RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-207ENST00000488753 MTHFSP49914 203 aa17.75■□□□□ 0.43
ATPAF2-207ENST00000488753 GPR162Q16538 588 aa17.75■□□□□ 0.43
ATPAF2-207ENST00000488753 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
ATPAF2-207ENST00000488753 KDM6AO15550 1401 aaPredicted RBP17.74■□□□□ 0.43
ATPAF2-207ENST00000488753 ITPK1Q13572 414 aa17.74■□□□□ 0.43
ATPAF2-207ENST00000488753 MSL1Q68DK7 614 aa17.74■□□□□ 0.43
ATPAF2-207ENST00000488753 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
ATPAF2-207ENST00000488753 GOLGB1Q14789 3259 aaKnown RBP17.74■□□□□ 0.43
ATPAF2-207ENST00000488753 CABP4P57796 275 aa17.73■□□□□ 0.43
ATPAF2-207ENST00000488753 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
ATPAF2-207ENST00000488753 GNPATO15228 680 aa17.72■□□□□ 0.43
ATPAF2-207ENST00000488753 PHF14O94880 888 aa17.72■□□□□ 0.43
ATPAF2-207ENST00000488753 NLGN2Q8NFZ4 835 aa17.72■□□□□ 0.43
ATPAF2-207ENST00000488753 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
ATPAF2-207ENST00000488753 ZNF831Q5JPB2 1677 aa17.71■□□□□ 0.42
ATPAF2-207ENST00000488753 UBR3Q6ZT12 1888 aa17.7■□□□□ 0.42
ATPAF2-207ENST00000488753 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
ATPAF2-207ENST00000488753 RC3H1Q5TC82 1133 aaKnown RBP17.7■□□□□ 0.42
ATPAF2-207ENST00000488753 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
ATPAF2-207ENST00000488753 ADRA2BP18089 450 aa17.69■□□□□ 0.42
ATPAF2-207ENST00000488753 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
ATPAF2-207ENST00000488753 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
ATPAF2-207ENST00000488753 CNTNAP4Q9C0A0 1308 aa17.69■□□□□ 0.42
ATPAF2-207ENST00000488753 GRIN3BO60391 1043 aa17.68■□□□□ 0.42
ATPAF2-207ENST00000488753 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-207ENST00000488753 RTCBQ9Y3I0 505 aaKnown RBP17.68■□□□□ 0.42
ATPAF2-207ENST00000488753 TRAPPC3LQ5T215 181 aa17.67■□□□□ 0.42
ATPAF2-207ENST00000488753 SMIM5Q71RC9 77 aa17.67■□□□□ 0.42
ATPAF2-207ENST00000488753 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
ATPAF2-207ENST00000488753 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
ATPAF2-207ENST00000488753 RPS6KA4O75676 772 aa17.65■□□□□ 0.42
ATPAF2-207ENST00000488753 HMOX1P09601 288 aa17.65■□□□□ 0.42
ATPAF2-207ENST00000488753 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
ATPAF2-207ENST00000488753 YBX3P16989 372 aaKnown RBP eCLIP17.64■□□□□ 0.41
ATPAF2-207ENST00000488753 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
ATPAF2-207ENST00000488753 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
ATPAF2-207ENST00000488753 CHD4Q14839 1912 aa17.63■□□□□ 0.41
ATPAF2-207ENST00000488753 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
ATPAF2-207ENST00000488753 MRC1P22897 1456 aa17.63■□□□□ 0.41
ATPAF2-207ENST00000488753 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-207ENST00000488753 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
ATPAF2-207ENST00000488753 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
ATPAF2-207ENST00000488753 MMP10P09238 476 aa17.61■□□□□ 0.41
ATPAF2-207ENST00000488753 RFC4P35249 363 aa17.61■□□□□ 0.41
ATPAF2-207ENST00000488753 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
ATPAF2-207ENST00000488753 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-207ENST00000488753 COL5A3P25940 1745 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-207ENST00000488753 CRKLP46109 303 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-207ENST00000488753 SCN11AQ9UI33 1791 aa17.6■□□□□ 0.41
ATPAF2-207ENST00000488753 GYS1P13807 737 aa17.59■□□□□ 0.41
ATPAF2-207ENST00000488753 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
ATPAF2-207ENST00000488753 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.4
ATPAF2-207ENST00000488753 CFAP53Q96M91 514 aa17.58■□□□□ 0.4
ATPAF2-207ENST00000488753 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.4
ATPAF2-207ENST00000488753 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
ATPAF2-207ENST00000488753 TGFB2P61812 414 aa17.56■□□□□ 0.4
ATPAF2-207ENST00000488753 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-207ENST00000488753 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-207ENST00000488753 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-207ENST00000488753 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
ATPAF2-207ENST00000488753 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
ATPAF2-207ENST00000488753 TJP1Q07157 1748 aa17.55■□□□□ 0.4
ATPAF2-207ENST00000488753 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
ATPAF2-207ENST00000488753 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-207ENST00000488753 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-207ENST00000488753 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
ATPAF2-207ENST00000488753 DNAJC10Q8IXB1 793 aa17.54■□□□□ 0.4
ATPAF2-207ENST00000488753 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
ATPAF2-207ENST00000488753 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
ATPAF2-207ENST00000488753 PXDNLA1KZ92 1463 aa17.53■□□□□ 0.4
ATPAF2-207ENST00000488753 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
ATPAF2-207ENST00000488753 SOS1Q07889 1333 aaPredicted RBP17.52■□□□□ 0.4
ATPAF2-207ENST00000488753 PPP2R1AP30153 589 aa17.52■□□□□ 0.4
ATPAF2-207ENST00000488753 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
ATPAF2-207ENST00000488753 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
ATPAF2-207ENST00000488753 TEFQ10587 303 aa17.51■□□□□ 0.39
ATPAF2-207ENST00000488753 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
ATPAF2-207ENST00000488753 RSPH6AQ9H0K4 717 aa17.51■□□□□ 0.39
ATPAF2-207ENST00000488753 SRP68Q9UHB9 627 aaKnown RBP17.51■□□□□ 0.39
ATPAF2-207ENST00000488753 KIF13BQ9NQT8 1826 aa17.5■□□□□ 0.39
ATPAF2-207ENST00000488753 ZPR1O75312 459 aa17.5■□□□□ 0.39
ATPAF2-207ENST00000488753 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
ATPAF2-207ENST00000488753 FKBP8Q14318 412 aa17.5■□□□□ 0.39
ATPAF2-207ENST00000488753 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
ATPAF2-207ENST00000488753 C1QTNF8P60827 252 aa17.49■□□□□ 0.39
ATPAF2-207ENST00000488753 ADCY9O60503 1353 aa17.49■□□□□ 0.39
ATPAF2-207ENST00000488753 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 FCHSD2O94868 740 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 STARD3NLO95772 234 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 TM4SF1P30408 202 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 PHACTR3Q96KR7 559 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
ATPAF2-207ENST00000488753 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 DDR1Q08345 913 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms