RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
ITGB1-214ENST00000488427 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
ITGB1-214ENST00000488427 KRT76Q01546 638 aa8.41□□□□□ -1.06
ITGB1-214ENST00000488427 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
ITGB1-214ENST00000488427 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
ITGB1-214ENST00000488427 ZNF395Q9H8N7 513 aaPredicted RBP8.41□□□□□ -1.06
ITGB1-214ENST00000488427 RFX1P22670 979 aa8.4□□□□□ -1.06
ITGB1-214ENST00000488427 RNF144AP50876 292 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-214ENST00000488427 GDF10P55107 478 aa8.4□□□□□ -1.06
ITGB1-214ENST00000488427 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
ITGB1-214ENST00000488427 TMEM151AQ8N4L1 468 aa8.4□□□□□ -1.06
ITGB1-214ENST00000488427 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
ITGB1-214ENST00000488427 CNKSR1Q969H4 720 aa8.4□□□□□ -1.06
ITGB1-214ENST00000488427 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
ITGB1-214ENST00000488427 INSM2Q96T92 566 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-214ENST00000488427 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-214ENST00000488427 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
ITGB1-214ENST00000488427 SUPT5HO00267 1087 aaKnown RBP8.39□□□□□ -1.07
ITGB1-214ENST00000488427 INHAP05111 366 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 GSK3AP49840 483 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
ITGB1-214ENST00000488427 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 SIX5Q8N196 739 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 CCDC155Q8N6L0 562 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 ADAMTS8Q9UP79 889 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 PCDHGA11Q9Y5H2 935 aa8.39□□□□□ -1.07
ITGB1-214ENST00000488427 GDF11O95390 407 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 RASSF7Q02833 373 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 TLR1Q15399 786 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 TPCN2Q8NHX9 752 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 XAGE2Q96GT9 111 aa8.38□□□□□ -1.07
ITGB1-214ENST00000488427 M0R2N6 131 aa8.37□□□□□ -1.07
ITGB1-214ENST00000488427 SEC13P55735 322 aa8.37□□□□□ -1.07
ITGB1-214ENST00000488427 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
ITGB1-214ENST00000488427 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
ITGB1-214ENST00000488427 ZSCAN10Q96SZ4 725 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-214ENST00000488427 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
ITGB1-214ENST00000488427 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L15C9J2P7 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L13C9JLJ4 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L12C9JPN9 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L11C9JVI0 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L21D6R901 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L18D6R9N7 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L22D6RA61 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L17D6RBQ6 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L19D6RCP7 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L20D6RJB6 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 USP17L24Q0WX57 530 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 WDR44Q5JSH3 913 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 ZNF594Q96JF6 807 aaPredicted RBP8.36□□□□□ -1.07
ITGB1-214ENST00000488427 ETNK1Q9HBU6 452 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 RAB6BQ9NRW1 208 aa8.36□□□□□ -1.07
ITGB1-214ENST00000488427 CDC14CA4D256 554 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 IL2RAP01589 272 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 ITGA6P23229 1130 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 CTSOP43234 321 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-214ENST00000488427 SCNN1DP51172 638 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 CLDN10P78369 228 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 CENPCQ03188 943 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 PDE4CQ08493 712 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 KANK4Q5T7N3 995 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-214ENST00000488427 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-214ENST00000488427 RNF217Q8TC41 542 aa8.35□□□□□ -1.07
ITGB1-214ENST00000488427 ATG7O95352 703 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 SMTNP53814 917 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 ELOAQ14241 798 aaKnown RBP8.34□□□□□ -1.07
ITGB1-214ENST00000488427 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 ZNF385CQ66K41 422 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-214ENST00000488427 SV2AQ7L0J3 742 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 TAS1R3Q7RTX0 852 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 ANKMY2Q8IV38 441 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
ITGB1-214ENST00000488427 PTK7Q13308 1070 aa8.33□□□□□ -1.08
ITGB1-214ENST00000488427 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
ITGB1-214ENST00000488427 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
ITGB1-214ENST00000488427 ZNF358Q9NW07 568 aa8.33□□□□□ -1.08
ITGB1-214ENST00000488427 A6NJY4 79 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 TMEM229AB2RXF0 380 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 SPATA31C2B4DYI2 1134 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 CDK2AP1O14519 115 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-214ENST00000488427 PPARGC1BQ86YN6 1023 aaKnown RBP8.32□□□□□ -1.08
ITGB1-214ENST00000488427 NIFKQ9BYG3 293 aaKnown RBP8.32□□□□□ -1.08
ITGB1-214ENST00000488427 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 SERTAD1Q9UHV2 236 aa8.32□□□□□ -1.08
ITGB1-214ENST00000488427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-214ENST00000488427 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
ITGB1-214ENST00000488427 CSB-PGBD3P0DP91 1061 aa8.31□□□□□ -1.08
ITGB1-214ENST00000488427 DPYDQ12882 1025 aa8.31□□□□□ -1.08
ITGB1-214ENST00000488427 CRTC2Q53ET0 693 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-214ENST00000488427 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
ITGB1-214ENST00000488427 ARID3AQ99856 593 aa8.31□□□□□ -1.08
ITGB1-214ENST00000488427 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
ITGB1-214ENST00000488427 HRH3Q9Y5N1 445 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms