RNA–Protein interactions for RNA: ENST00000488672.1

GGA1-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-221ENST00000488672 IFNL2Q8IZJ0 200 aa10.65□□□□□ -0.7
GGA1-221ENST00000488672 LINC00116Q8NCU8 138 aa10.65□□□□□ -0.7
GGA1-221ENST00000488672 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
GGA1-221ENST00000488672 GNPATO15228 680 aa10.64□□□□□ -0.71
GGA1-221ENST00000488672 PPM1GO15355 546 aaPredicted RBP10.64□□□□□ -0.71
GGA1-221ENST00000488672 POLKQ9UBT6 870 aa10.64□□□□□ -0.71
GGA1-221ENST00000488672 PXDNLA1KZ92 1463 aa10.63□□□□□ -0.71
GGA1-221ENST00000488672 ATP6V1AP38606 617 aa10.63□□□□□ -0.71
GGA1-221ENST00000488672 ITPK1Q13572 414 aa10.63□□□□□ -0.71
GGA1-221ENST00000488672 ASAP1Q9ULH1 1129 aa10.63□□□□□ -0.71
GGA1-221ENST00000488672 C10orf71Q711Q0 1435 aa10.63□□□□□ -0.71
GGA1-221ENST00000488672 SBF1O95248 1867 aa10.63□□□□□ -0.71
GGA1-221ENST00000488672 TJP1Q07157 1748 aa10.62□□□□□ -0.71
GGA1-221ENST00000488672 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
GGA1-221ENST00000488672 HSPA6P17066 643 aa10.62□□□□□ -0.71
GGA1-221ENST00000488672 ADRA2BP18089 450 aa10.62□□□□□ -0.71
GGA1-221ENST00000488672 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
GGA1-221ENST00000488672 CNTNAP4Q9C0A0 1308 aa10.61□□□□□ -0.71
GGA1-221ENST00000488672 CLSPNQ9HAW4 1339 aa10.61□□□□□ -0.71
GGA1-221ENST00000488672 ERVV-2B6SEH9 535 aa10.61□□□□□ -0.71
GGA1-221ENST00000488672 MMP10P09238 476 aa10.61□□□□□ -0.71
GGA1-221ENST00000488672 EIF4A2Q14240 407 aaKnown RBP10.61□□□□□ -0.71
GGA1-221ENST00000488672 RC3H1Q5TC82 1133 aaKnown RBP10.61□□□□□ -0.71
GGA1-221ENST00000488672 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
GGA1-221ENST00000488672 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
GGA1-221ENST00000488672 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
GGA1-221ENST00000488672 TGFB2P61812 414 aa10.6□□□□□ -0.71
GGA1-221ENST00000488672 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
GGA1-221ENST00000488672 NLGN1Q8N2Q7 840 aa10.6□□□□□ -0.71
GGA1-221ENST00000488672 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
GGA1-221ENST00000488672 DLEC1Q9Y238 1755 aa10.6□□□□□ -0.71
GGA1-221ENST00000488672 KDM6AO15550 1401 aaPredicted RBP10.59□□□□□ -0.71
GGA1-221ENST00000488672 WDR90Q96KV7 1748 aa10.59□□□□□ -0.71
GGA1-221ENST00000488672 AFDNP55196 1824 aaKnown RBP10.59□□□□□ -0.71
GGA1-221ENST00000488672 KIF3CO14782 793 aa10.59□□□□□ -0.71
GGA1-221ENST00000488672 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
GGA1-221ENST00000488672 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
GGA1-221ENST00000488672 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
GGA1-221ENST00000488672 TNRC6CQ9HCJ0 1690 aaKnown RBP10.59□□□□□ -0.71
GGA1-221ENST00000488672 CCDC88AQ3V6T2 1871 aa10.58□□□□□ -0.72
GGA1-221ENST00000488672 RPS6KA4O75676 772 aa10.58□□□□□ -0.72
GGA1-221ENST00000488672 AMOTQ4VCS5 1084 aa10.58□□□□□ -0.72
GGA1-221ENST00000488672 SLC4A9Q96Q91 983 aa10.58□□□□□ -0.72
GGA1-221ENST00000488672 CCDC87Q9NVE4 849 aa10.58□□□□□ -0.72
GGA1-221ENST00000488672 GYS1P13807 737 aa10.57□□□□□ -0.72
GGA1-221ENST00000488672 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
GGA1-221ENST00000488672 ARHGEF1Q92888 912 aaKnown RBP10.57□□□□□ -0.72
GGA1-221ENST00000488672 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
GGA1-221ENST00000488672 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
GGA1-221ENST00000488672 RFC4P35249 363 aa10.56□□□□□ -0.72
GGA1-221ENST00000488672 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
GGA1-221ENST00000488672 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
GGA1-221ENST00000488672 BCS1LQ9Y276 419 aa10.56□□□□□ -0.72
GGA1-221ENST00000488672 UBR2Q8IWV8 1755 aa10.56□□□□□ -0.72
GGA1-221ENST00000488672 MRC1P22897 1456 aa10.55□□□□□ -0.72
GGA1-221ENST00000488672 TOMM70O94826 608 aa10.55□□□□□ -0.72
GGA1-221ENST00000488672 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
GGA1-221ENST00000488672 APLP1P51693 650 aa10.55□□□□□ -0.72
GGA1-221ENST00000488672 CABP4P57796 275 aa10.55□□□□□ -0.72
GGA1-221ENST00000488672 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
GGA1-221ENST00000488672 A0A0G2JLW4 131 aa10.54□□□□□ -0.72
GGA1-221ENST00000488672 CRKLP46109 303 aaKnown RBP10.54□□□□□ -0.72
GGA1-221ENST00000488672 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
GGA1-221ENST00000488672 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
GGA1-221ENST00000488672 USP42Q9H9J4 1324 aaKnown RBP10.54□□□□□ -0.72
GGA1-221ENST00000488672 FCHSD2O94868 740 aa10.53□□□□□ -0.72
GGA1-221ENST00000488672 DPEP1P16444 411 aa10.53□□□□□ -0.72
GGA1-221ENST00000488672 MTHFSP49914 203 aa10.53□□□□□ -0.72
GGA1-221ENST00000488672 EIF4G2P78344 907 aaKnown RBP eCLIP10.53□□□□□ -0.72
GGA1-221ENST00000488672 ARHGAP27Q6ZUM4 889 aa10.52□□□□□ -0.73
GGA1-221ENST00000488672 POLR3GLQ9BT43 218 aa10.52□□□□□ -0.73
GGA1-221ENST00000488672 PANK3Q9H999 370 aa10.52□□□□□ -0.73
GGA1-221ENST00000488672 PIM2Q9P1W9 311 aa10.52□□□□□ -0.73
GGA1-221ENST00000488672 TIAM2Q8IVF5 1701 aa10.52□□□□□ -0.73
GGA1-221ENST00000488672 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
GGA1-221ENST00000488672 KCNA3P22001 575 aa10.51□□□□□ -0.73
GGA1-221ENST00000488672 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
GGA1-221ENST00000488672 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
GGA1-221ENST00000488672 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
GGA1-221ENST00000488672 SIPA1L3O60292 1781 aaPredicted RBP10.51□□□□□ -0.73
GGA1-221ENST00000488672 KCPQ6ZWJ8 1503 aa10.5□□□□□ -0.73
GGA1-221ENST00000488672 SULT6B1Q6IMI4 303 aa10.5□□□□□ -0.73
GGA1-221ENST00000488672 MORC1Q86VD1 984 aa10.5□□□□□ -0.73
GGA1-221ENST00000488672 NMRK2Q9NPI5 230 aa10.5□□□□□ -0.73
GGA1-221ENST00000488672 ANKRD31Q8N7Z5 1873 aa10.5□□□□□ -0.73
GGA1-221ENST00000488672 ZC3H4Q9UPT8 1303 aaKnown RBP10.5□□□□□ -0.73
GGA1-221ENST00000488672 SCN7AQ01118 1682 aa10.5□□□□□ -0.73
GGA1-221ENST00000488672 FER1L6Q2WGJ9 1857 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
GGA1-221ENST00000488672 IL13P35225 146 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 DDR1Q08345 913 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 FKBP8Q14318 412 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 DALRD3Q5D0E6 543 aaKnown RBP10.49□□□□□ -0.73
GGA1-221ENST00000488672 AKAP4Q5JQC9 854 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 C9orf131Q5VYM1 1079 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 SRP68Q9UHB9 627 aaKnown RBP10.49□□□□□ -0.73
GGA1-221ENST00000488672 KDM2BQ8NHM5 1336 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 ARFGEF2Q9Y6D5 1785 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 CACNA1SQ13698 1873 aa10.49□□□□□ -0.73
GGA1-221ENST00000488672 POLRMTO00411 1230 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms