RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 COG6Q9Y2V7 657 aa11.35□□□□□ -0.59
EXOSC1-211ENST00000489158 SCN11AQ9UI33 1791 aa11.35□□□□□ -0.59
EXOSC1-211ENST00000489158 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
EXOSC1-211ENST00000489158 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
EXOSC1-211ENST00000489158 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
EXOSC1-211ENST00000489158 SLIT2O94813 1529 aa11.34□□□□□ -0.59
EXOSC1-211ENST00000489158 MBIPQ9NS73 344 aa11.34□□□□□ -0.59
EXOSC1-211ENST00000489158 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.34□□□□□ -0.59
EXOSC1-211ENST00000489158 SIPA1L3O60292 1781 aaPredicted RBP11.33□□□□□ -0.59
EXOSC1-211ENST00000489158 NUTM2BA6NNL0 878 aaPredicted RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 NUTM2EB1AL46 878 aaPredicted RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 CHL1O00533 1208 aa11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 ADAMTS2O95450 1211 aa11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 L1TD1Q5T7N2 865 aaKnown RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 NUTM2AQ8IVF1 878 aaPredicted RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 RRAGDQ9NQL2 400 aaPredicted RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 HSP90AB1P08238 724 aaKnown RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 IL2RBP14784 551 aa11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 LARP1Q6PKG0 1096 aaKnown RBP11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
EXOSC1-211ENST00000489158 SOS1Q07889 1333 aaPredicted RBP11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 TSPYL4Q9UJ04 414 aa11.32□□□□□ -0.6
EXOSC1-211ENST00000489158 MRC1P22897 1456 aa11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 HSPA1LP34931 641 aa11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 TAF7Q15545 349 aaPredicted RBP11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 ALDH1L2Q3SY69 923 aa11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 MIS18AQ9NYP9 233 aa11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 THRAP3Q9Y2W1 955 aaKnown RBP11.31□□□□□ -0.6
EXOSC1-211ENST00000489158 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 PHKG2P15735 406 aa11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 TEFQ10587 303 aa11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 ZCRB1Q8TBF4 217 aaKnown RBP11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
EXOSC1-211ENST00000489158 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 DCAF5Q96JK2 942 aa11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 ARXQ96QS3 562 aa11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
EXOSC1-211ENST00000489158 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 LRP6O75581 1613 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 TNNQ9UQP3 1299 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
EXOSC1-211ENST00000489158 VAMP4O75379 141 aa11.27□□□□□ -0.6
EXOSC1-211ENST00000489158 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.6
EXOSC1-211ENST00000489158 SSH1Q8WYL5 1049 aa11.27□□□□□ -0.6
EXOSC1-211ENST00000489158 TNS2Q63HR2 1409 aa11.27□□□□□ -0.61
EXOSC1-211ENST00000489158 CYP27B1O15528 508 aa11.27□□□□□ -0.61
EXOSC1-211ENST00000489158 XRCC6P12956 609 aaKnown RBP eCLIP11.27□□□□□ -0.61
EXOSC1-211ENST00000489158 KRT24Q2M2I5 525 aa11.27□□□□□ -0.61
EXOSC1-211ENST00000489158 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
EXOSC1-211ENST00000489158 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-211ENST00000489158 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 GOLGA6L3A6NEY3 463 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 RLBP1P12271 317 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 BTBD11A6QL63 1104 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 HOXB7P09629 217 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
EXOSC1-211ENST00000489158 BCL9LQ86UU0 1499 aa11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 MCM4P33991 863 aa11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 VPS72Q15906 364 aa11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
EXOSC1-211ENST00000489158 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 IPO8O15397 1037 aaKnown RBP11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 ZKSCAN2Q63HK3 967 aa11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 DDX54Q8TDD1 881 aaKnown RBP11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 C8orf37Q96NL8 207 aa11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 PAPPAQ13219 1627 aa11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 FSD2A1L4K1 749 aa11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 AAMPQ13685 434 aa11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
EXOSC1-211ENST00000489158 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms