPredicted RBP26.96■■□□□ 1.91
CACFD1-205ENST00000489519 ADCY9O60503 1353 aa26.96■■□□□ 1.91
CACFD1-205ENST00000489519 DPEP1P16444 411 aa26.95■■□□□ 1.9
CACFD1-205ENST00000489519 IL17REQ8NFR9 667 aa26.95■■□□□ 1.9
CACFD1-205ENST00000489519 BCS1LQ9Y276 419 aa26.95■■□□□ 1.9
CACFD1-205ENST00000489519 KIAA1551Q9HCM1 1747 aa26.95■■□□□ 1.9
CACFD1-205ENST00000489519 GPBP1L1Q9HC44 474 aaPredicted RBP26.94■■□□□ 1.9
CACFD1-205ENST00000489519 SENP3-EIF4A1A0A087X0R7 540 aa26.93■■□□□ 1.9
CACFD1-205ENST00000489519 STARD3NLO95772 234 aa26.93■■□□□ 1.9
CACFD1-205ENST00000489519 TM4SF1P30408 202 aa26.93■■□□□ 1.9
CACFD1-205ENST00000489519 DDR1Q08345 913 aa26.93■■□□□ 1.9
CACFD1-205ENST00000489519 USPL1Q5W0Q7 1092 aa26.93■■□□□ 1.9
CACFD1-205ENST00000489519 NARFQ9UHQ1 456 aa26.93■■□□□ 1.9
CACFD1-205ENST00000489519 PRKAR2BP31323 418 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms