RNA–Protein interactions for RNA: ENST00000488702.1

TRAF3IP3-216, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 5

Gene TRAF3IP3, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-216ENST00000488702 DBN1Q16643 649 aa8.94□□□□□ -0.98
TRAF3IP3-216ENST00000488702 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
TRAF3IP3-216ENST00000488702 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
TRAF3IP3-216ENST00000488702 CNTNAP3BQ96NU0 1288 aa8.94□□□□□ -0.98
TRAF3IP3-216ENST00000488702 CNTNAP3Q9BZ76 1288 aa8.94□□□□□ -0.98
TRAF3IP3-216ENST00000488702 USP17L5A8MUK1 530 aa8.93□□□□□ -0.98
TRAF3IP3-216ENST00000488702 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
TRAF3IP3-216ENST00000488702 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GAS2L1Q99501 681 aaPredicted RBP8.93□□□□□ -0.98
TRAF3IP3-216ENST00000488702 NOD1Q9Y239 953 aa8.93□□□□□ -0.98
TRAF3IP3-216ENST00000488702 F11P03951 625 aa8.92□□□□□ -0.98
TRAF3IP3-216ENST00000488702 TLR1Q15399 786 aa8.92□□□□□ -0.98
TRAF3IP3-216ENST00000488702 C4orf17Q53FE4 359 aa8.92□□□□□ -0.98
TRAF3IP3-216ENST00000488702 RIPOR1Q6ZS17 1223 aa8.92□□□□□ -0.98
TRAF3IP3-216ENST00000488702 RHBDD1Q8TEB9 315 aa8.92□□□□□ -0.98
TRAF3IP3-216ENST00000488702 SLC4A9Q96Q91 983 aa8.92□□□□□ -0.98
TRAF3IP3-216ENST00000488702 H7C1W4 665 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 PHKA2P46019 1235 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 SMTNP53814 917 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 PLEKHM2Q8IWE5 1019 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
TRAF3IP3-216ENST00000488702 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
TRAF3IP3-216ENST00000488702 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.98
TRAF3IP3-216ENST00000488702 ATP9BO43861 1147 aa8.9□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GTF2IP78347 998 aa8.9□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GAS6Q14393 721 aa8.9□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GLMNQ92990 594 aa8.9□□□□□ -0.98
TRAF3IP3-216ENST00000488702 SLURP2P0DP57 97 aa8.89□□□□□ -0.99
TRAF3IP3-216ENST00000488702 MTFR1Q15390 333 aa8.89□□□□□ -0.99
TRAF3IP3-216ENST00000488702 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
TRAF3IP3-216ENST00000488702 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 THBS1P07996 1170 aa8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 USP17L2Q6R6M4 530 aa8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
TRAF3IP3-216ENST00000488702 A6NJY4 79 aa8.87□□□□□ -0.99
TRAF3IP3-216ENST00000488702 CDK2AP1O14519 115 aa8.87□□□□□ -0.99
TRAF3IP3-216ENST00000488702 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
TRAF3IP3-216ENST00000488702 GTPBP3Q969Y2 492 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP3-216ENST00000488702 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP3-216ENST00000488702 GPR25O00155 361 aa8.86□□□□□ -0.99
TRAF3IP3-216ENST00000488702 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP3-216ENST00000488702 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
TRAF3IP3-216ENST00000488702 NIFKQ9BYG3 293 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP3-216ENST00000488702 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
TRAF3IP3-216ENST00000488702 BACH1O14867 736 aa8.85□□□□□ -0.99
TRAF3IP3-216ENST00000488702 MSX1P28360 303 aa8.85□□□□□ -0.99
TRAF3IP3-216ENST00000488702 CLDN10P78369 228 aa8.85□□□□□ -0.99
TRAF3IP3-216ENST00000488702 SRSF11Q05519 484 aaKnown RBP8.85□□□□□ -0.99
TRAF3IP3-216ENST00000488702 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRAF3IP3-216ENST00000488702 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 PSME1Q06323 249 aa8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 UBAP2LQ14157 1087 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 LBRQ14739 615 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 MBIPQ9NS73 344 aa8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 ZNF358Q9NW07 568 aa8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 TFIP11Q9UBB9 837 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 USP3Q9Y6I4 520 aa8.84□□□□□ -0.99
TRAF3IP3-216ENST00000488702 ADAMTS2O95450 1211 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 ATP1A2P50993 1020 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 EPHA4P54764 986 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 ZNF385CQ66K41 422 aaPredicted RBP8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 WHAMMQ8TF30 809 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 TRERF1Q96PN7 1200 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 CRISPLD1Q9H336 500 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 RUBCNLQ9H714 662 aa8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 MAFBQ9Y5Q3 323 aaPredicted RBP8.83□□□□□ -1
TRAF3IP3-216ENST00000488702 CSB-PGBD3P0DP91 1061 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 ATP4AP20648 1035 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 CCDC102BQ68D86 513 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 PGBD3Q8N328 593 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 OGFOD1Q8N543 542 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 C1orf216Q8TAB5 229 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
TRAF3IP3-216ENST00000488702 PALM3A6NDB9 673 aaPredicted RBP8.81□□□□□ -1
TRAF3IP3-216ENST00000488702 FOXK2Q01167 660 aa8.81□□□□□ -1
TRAF3IP3-216ENST00000488702 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
TRAF3IP3-216ENST00000488702 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
TRAF3IP3-216ENST00000488702 PPP1R12CQ9BZL4 782 aa8.81□□□□□ -1
TRAF3IP3-216ENST00000488702 DNAAF2Q9NVR5 837 aaKnown RBP8.81□□□□□ -1
TRAF3IP3-216ENST00000488702 DKK1O94907 266 aa8.8□□□□□ -1
TRAF3IP3-216ENST00000488702 EFHC2Q5JST6 749 aa8.8□□□□□ -1
TRAF3IP3-216ENST00000488702 SIX5Q8N196 739 aa8.8□□□□□ -1
TRAF3IP3-216ENST00000488702 AIDAQ96BJ3 306 aa8.8□□□□□ -1
TRAF3IP3-216ENST00000488702 CABP1Q9NZU7 370 aa8.8□□□□□ -1
TRAF3IP3-216ENST00000488702 IGF1RP08069 1367 aa8.79□□□□□ -1
TRAF3IP3-216ENST00000488702 TNS4Q8IZW8 715 aa8.79□□□□□ -1
TRAF3IP3-216ENST00000488702 SVOPQ8N4V2 548 aa8.79□□□□□ -1
TRAF3IP3-216ENST00000488702 M0R2N6 131 aa8.78□□□□□ -1
TRAF3IP3-216ENST00000488702 ARHGEF15O94989 841 aa8.78□□□□□ -1
TRAF3IP3-216ENST00000488702 MX2P20592 715 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms