RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 CHL1O00533 1208 aa23.66■■□□□ 1.38
C9orf16-203ENST00000489240 FANCIQ9NVI1 1328 aa23.65■■□□□ 1.38
C9orf16-203ENST00000489240 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
C9orf16-203ENST00000489240 SLC52A2Q9HAB3 445 aa23.65■■□□□ 1.38
C9orf16-203ENST00000489240 CABP4P57796 275 aa23.64■■□□□ 1.37
C9orf16-203ENST00000489240 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.37
C9orf16-203ENST00000489240 RXRBP28702 533 aa23.63■■□□□ 1.37
C9orf16-203ENST00000489240 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
C9orf16-203ENST00000489240 MBIPQ9NS73 344 aa23.63■■□□□ 1.37
C9orf16-203ENST00000489240 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
C9orf16-203ENST00000489240 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
C9orf16-203ENST00000489240 BTBD11A6QL63 1104 aa23.61■■□□□ 1.37
C9orf16-203ENST00000489240 NFATC2IPQ8NCF5 419 aa23.61■■□□□ 1.37
C9orf16-203ENST00000489240 PAPPAQ13219 1627 aa23.6■■□□□ 1.37
C9orf16-203ENST00000489240 SBF2Q86WG5 1849 aa23.59■■□□□ 1.37
C9orf16-203ENST00000489240 MIS18AQ9NYP9 233 aa23.59■■□□□ 1.37
C9orf16-203ENST00000489240 TMOD3Q9NYL9 352 aa23.58■■□□□ 1.37
C9orf16-203ENST00000489240 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
C9orf16-203ENST00000489240 POTEAQ6S8J7 498 aa23.57■■□□□ 1.36
C9orf16-203ENST00000489240 UBR2Q8IWV8 1755 aa23.57■■□□□ 1.36
C9orf16-203ENST00000489240 CT47B1P0C2W7 299 aaPredicted RBP23.56■■□□□ 1.36
C9orf16-203ENST00000489240 NHSQ6T4R5 1651 aa23.56■■□□□ 1.36
C9orf16-203ENST00000489240 BCL9O00512 1426 aa23.56■■□□□ 1.36
C9orf16-203ENST00000489240 KRT27Q7Z3Y8 459 aa23.54■■□□□ 1.36
C9orf16-203ENST00000489240 PRIM1P49642 420 aaKnown RBP23.52■■□□□ 1.36
C9orf16-203ENST00000489240 ZNF790Q6PG37 636 aa23.52■■□□□ 1.36
C9orf16-203ENST00000489240 TTC5Q8N0Z6 440 aa23.52■■□□□ 1.36
C9orf16-203ENST00000489240 SYTL4Q96C24 671 aaPredicted RBP23.52■■□□□ 1.36
C9orf16-203ENST00000489240 RGS12O14924 1447 aa23.51■■□□□ 1.35
C9orf16-203ENST00000489240 PIGBQ92521 554 aa23.51■■□□□ 1.35
C9orf16-203ENST00000489240 ACSBG1Q96GR2 724 aa23.51■■□□□ 1.35
C9orf16-203ENST00000489240 SOS1Q07889 1333 aaPredicted RBP23.51■■□□□ 1.35
C9orf16-203ENST00000489240 EIF4A1P60842 406 aaKnown RBP23.5■■□□□ 1.35
C9orf16-203ENST00000489240 TWISTNBQ3B726 338 aaPredicted RBP23.5■■□□□ 1.35
C9orf16-203ENST00000489240 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
C9orf16-203ENST00000489240 CACNA1FO60840 1977 aa23.5■■□□□ 1.35
C9orf16-203ENST00000489240 BTAF1O14981 1849 aa23.49■■□□□ 1.35
C9orf16-203ENST00000489240 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
C9orf16-203ENST00000489240 C8orf58Q8NAV2 365 aa23.49■■□□□ 1.35
C9orf16-203ENST00000489240 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
C9orf16-203ENST00000489240 KCNQ3O43525 872 aa23.48■■□□□ 1.35
C9orf16-203ENST00000489240 FAM196AQ6ZSG2 479 aa23.48■■□□□ 1.35
C9orf16-203ENST00000489240 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
C9orf16-203ENST00000489240 FAM182BQ5T319 152 aa23.47■■□□□ 1.35
C9orf16-203ENST00000489240 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
C9orf16-203ENST00000489240 C5P01031 1676 aa23.47■■□□□ 1.35
C9orf16-203ENST00000489240 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
C9orf16-203ENST00000489240 VAMP4O75379 141 aa23.46■■□□□ 1.35
C9orf16-203ENST00000489240 KCPQ6ZWJ8 1503 aa23.46■■□□□ 1.35
C9orf16-203ENST00000489240 FMNL2Q96PY5 1086 aa23.46■■□□□ 1.35
C9orf16-203ENST00000489240 CHMP4AQ9BY43 222 aa23.46■■□□□ 1.35
C9orf16-203ENST00000489240 HEG1Q9ULI3 1381 aa23.46■■□□□ 1.35
C9orf16-203ENST00000489240 HOXB7P09629 217 aa23.45■■□□□ 1.34
C9orf16-203ENST00000489240 KRT24Q2M2I5 525 aa23.45■■□□□ 1.34
C9orf16-203ENST00000489240 ATG3Q9NT62 314 aa23.44■■□□□ 1.34
C9orf16-203ENST00000489240 KCNQ2O43526 872 aa23.43■■□□□ 1.34
C9orf16-203ENST00000489240 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
C9orf16-203ENST00000489240 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
C9orf16-203ENST00000489240 RARSP54136 660 aaKnown RBP23.42■■□□□ 1.34
C9orf16-203ENST00000489240 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
C9orf16-203ENST00000489240 SMARCC1Q92922 1105 aaPredicted RBP23.42■■□□□ 1.34
C9orf16-203ENST00000489240 ZNF831Q5JPB2 1677 aa23.41■■□□□ 1.34
C9orf16-203ENST00000489240 GIGYF1O75420 1035 aaPredicted RBP23.41■■□□□ 1.34
C9orf16-203ENST00000489240 SNRPA1P09661 255 aaKnown RBP23.4■■□□□ 1.34
C9orf16-203ENST00000489240 CICQ96RK0 1608 aaPredicted RBP23.4■■□□□ 1.34
C9orf16-203ENST00000489240 PTCD1O75127 700 aaKnown RBP23.39■■□□□ 1.33
C9orf16-203ENST00000489240 CCDC30Q5VVM6 783 aa23.39■■□□□ 1.33
C9orf16-203ENST00000489240 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
C9orf16-203ENST00000489240 LY75O60449 1722 aa23.39■■□□□ 1.33
C9orf16-203ENST00000489240 VSIG10Q8N0Z9 540 aa23.38■■□□□ 1.33
C9orf16-203ENST00000489240 RBM42Q9BTD8 480 aaKnown RBP23.38■■□□□ 1.33
C9orf16-203ENST00000489240 SUPT16HQ9Y5B9 1047 aaKnown RBP23.38■■□□□ 1.33
C9orf16-203ENST00000489240 TJP1Q07157 1748 aa23.38■■□□□ 1.33
C9orf16-203ENST00000489240 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
C9orf16-203ENST00000489240 SSH1Q8WYL5 1049 aa23.37■■□□□ 1.33
C9orf16-203ENST00000489240 SMC4Q9NTJ3 1288 aa23.37■■□□□ 1.33
C9orf16-203ENST00000489240 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
C9orf16-203ENST00000489240 STK31Q9BXU1 1019 aa23.36■■□□□ 1.33
C9orf16-203ENST00000489240 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
C9orf16-203ENST00000489240 BCAR3O75815 825 aa23.35■■□□□ 1.33
C9orf16-203ENST00000489240 EIF2S2P20042 333 aaKnown RBP23.35■■□□□ 1.33
C9orf16-203ENST00000489240 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
C9orf16-203ENST00000489240 BRPF1P55201 1214 aaPredicted RBP23.34■■□□□ 1.33
C9orf16-203ENST00000489240 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
C9orf16-203ENST00000489240 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.33
C9orf16-203ENST00000489240 TNS1Q9HBL0 1735 aaKnown RBP23.33■■□□□ 1.33
C9orf16-203ENST00000489240 PTF1AQ7RTS3 328 aa23.33■■□□□ 1.33
C9orf16-203ENST00000489240 KIF16BQ96L93 1317 aa23.33■■□□□ 1.32
C9orf16-203ENST00000489240 PRAMEF22A3QJZ6 481 aa23.32■■□□□ 1.32
C9orf16-203ENST00000489240 TRIM37O94972 964 aa23.32■■□□□ 1.32
C9orf16-203ENST00000489240 MRPL50Q8N5N7 158 aaKnown RBP23.32■■□□□ 1.32
C9orf16-203ENST00000489240 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
C9orf16-203ENST00000489240 USP16Q9Y5T5 823 aa23.32■■□□□ 1.32
C9orf16-203ENST00000489240 COL5A3P25940 1745 aaPredicted RBP23.32■■□□□ 1.32
C9orf16-203ENST00000489240 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
C9orf16-203ENST00000489240 RRP1P56182 461 aaKnown RBP23.31■■□□□ 1.32
C9orf16-203ENST00000489240 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
C9orf16-203ENST00000489240 LOC102724428A0A0B4J2F2 783 aa23.3■■□□□ 1.32
C9orf16-203ENST00000489240 SIK1P57059 783 aa23.3■■□□□ 1.32
C9orf16-203ENST00000489240 DBF4Q9UBU7 674 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms