RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
SUPT20H-218ENST00000488590 GNPATO15228 680 aa13.44□□□□□ -0.26
SUPT20H-218ENST00000488590 SMARCC1Q92922 1105 aaPredicted RBP13.44□□□□□ -0.26
SUPT20H-218ENST00000488590 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
SUPT20H-218ENST00000488590 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 SIK1P57059 783 aa13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 DALRD3Q5D0E6 543 aaKnown RBP13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 PIGBQ92521 554 aa13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
SUPT20H-218ENST00000488590 CYP27B1O15528 508 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 GYS1P13807 737 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 VEGFBP49765 207 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 TMF1P82094 1093 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 RASSF7Q02833 373 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
SUPT20H-218ENST00000488590 CGNL1Q0VF96 1302 aa13.41□□□□□ -0.26
SUPT20H-218ENST00000488590 ITGB4P16144 1822 aa13.41□□□□□ -0.26
SUPT20H-218ENST00000488590 CCDC85CA6NKD9 419 aa13.41□□□□□ -0.26
SUPT20H-218ENST00000488590 HOXC9P31274 260 aa13.41□□□□□ -0.26
SUPT20H-218ENST00000488590 AIDAQ96BJ3 306 aa13.41□□□□□ -0.26
SUPT20H-218ENST00000488590 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
SUPT20H-218ENST00000488590 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
SUPT20H-218ENST00000488590 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
SUPT20H-218ENST00000488590 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
SUPT20H-218ENST00000488590 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
SUPT20H-218ENST00000488590 FBLN1P23142 703 aa13.39□□□□□ -0.27
SUPT20H-218ENST00000488590 CHRNA5P30532 468 aa13.39□□□□□ -0.27
SUPT20H-218ENST00000488590 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
SUPT20H-218ENST00000488590 LMNB1P20700 586 aa13.38□□□□□ -0.27
SUPT20H-218ENST00000488590 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
SUPT20H-218ENST00000488590 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
SUPT20H-218ENST00000488590 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
SUPT20H-218ENST00000488590 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
SUPT20H-218ENST00000488590 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
SUPT20H-218ENST00000488590 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
SUPT20H-218ENST00000488590 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
SUPT20H-218ENST00000488590 PARP3Q9Y6F1 533 aa13.36□□□□□ -0.27
SUPT20H-218ENST00000488590 EDC4Q6P2E9 1401 aaKnown RBP13.36□□□□□ -0.27
SUPT20H-218ENST00000488590 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
SUPT20H-218ENST00000488590 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
SUPT20H-218ENST00000488590 DDR1Q08345 913 aa13.35□□□□□ -0.27
SUPT20H-218ENST00000488590 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
SUPT20H-218ENST00000488590 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
SUPT20H-218ENST00000488590 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
SUPT20H-218ENST00000488590 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
SUPT20H-218ENST00000488590 KDRP35968 1356 aa13.34□□□□□ -0.27
SUPT20H-218ENST00000488590 NFKBIEO00221 500 aa13.34□□□□□ -0.27
SUPT20H-218ENST00000488590 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
SUPT20H-218ENST00000488590 ADRA2BP18089 450 aa13.33□□□□□ -0.28
SUPT20H-218ENST00000488590 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
SUPT20H-218ENST00000488590 SLC12A5Q9H2X9 1139 aa13.32□□□□□ -0.28
SUPT20H-218ENST00000488590 ATG3Q9NT62 314 aa13.32□□□□□ -0.28
SUPT20H-218ENST00000488590 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
SUPT20H-218ENST00000488590 AMPHP49418 695 aa13.31□□□□□ -0.28
SUPT20H-218ENST00000488590 FKBP8Q14318 412 aa13.31□□□□□ -0.28
SUPT20H-218ENST00000488590 RC3H1Q5TC82 1133 aaKnown RBP13.31□□□□□ -0.28
SUPT20H-218ENST00000488590 A0A1W2PP64 1363 aa13.31□□□□□ -0.28
SUPT20H-218ENST00000488590 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
SUPT20H-218ENST00000488590 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
SUPT20H-218ENST00000488590 RFC4P35249 363 aa13.3□□□□□ -0.28
SUPT20H-218ENST00000488590 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
SUPT20H-218ENST00000488590 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
SUPT20H-218ENST00000488590 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
SUPT20H-218ENST00000488590 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
SUPT20H-218ENST00000488590 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
SUPT20H-218ENST00000488590 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 TM4SF1P30408 202 aa13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 MYH14Q7Z406 1995 aaKnown RBP13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
SUPT20H-218ENST00000488590 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.29
SUPT20H-218ENST00000488590 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.29
SUPT20H-218ENST00000488590 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
SUPT20H-218ENST00000488590 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.29
SUPT20H-218ENST00000488590 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
SUPT20H-218ENST00000488590 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
SUPT20H-218ENST00000488590 LDHDQ86WU2 507 aa13.26□□□□□ -0.29
SUPT20H-218ENST00000488590 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
SUPT20H-218ENST00000488590 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
SUPT20H-218ENST00000488590 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
SUPT20H-218ENST00000488590 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
SUPT20H-218ENST00000488590 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
SUPT20H-218ENST00000488590 TMC1Q8TDI8 760 aa13.25□□□□□ -0.29
SUPT20H-218ENST00000488590 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
SUPT20H-218ENST00000488590 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
SUPT20H-218ENST00000488590 INSRP06213 1382 aa13.24□□□□□ -0.29
SUPT20H-218ENST00000488590 COG3Q96JB2 828 aa13.24□□□□□ -0.29
SUPT20H-218ENST00000488590 TAF1DQ9H5J8 278 aaPredicted RBP13.24□□□□□ -0.29
SUPT20H-218ENST00000488590 ADAMTSL1Q8N6G6 1762 aa13.24□□□□□ -0.29
SUPT20H-218ENST00000488590 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
SUPT20H-218ENST00000488590 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
SUPT20H-218ENST00000488590 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
SUPT20H-218ENST00000488590 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
SUPT20H-218ENST00000488590 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
SUPT20H-218ENST00000488590 LTBP1Q14766 1721 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms