RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
RN7SL28P-201ENST00000488836 ATP6V1AP38606 617 aa11.77□□□□□ -0.53
RN7SL28P-201ENST00000488836 ADCY9O60503 1353 aa11.77□□□□□ -0.53
RN7SL28P-201ENST00000488836 MAP2P11137 1827 aaKnown RBP11.76□□□□□ -0.53
RN7SL28P-201ENST00000488836 PHKG2P15735 406 aa11.76□□□□□ -0.53
RN7SL28P-201ENST00000488836 EYA1Q99502 592 aa11.76□□□□□ -0.53
RN7SL28P-201ENST00000488836 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
RN7SL28P-201ENST00000488836 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
RN7SL28P-201ENST00000488836 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
RN7SL28P-201ENST00000488836 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
RN7SL28P-201ENST00000488836 RTCBQ9Y3I0 505 aaKnown RBP11.75□□□□□ -0.53
RN7SL28P-201ENST00000488836 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
RN7SL28P-201ENST00000488836 TGFB2P61812 414 aa11.74□□□□□ -0.53
RN7SL28P-201ENST00000488836 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
RN7SL28P-201ENST00000488836 POLKQ9UBT6 870 aa11.74□□□□□ -0.53
RN7SL28P-201ENST00000488836 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
RN7SL28P-201ENST00000488836 MMP10P09238 476 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 HSPA6P17066 643 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 ITPK1Q13572 414 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
RN7SL28P-201ENST00000488836 CICQ96RK0 1608 aaPredicted RBP11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 AMOTQ4VCS5 1084 aa11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
RN7SL28P-201ENST00000488836 KDRP35968 1356 aa11.71□□□□□ -0.53
RN7SL28P-201ENST00000488836 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.53
RN7SL28P-201ENST00000488836 RFC4P35249 363 aa11.71□□□□□ -0.53
RN7SL28P-201ENST00000488836 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
RN7SL28P-201ENST00000488836 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
RN7SL28P-201ENST00000488836 KIF13BQ9NQT8 1826 aa11.71□□□□□ -0.54
RN7SL28P-201ENST00000488836 CABP4P57796 275 aa11.7□□□□□ -0.54
RN7SL28P-201ENST00000488836 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
RN7SL28P-201ENST00000488836 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
RN7SL28P-201ENST00000488836 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 TNNT2P45379 298 aaPredicted RBP11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 C1orf141Q5JVX7 400 aa11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
RN7SL28P-201ENST00000488836 MTHFSP49914 203 aa11.68□□□□□ -0.54
RN7SL28P-201ENST00000488836 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
RN7SL28P-201ENST00000488836 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
RN7SL28P-201ENST00000488836 C4AP0C0L4 1744 aa11.68□□□□□ -0.54
RN7SL28P-201ENST00000488836 TOMM70O94826 608 aa11.67□□□□□ -0.54
RN7SL28P-201ENST00000488836 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
RN7SL28P-201ENST00000488836 APLP1P51693 650 aa11.67□□□□□ -0.54
RN7SL28P-201ENST00000488836 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
RN7SL28P-201ENST00000488836 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
RN7SL28P-201ENST00000488836 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
RN7SL28P-201ENST00000488836 KIF3CO14782 793 aa11.66□□□□□ -0.54
RN7SL28P-201ENST00000488836 FCHSD2O94868 740 aa11.66□□□□□ -0.54
RN7SL28P-201ENST00000488836 GYS1P13807 737 aa11.66□□□□□ -0.54
RN7SL28P-201ENST00000488836 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
RN7SL28P-201ENST00000488836 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
RN7SL28P-201ENST00000488836 MORC1Q86VD1 984 aa11.65□□□□□ -0.54
RN7SL28P-201ENST00000488836 SLC4A9Q96Q91 983 aa11.65□□□□□ -0.54
RN7SL28P-201ENST00000488836 PANK3Q9H999 370 aa11.65□□□□□ -0.54
RN7SL28P-201ENST00000488836 PIM2Q9P1W9 311 aa11.65□□□□□ -0.54
RN7SL28P-201ENST00000488836 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
RN7SL28P-201ENST00000488836 PTCD1O75127 700 aaKnown RBP11.64□□□□□ -0.55
RN7SL28P-201ENST00000488836 DPEP1P16444 411 aa11.64□□□□□ -0.55
RN7SL28P-201ENST00000488836 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
RN7SL28P-201ENST00000488836 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
RN7SL28P-201ENST00000488836 BRCA1P38398 1863 aaKnown RBP11.63□□□□□ -0.55
RN7SL28P-201ENST00000488836 ARFGEF1Q9Y6D6 1849 aa11.63□□□□□ -0.55
RN7SL28P-201ENST00000488836 CRKLP46109 303 aaKnown RBP11.63□□□□□ -0.55
RN7SL28P-201ENST00000488836 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
RN7SL28P-201ENST00000488836 KNSTRNQ9Y448 316 aa11.63□□□□□ -0.55
RN7SL28P-201ENST00000488836 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
RN7SL28P-201ENST00000488836 USP42Q9H9J4 1324 aaKnown RBP11.62□□□□□ -0.55
RN7SL28P-201ENST00000488836 ZPR1O75312 459 aa11.62□□□□□ -0.55
RN7SL28P-201ENST00000488836 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
RN7SL28P-201ENST00000488836 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
RN7SL28P-201ENST00000488836 AKAP4Q5JQC9 854 aa11.61□□□□□ -0.55
RN7SL28P-201ENST00000488836 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
RN7SL28P-201ENST00000488836 RBM46Q8TBY0 533 aaKnown RBP11.61□□□□□ -0.55
RN7SL28P-201ENST00000488836 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
RN7SL28P-201ENST00000488836 HSPA5P11021 654 aaKnown RBP11.6□□□□□ -0.55
RN7SL28P-201ENST00000488836 FSTL1Q12841 308 aa11.6□□□□□ -0.55
RN7SL28P-201ENST00000488836 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
RN7SL28P-201ENST00000488836 ZC3H4Q9UPT8 1303 aaKnown RBP11.6□□□□□ -0.55
RN7SL28P-201ENST00000488836 KCNA3P22001 575 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 IL13P35225 146 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 FKBP8Q14318 412 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 PCGF6Q9BYE7 350 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 SLC52A2Q9HAB3 445 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 NMRK2Q9NPI5 230 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 TJP1Q07157 1748 aa11.59□□□□□ -0.55
RN7SL28P-201ENST00000488836 INTS5Q6P9B9 1019 aaKnown RBP11.58□□□□□ -0.56
RN7SL28P-201ENST00000488836 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
RN7SL28P-201ENST00000488836 RNF181Q9P0P0 153 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms