RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 KDRP35968 1356 aa24.64■■□□□ 1.53
MMP11-210ENST00000488363 ATP6V1AP38606 617 aa24.63■■□□□ 1.53
MMP11-210ENST00000488363 KDM6AO15550 1401 aaPredicted RBP24.62■■□□□ 1.53
MMP11-210ENST00000488363 PHF14O94880 888 aa24.62■■□□□ 1.53
MMP11-210ENST00000488363 ITPK1Q13572 414 aa24.62■■□□□ 1.53
MMP11-210ENST00000488363 AMIGO3Q86WK7 504 aa24.62■■□□□ 1.53
MMP11-210ENST00000488363 CABP4P57796 275 aa24.61■■□□□ 1.53
MMP11-210ENST00000488363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.6■■□□□ 1.53
MMP11-210ENST00000488363 SMIM5Q71RC9 77 aa24.6■■□□□ 1.53
MMP11-210ENST00000488363 UBR3Q6ZT12 1888 aa24.6■■□□□ 1.53
MMP11-210ENST00000488363 SSFA2P28290 1259 aa24.59■■□□□ 1.53
MMP11-210ENST00000488363 GPR162Q16538 588 aa24.59■■□□□ 1.53
MMP11-210ENST00000488363 NPC1L1Q9UHC9 1359 aa24.58■■□□□ 1.53
MMP11-210ENST00000488363 NLGN2Q8NFZ4 835 aa24.58■■□□□ 1.53
MMP11-210ENST00000488363 RBM42Q9BTD8 480 aaKnown RBP24.58■■□□□ 1.53
MMP11-210ENST00000488363 GNPATO15228 680 aa24.57■■□□□ 1.52
MMP11-210ENST00000488363 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
MMP11-210ENST00000488363 DIAPH1O60610 1272 aaKnown RBP24.55■■□□□ 1.52
MMP11-210ENST00000488363 HMOX1P09601 288 aa24.55■■□□□ 1.52
MMP11-210ENST00000488363 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
MMP11-210ENST00000488363 SLC4A9Q96Q91 983 aa24.55■■□□□ 1.52
MMP11-210ENST00000488363 AKAP4Q5JQC9 854 aa24.54■■□□□ 1.52
MMP11-210ENST00000488363 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
MMP11-210ENST00000488363 GOLGB1Q14789 3259 aaKnown RBP24.52■■□□□ 1.52
MMP11-210ENST00000488363 ZNF831Q5JPB2 1677 aa24.52■■□□□ 1.52
MMP11-210ENST00000488363 CD2APQ9Y5K6 639 aa24.51■■□□□ 1.51
MMP11-210ENST00000488363 PTCD1O75127 700 aaKnown RBP24.5■■□□□ 1.51
MMP11-210ENST00000488363 RC3H1Q5TC82 1133 aaKnown RBP24.5■■□□□ 1.51
MMP11-210ENST00000488363 RTCBQ9Y3I0 505 aaKnown RBP24.5■■□□□ 1.51
MMP11-210ENST00000488363 CHD4Q14839 1912 aa24.49■■□□□ 1.51
MMP11-210ENST00000488363 TRAPPC3LQ5T215 181 aa24.48■■□□□ 1.51
MMP11-210ENST00000488363 CNTNAP4Q9C0A0 1308 aa24.48■■□□□ 1.51
MMP11-210ENST00000488363 SCN11AQ9UI33 1791 aa24.48■■□□□ 1.51
MMP11-210ENST00000488363 COL3A1P02461 1466 aaPredicted RBP24.47■■□□□ 1.51
MMP11-210ENST00000488363 LGR6Q9HBX8 967 aa24.47■■□□□ 1.51
MMP11-210ENST00000488363 MTHFSDQ2M296 383 aaKnown RBP24.46■■□□□ 1.51
MMP11-210ENST00000488363 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
MMP11-210ENST00000488363 COL5A3P25940 1745 aaPredicted RBP24.46■■□□□ 1.51
MMP11-210ENST00000488363 U2SURPO15042 1029 aaKnown RBP24.45■■□□□ 1.5
MMP11-210ENST00000488363 RNMTO43148 476 aaKnown RBP24.45■■□□□ 1.5
MMP11-210ENST00000488363 ADRA2BP18089 450 aa24.45■■□□□ 1.5
MMP11-210ENST00000488363 ZNF784Q8NCA9 323 aaPredicted RBP24.45■■□□□ 1.5
MMP11-210ENST00000488363 RPS6KA4O75676 772 aa24.44■■□□□ 1.5
MMP11-210ENST00000488363 YBX3P16989 372 aaKnown RBP eCLIP24.44■■□□□ 1.5
MMP11-210ENST00000488363 ARHGEF1Q92888 912 aaKnown RBP24.44■■□□□ 1.5
MMP11-210ENST00000488363 GRIN3BO60391 1043 aa24.43■■□□□ 1.5
MMP11-210ENST00000488363 MRC1P22897 1456 aa24.42■■□□□ 1.5
MMP11-210ENST00000488363 MMP10P09238 476 aa24.41■■□□□ 1.5
MMP11-210ENST00000488363 RFC4P35249 363 aa24.41■■□□□ 1.5
MMP11-210ENST00000488363 CRKLP46109 303 aaKnown RBP24.41■■□□□ 1.5
MMP11-210ENST00000488363 MYH14Q7Z406 1995 aaKnown RBP24.4■■□□□ 1.5
MMP11-210ENST00000488363 NLGN1Q8N2Q7 840 aa24.4■■□□□ 1.5
MMP11-210ENST00000488363 CFAP53Q96M91 514 aa24.4■■□□□ 1.5
MMP11-210ENST00000488363 TJP1Q07157 1748 aa24.38■■□□□ 1.49
MMP11-210ENST00000488363 GYS1P13807 737 aa24.38■■□□□ 1.49
MMP11-210ENST00000488363 SLC39A6Q13433 755 aa24.38■■□□□ 1.49
MMP11-210ENST00000488363 CICQ96RK0 1608 aaPredicted RBP24.38■■□□□ 1.49
MMP11-210ENST00000488363 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
MMP11-210ENST00000488363 GAS2L2Q8NHY3 880 aa24.37■■□□□ 1.49
MMP11-210ENST00000488363 VIRMAQ69YN4 1812 aaKnown RBP24.36■■□□□ 1.49
MMP11-210ENST00000488363 DNAJC10Q8IXB1 793 aa24.36■■□□□ 1.49
MMP11-210ENST00000488363 INTS5Q6P9B9 1019 aaKnown RBP24.35■■□□□ 1.49
MMP11-210ENST00000488363 PPP2R1AP30153 589 aa24.34■■□□□ 1.49
MMP11-210ENST00000488363 C4AP0C0L4 1744 aa24.33■■□□□ 1.49
MMP11-210ENST00000488363 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
MMP11-210ENST00000488363 CCDC87Q9NVE4 849 aa24.33■■□□□ 1.49
MMP11-210ENST00000488363 WWC3Q9ULE0 1092 aa24.33■■□□□ 1.49
MMP11-210ENST00000488363 NUDCQ9Y266 331 aa24.33■■□□□ 1.49
MMP11-210ENST00000488363 KCPQ6ZWJ8 1503 aa24.33■■□□□ 1.49
MMP11-210ENST00000488363 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
MMP11-210ENST00000488363 PARP3Q9Y6F1 533 aa24.32■■□□□ 1.48
MMP11-210ENST00000488363 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
MMP11-210ENST00000488363 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
MMP11-210ENST00000488363 TEFQ10587 303 aa24.31■■□□□ 1.48
MMP11-210ENST00000488363 IL17REQ8NFR9 667 aa24.31■■□□□ 1.48
MMP11-210ENST00000488363 RSPH6AQ9H0K4 717 aa24.31■■□□□ 1.48
MMP11-210ENST00000488363 USP42Q9H9J4 1324 aaKnown RBP24.31■■□□□ 1.48
MMP11-210ENST00000488363 TTC5Q8N0Z6 440 aa24.3■■□□□ 1.48
MMP11-210ENST00000488363 VSIG10Q8N0Z9 540 aa24.3■■□□□ 1.48
MMP11-210ENST00000488363 C10orf71Q711Q0 1435 aa24.29■■□□□ 1.48
MMP11-210ENST00000488363 PHACTR3Q96KR7 559 aa24.29■■□□□ 1.48
MMP11-210ENST00000488363 SOS1Q07889 1333 aaPredicted RBP24.29■■□□□ 1.48
MMP11-210ENST00000488363 U2AF1L5P0DN76 240 aaPredicted RBP24.28■■□□□ 1.48
MMP11-210ENST00000488363 TGFB2P61812 414 aa24.28■■□□□ 1.48
MMP11-210ENST00000488363 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.48
MMP11-210ENST00000488363 FKBP8Q14318 412 aa24.28■■□□□ 1.48
MMP11-210ENST00000488363 KIF13BQ9NQT8 1826 aa24.28■■□□□ 1.48
MMP11-210ENST00000488363 PXDNLA1KZ92 1463 aa24.27■■□□□ 1.48
MMP11-210ENST00000488363 ZPR1O75312 459 aa24.26■■□□□ 1.47
MMP11-210ENST00000488363 ZBTB1Q9Y2K1 713 aa24.26■■□□□ 1.47
MMP11-210ENST00000488363 UBR2Q8IWV8 1755 aa24.26■■□□□ 1.47
MMP11-210ENST00000488363 ZNF790Q6PG37 636 aa24.25■■□□□ 1.47
MMP11-210ENST00000488363 A0A0G2JLW4 131 aa24.24■■□□□ 1.47
MMP11-210ENST00000488363 USPL1Q5W0Q7 1092 aa24.24■■□□□ 1.47
MMP11-210ENST00000488363 CEMIPQ8WUJ3 1361 aa24.24■■□□□ 1.47
MMP11-210ENST00000488363 FCHSD2O94868 740 aa24.23■■□□□ 1.47
MMP11-210ENST00000488363 STARD3NLO95772 234 aa24.23■■□□□ 1.47
MMP11-210ENST00000488363 DDR1Q08345 913 aa24.23■■□□□ 1.47
MMP11-210ENST00000488363 ZNF496Q96IT1 587 aaPredicted RBP24.23■■□□□ 1.47
MMP11-210ENST00000488363 COL15A1P39059 1388 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms