RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 MAP2P11137 1827 aaKnown RBP15.11■□□□□ 0.01
LCN2-206ENST00000488391 TMF1P82094 1093 aa15.11■□□□□ 0.01
LCN2-206ENST00000488391 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
LCN2-206ENST00000488391 TGFB2P61812 414 aa15.1■□□□□ 0.01
LCN2-206ENST00000488391 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
LCN2-206ENST00000488391 N4BP2Q86UW6 1770 aaPredicted RBP15.1■□□□□ 0.01
LCN2-206ENST00000488391 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
LCN2-206ENST00000488391 DPEP1P16444 411 aa15.09■□□□□ 0.01
LCN2-206ENST00000488391 NLGN1Q8N2Q7 840 aa15.09■□□□□ 0.01
LCN2-206ENST00000488391 EYA1Q99502 592 aa15.09■□□□□ 0.01
LCN2-206ENST00000488391 CARD14Q9BXL6 1004 aa15.09■□□□□ 0.01
LCN2-206ENST00000488391 RTCBQ9Y3I0 505 aaKnown RBP15.09■□□□□ 0.01
LCN2-206ENST00000488391 KIF24Q5T7B8 1368 aa15.09■□□□□ 0.01
LCN2-206ENST00000488391 FCHSD2O94868 740 aa15.08■□□□□ 0
LCN2-206ENST00000488391 PHKG2P15735 406 aa15.08■□□□□ 0
LCN2-206ENST00000488391 HTRA3P83110 453 aa15.08■□□□□ 0
LCN2-206ENST00000488391 IFNL2Q8IZJ0 200 aa15.08■□□□□ 0
LCN2-206ENST00000488391 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
LCN2-206ENST00000488391 PKD1L3Q7Z443 1732 aa15.08■□□□□ 0
LCN2-206ENST00000488391 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
LCN2-206ENST00000488391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 0
LCN2-206ENST00000488391 CICQ96RK0 1608 aaPredicted RBP15.06■□□□□ 0
LCN2-206ENST00000488391 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
LCN2-206ENST00000488391 C16orf71Q8IYS4 520 aaPredicted RBP15.06■□□□□ 0
LCN2-206ENST00000488391 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
LCN2-206ENST00000488391 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
LCN2-206ENST00000488391 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
LCN2-206ENST00000488391 RFC4P35249 363 aa15.05■□□□□ -0
LCN2-206ENST00000488391 PARP3Q9Y6F1 533 aa15.05■□□□□ -0
LCN2-206ENST00000488391 WASHC2AQ641Q2 1341 aa15.05■□□□□ -0
LCN2-206ENST00000488391 KIF13BQ9NQT8 1826 aa15.05■□□□□ -0
LCN2-206ENST00000488391 KIAA1551Q9HCM1 1747 aa15.04■□□□□ -0
LCN2-206ENST00000488391 NCAPD2Q15021 1401 aa15.04■□□□□ -0
LCN2-206ENST00000488391 GYS1P13807 737 aa15.04■□□□□ -0
LCN2-206ENST00000488391 KCNA3P22001 575 aa15.04■□□□□ -0
LCN2-206ENST00000488391 COL13A1Q5TAT6 717 aaPredicted RBP15.04■□□□□ -0
LCN2-206ENST00000488391 RBM46Q8TBY0 533 aaKnown RBP15.04■□□□□ -0
LCN2-206ENST00000488391 RPS6KA4O75676 772 aa15.03■□□□□ -0
LCN2-206ENST00000488391 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -0
LCN2-206ENST00000488391 CDCA8Q53HL2 280 aa15.03■□□□□ -0
LCN2-206ENST00000488391 RC3H1Q5TC82 1133 aaKnown RBP15.03■□□□□ -0
LCN2-206ENST00000488391 C10orf71Q711Q0 1435 aa15.02■□□□□ -0
LCN2-206ENST00000488391 KLRG1Q96E93 195 aa15.02■□□□□ -0
LCN2-206ENST00000488391 PIM2Q9P1W9 311 aa15.02■□□□□ -0
LCN2-206ENST00000488391 POLKQ9UBT6 870 aa15.02■□□□□ -0
LCN2-206ENST00000488391 CAPN15O75808 1086 aa15.01□□□□□ -0.01
LCN2-206ENST00000488391 ADRA2BP18089 450 aa15.01□□□□□ -0.01
LCN2-206ENST00000488391 RRAGCQ9HB90 399 aa15.01□□□□□ -0.01
LCN2-206ENST00000488391 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
LCN2-206ENST00000488391 TNNT2P45379 298 aaPredicted RBP15□□□□□ -0.01
LCN2-206ENST00000488391 EIF4A2Q14240 407 aaKnown RBP15□□□□□ -0.01
LCN2-206ENST00000488391 RNF181Q9P0P0 153 aa15□□□□□ -0.01
LCN2-206ENST00000488391 WDR90Q96KV7 1748 aa15□□□□□ -0.01
LCN2-206ENST00000488391 KDRP35968 1356 aa14.99□□□□□ -0.01
LCN2-206ENST00000488391 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
LCN2-206ENST00000488391 PTCD1O75127 700 aaKnown RBP14.99□□□□□ -0.01
LCN2-206ENST00000488391 FSTL1Q12841 308 aa14.99□□□□□ -0.01
LCN2-206ENST00000488391 DALRD3Q5D0E6 543 aaKnown RBP14.99□□□□□ -0.01
LCN2-206ENST00000488391 JMYQ8N9B5 988 aa14.99□□□□□ -0.01
LCN2-206ENST00000488391 SRP68Q9UHB9 627 aaKnown RBP14.99□□□□□ -0.01
LCN2-206ENST00000488391 C4AP0C0L4 1744 aa14.99□□□□□ -0.01
LCN2-206ENST00000488391 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
LCN2-206ENST00000488391 KDM2BQ8NHM5 1336 aa14.98□□□□□ -0.01
LCN2-206ENST00000488391 KCPQ6ZWJ8 1503 aa14.98□□□□□ -0.01
LCN2-206ENST00000488391 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
LCN2-206ENST00000488391 CHRNA5P30532 468 aa14.98□□□□□ -0.01
LCN2-206ENST00000488391 CABP4P57796 275 aa14.98□□□□□ -0.01
LCN2-206ENST00000488391 DCAF5Q96JK2 942 aa14.98□□□□□ -0.01
LCN2-206ENST00000488391 BRCA1P38398 1863 aaKnown RBP14.97□□□□□ -0.01
LCN2-206ENST00000488391 FKBP8Q14318 412 aa14.97□□□□□ -0.01
LCN2-206ENST00000488391 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
LCN2-206ENST00000488391 PLEKHG2Q9H7P9 1386 aa14.97□□□□□ -0.01
LCN2-206ENST00000488391 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.01
LCN2-206ENST00000488391 CRKLP46109 303 aaKnown RBP14.96□□□□□ -0.01
LCN2-206ENST00000488391 DDR1Q08345 913 aa14.96□□□□□ -0.01
LCN2-206ENST00000488391 ZNF530Q6P9A1 599 aaPredicted RBP14.96□□□□□ -0.01
LCN2-206ENST00000488391 ARFGEF1Q9Y6D6 1849 aa14.96□□□□□ -0.01
LCN2-206ENST00000488391 TNS4Q8IZW8 715 aa14.95□□□□□ -0.02
LCN2-206ENST00000488391 MTHFSP49914 203 aa14.94□□□□□ -0.02
LCN2-206ENST00000488391 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
LCN2-206ENST00000488391 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
LCN2-206ENST00000488391 COL5A3P25940 1745 aaPredicted RBP14.94□□□□□ -0.02
LCN2-206ENST00000488391 ANKRD26Q9UPS8 1709 aa14.94□□□□□ -0.02
LCN2-206ENST00000488391 USP42Q9H9J4 1324 aaKnown RBP14.93□□□□□ -0.02
LCN2-206ENST00000488391 SBF1O95248 1867 aa14.93□□□□□ -0.02
LCN2-206ENST00000488391 SMC1BQ8NDV3 1235 aa14.93□□□□□ -0.02
LCN2-206ENST00000488391 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
LCN2-206ENST00000488391 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
LCN2-206ENST00000488391 TM4SF1P30408 202 aa14.92□□□□□ -0.02
LCN2-206ENST00000488391 RASSF7Q02833 373 aa14.92□□□□□ -0.02
LCN2-206ENST00000488391 KDM6AO15550 1401 aaPredicted RBP14.92□□□□□ -0.02
LCN2-206ENST00000488391 AMOTQ4VCS5 1084 aa14.91□□□□□ -0.02
LCN2-206ENST00000488391 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
LCN2-206ENST00000488391 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
LCN2-206ENST00000488391 INTS5Q6P9B9 1019 aaKnown RBP14.91□□□□□ -0.02
LCN2-206ENST00000488391 ZPR1O75312 459 aa14.9□□□□□ -0.02
LCN2-206ENST00000488391 PRELPP51888 382 aa14.9□□□□□ -0.02
LCN2-206ENST00000488391 USPL1Q5W0Q7 1092 aa14.9□□□□□ -0.02
LCN2-206ENST00000488391 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
LCN2-206ENST00000488391 VEGFAP15692 232 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms